DK945439 |
Clone id |
YMU02A01NGRL0009_F06 |
Library |
YMU02 |
Length |
433 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_F06. 5' end sequence. |
Accession |
DK945439 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL1262Contig1 |
Sequence |
GTGCATATATTGAAACCTGGTTATGGTGCATATGTTGCCAGCAAAGCTGCTGTAGAAACC CTAACCAAGATGCTAGCGAAGGAGCTTAAAGGGAGAAGAATTACAGCAAACTGTGTTGCA CCCGGACCTGTTGCCACGGAGTTGTTCTACGCAGGTAAGGATGAGGCTACAATACAGGCC ATGCGCGAGGCGCCGCCTCTGGAAAGGTTGGGCGAGCCAGACGACATTGCCTCCCTCATA CTGTTCCTTGTGAGTGAGGGAGGTGAATGGGTGGATGGGCAGGTGATCCGAGCTAATGGG GGGTTCGCCATCTGAATAAAATTTATCTCTGCGTTTGTGATACAGAGGTTGGATTTTGTA CTTTGCCAGGATCAAGTTCAGAAGTAGCAGTCTTTTTCTTGATAAAAAAAAAAAAAAAAA AAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q08632 |
Definition |
sp|Q08632|SDR1_PICAB Short-chain type dehydrogenase/reductase OS=Picea abies |
Align length |
96 |
Score (bit) |
129.0 |
E-value |
3.0e-30 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9SVQ9 |
Definition |
tr|Q9SVQ9|Q9SVQ9_ARATH Short-chain alcohol dehydrogenase like protein OS=Arabidopsis thaliana |
Align length |
101 |
Score (bit) |
144.0 |
E-value |
3.0e-33 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945439|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0009_F06, 5' (403 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9SVQ9|Q9SVQ9_ARATH Short-chain alcohol dehydrogenase like pr... 144 3e-33 tr|A7PW62|A7PW62_VITVI Chromosome chr8 scaffold_34, whole genome... 140 3e-32 tr|A7PW64|A7PW64_VITVI Chromosome chr8 scaffold_34, whole genome... 137 3e-31 tr|Q6ZZK5|Q6ZZK5_ACTTI Short chain dehydrogenase OS=Actinoplanes... 134 3e-30 tr|A9NSE2|A9NSE2_PICSI Putative uncharacterized protein OS=Picea... 132 9e-30 tr|A9NWA9|A9NWA9_PICSI Putative uncharacterized protein OS=Picea... 132 1e-29 tr|A4X7H0|A4X7H0_SALTO Short-chain dehydrogenase/reductase SDR O... 130 4e-29 tr|Q9FK50|Q9FK50_ARATH Brn1-like protein OS=Arabidopsis thaliana... 130 4e-29 tr|A6SZL1|A6SZL1_JANMA Short-chain dehydrogenase OS=Janthinobact... 129 6e-29 tr|B1T115|B1T115_9BURK Short-chain dehydrogenase/reductase SDR O... 129 6e-29 tr|Q69LD4|Q69LD4_ORYSJ Putative short-chain dehydrogenase/reduct... 129 6e-29 tr|B8B7M3|B8B7M3_ORYSI Putative uncharacterized protein OS=Oryza... 129 6e-29 tr|B1YXM6|B1YXM6_BURA4 Short-chain dehydrogenase/reductase SDR O... 127 3e-28 tr|B1G597|B1G597_9BURK Short-chain dehydrogenase/reductase SDR O... 127 3e-28 tr|A9I019|A9I019_BORPD Putative short chain dehydrogenase OS=Bor... 127 4e-28 tr|Q9SQR4|Q9SQR4_ARATH Putative short-chain type dehydrogenase/r... 127 4e-28 tr|Q94F44|Q94F44_ARATH AT3g03980/T11I18_9 OS=Arabidopsis thalian... 