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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945435
Clone id YMU02A01NGRL0009_F02
Library
Length 364
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_F02. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AGGCTGGTTGTGTTGGCTTTAAACCTTAGCATTTGGATAAGAATGGAAGAAAGATCGTGA
AACTGCTGCTGCGACTACGTGTAGCATAATCGAGCATTTTCTTGGTGGAATCTTCAAATA
ATGTTCTTGAGTTGATTTGTTCTTGGAAATGTATGGATTATGCACACTGGCTGTGCTTTT
GTTTTCAACACTCCATTTGGACTCATTTGCTGCAGGGAGTGGTGCACTAGCTTTTGATTT
ACTGTTCAAGAGAAGGGGATCAACAAGGCCATAGTAGCTGTGTTTGTGGGCTATTGAGTT
CATGTACCATCACGTTTTAATCAGAAGTCTAAACTAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA
■■Homology search results ■■ -
sp_hit_id Q8TD46
Definition sp|Q8TD46|MO2R1_HUMAN Cell surface glycoprotein CD200 receptor 1 OS=Homo sapiens
Align length 40
Score (bit) 30.4
E-value 2.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945435|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_F02, 5'
         (335 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8TD46|MO2R1_HUMAN Cell surface glycoprotein CD200 receptor 1...    30   2.9  

>sp|Q8TD46|MO2R1_HUMAN Cell surface glycoprotein CD200 receptor 1
           OS=Homo sapiens GN=CD200R1 PE=1 SV=2
          Length = 325

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -3

Query: 195 WSVENKSTASVHNPYISKNKSTQEHYLKIPPRKCSIMLHV 76
           W V N ST + H  +++ NKS     L +P  K S  L++
Sbjct: 206 WEVHNVSTVTCHVSHLTGNKSLYIELLPVPGAKKSAKLYI 245
tr_hit_id Q113K6
Definition tr|Q113K6|Q113K6_TRIEI Putative uncharacterized protein OS=Trichodesmium erythraeum (strain IMS101)
Align length 42
Score (bit) 33.5
E-value 5.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945435|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_F02, 5'
         (335 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q113K6|Q113K6_TRIEI Putative uncharacterized protein OS=Trich...    33   5.5  

>tr|Q113K6|Q113K6_TRIEI Putative uncharacterized protein
           OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2077
           PE=4 SV=1
          Length = 636

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = -1

Query: 218 SLQQMSPNGVLKTKAQPVCIIHTF--PRTNQLKNII*RFHQE 99
           S +++ PN  +KTK+QP   IHTF  P+ N+   II R   E
Sbjct: 345 SQRKLEPNSQIKTKSQPKITIHTFATPKVNRKGEIISRSEGE 386