127 4e-28 tr|Q4KK35|Q4KK35_PSEF5 3-oxoacyl-(Acyl-carrier-protein) reductas... 126 6e-28 tr|B5WQD4|B5WQD4_9BURK Short-chain dehydrogenase/reductase SDR O... 125 1e-27 tr|Q5SMM7|Q5SMM7_ORYSJ Putative short-chain alcohol dehydrogenas... 125 1e-27 tr|Q0DE10|Q0DE10_ORYSJ Os06g0185100 protein OS=Oryza sativa subs... 125 1e-27 tr|A2YA29|A2YA29_ORYSI Putative uncharacterized protein OS=Oryza... 125 1e-27 tr|Q471E5|Q471E5_RALEJ Short-chain dehydrogenase/reductase SDR O... 124 2e-27 tr|A9HPP5|A9HPP5_GLUDA Putative oxidoreductase protein OS=Glucon... 124 2e-27 tr|B5ZFC7|B5ZFC7_GLUDA Short-chain dehydrogenase/reductase SDR O... 124 2e-27 tr|Q89N22|Q89N22_BRAJA Short chain dehydrogenase OS=Bradyrhizobi... 124 3e-27 tr|Q141M2|Q141M2_BURXL Putative short-chain dehydrogenase OS=Bur... 123 4e-27 tr|B2JCR6|B2JCR6_BURP8 Short-chain dehydrogenase/reductase SDR O... 123 4e-27 tr|Q1YGS0|Q1YGS0_MOBAS Short chain dehydrogenase family protein ... 123 4e-27 tr|Q4IWN6|Q4IWN6_AZOVI Short-chain dehydrogenase/reductase SDR O... 123 5e-27
>tr|Q9SVQ9|Q9SVQ9_ARATH Short-chain alcohol dehydrogenase like protein OS=Arabidopsis thaliana GN=AT4g13180 PE=2 SV=1 Length = 263
Score = 144 bits (362), Expect = 3e-33 Identities = 66/101 (65%), Positives = 81/101 (80%) Frame = +1
Query: 10 LKPGYGAYVASKAAVETLTKMLAKELKGRRITANCVAPGPVATELFYAGKDEATIQAMRE 189 L PGYG Y ASKAAVET+ K+LAKELKG RITANCVAPGPVATE+FYAGK + T++ + Sbjct: 163 LAPGYGVYAASKAAVETMVKVLAKELKGSRITANCVAPGPVATEMFYAGKSDETVKMLAG 222
Query: 190 APPLERLGEPDDIASLILFLVSEGGEWVDGQVIRANGGFAI 312 A P+ R+GE DI ++ FL +GGEW++GQVIRANGGF + Sbjct: 223 ACPMGRIGESKDITEIVGFLAGDGGEWINGQVIRANGGFVV 263
>tr|A7PW62|A7PW62_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025486001 PE=3 SV=1 Length = 248
Score = 140 bits (353), Expect = 3e-32 Identities = 64/104 (61%), Positives = 82/104 (78%) Frame = +1
Query: 1 VHILKPGYGAYVASKAAVETLTKMLAKELKGRRITANCVAPGPVATELFYAGKDEATIQA 180 V L PGY AY ASKAAVET+TK+LAKELKG +TANCVAPGP+ATE+F+ GK E I+ Sbjct: 145 VAALTPGYAAYAASKAAVETMTKILAKELKGTSVTANCVAPGPIATEMFFEGKSEELIKR 204
Query: 181 MREAPPLERLGEPDDIASLILFLVSEGGEWVDGQVIRANGGFAI 312 + +A P+ RLGEP D+ L+ FL ++ GEW++GQ+IR NGGFA+ Sbjct: 205 LVDACPMGRLGEPKDVTQLVGFLATDAGEWINGQIIRINGGFAV 248
>tr|A7PW64|A7PW64_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025488001 PE=3 SV=1 Length = 250
Score = 137 bits (345), Expect = 3e-31 Identities = 62/99 (62%), Positives = 80/99 (80%) Frame = +1
Query: 10 LKPGYGAYVASKAAVETLTKMLAKELKGRRITANCVAPGPVATELFYAGKDEATIQAMRE 189 LKPG+GAY ASKAAVET+ K++AKELKG IT NCVAPGP+AT++F++GK E ++ E Sbjct: 151 LKPGFGAYAASKAAVETMAKIMAKELKGTGITVNCVAPGPIATDMFFSGKSEEDVKKAIE 210
Query: 190 APPLERLGEPDDIASLILFLVSEGGEWVDGQVIRANGGF 306 PL RLGE D+AS++ FL S+GGEWV+GQV+R NGG+ Sbjct: 211 DSPLSRLGETKDVASVVGFLASDGGEWVNGQVVRVNGGY 249
>tr|Q6ZZK5|Q6ZZK5_ACTTI Short chain dehydrogenase OS=Actinoplanes teichomyceticus GN=tei9 PE=3 SV=1 Length = 244
Score = 134 bits (336), Expect = 3e-30 Identities = 62/96 (64%), Positives = 75/96 (78%) Frame = +1
Query: 16 PGYGAYVASKAAVETLTKMLAKELKGRRITANCVAPGPVATELFYAGKDEATIQAMREAP 195 PGYGAY ASK AVE +T +LA+E++GR IT N VAPGP ATELF GKDEAT++ + + P Sbjct: 147 PGYGAYAASKGAVEAMTLILAREMRGRDITVNTVAPGPTATELFLEGKDEATVEHLAKQP 206
Query: 196 PLERLGEPDDIASLILFLVSEGGEWVDGQVIRANGG 303 PLERLG P DIA ++ FL GG WV+GQV+RANGG Sbjct: 207 PLERLGTPADIAGVVAFLAGPGGRWVNGQVLRANGG 242
>tr|A9NSE2|A9NSE2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 264
Score = 132 bits (332), Expect = 9e-30 Identities = 60/101 (59%), Positives = 82/101 (81%) Frame = +1
Query: 1 VHILKPGYGAYVASKAAVETLTKMLAKELKGRRITANCVAPGPVATELFYAGKDEATIQA 180 V +L PG+GAY ASKAA+E +T++LA+EL+G +ITANCVAPGPVAT++F AG+ EA ++A Sbjct: 162 VGMLTPGFGAYKASKAAMEMMTRILAQELRGTQITANCVAPGPVATDMFLAGRSEAEVEA 221
Query: 181 MREAPPLERLGEPDDIASLILFLVSEGGEWVDGQVIRANGG 303 ++ P ERLG +D+A L+ FL S+ GEWV+GQV+R NGG Sbjct: 222 AAKSSPFERLGRVEDVAPLVAFLASDEGEWVNGQVVRVNGG 262
>tr|A9NWA9|A9NWA9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 268
Score = 132 bits (331), Expect = 1e-29 Identities = 59/101 (58%), Positives = 81/101 (80%) Frame = +1
Query: 1 VHILKPGYGAYVASKAAVETLTKMLAKELKGRRITANCVAPGPVATELFYAGKDEATIQA 180 V + +PG+GAY ASKAAVE +T++LA+EL+G ITANCVAPGPVAT++FYAGK +A I+ Sbjct: 166 VGLARPGFGAYAASKAAVEMMTRILAQELRGTNITANCVAPGPVATDMFYAGKSDAAIEV 225
Query: 181 MREAPPLERLGEPDDIASLILFLVSEGGEWVDGQVIRANGG 303 ++ P ERLG+ +D+A L+ FL S+ GEW++ QV+R NGG Sbjct: 226 GVKSSPFERLGKVEDVAPLVAFLASDQGEWINAQVVRVNGG 266
>tr|A4X7H0|A4X7H0_SALTO Short-chain dehydrogenase/reductase SDR OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=Strop_2373 PE=3 SV=1 Length = 261
Score = 130 bits (326), Expect = 4e-29 Identities = 61/96 (63%), Positives = 72/96 (75%) Frame = +1
Query: 16 PGYGAYVASKAAVETLTKMLAKELKGRRITANCVAPGPVATELFYAGKDEATIQAMREAP 195 P YGAY ASK AVE LT +LA+EL+GR +TAN VAPGP AT+LF GKDE TI + P Sbjct: 164 PNYGAYSASKGAVEALTLILARELRGRHVTANAVAPGPTATDLFLDGKDEETIARLAAQP 223
Query: 196 PLERLGEPDDIASLILFLVSEGGEWVDGQVIRANGG 303 PLERLG P DIA ++ FL S G W++GQV+RANGG Sbjct: 224 PLERLGTPSDIAEVVAFLASPAGHWINGQVVRANGG 259
>tr|Q9FK50|Q9FK50_ARATH Brn1-like protein OS=Arabidopsis thaliana PE=3 SV=1 Length = 261
Score = 130 bits (326), Expect = 4e-29 Identities = 64/99 (64%), Positives = 76/99 (76%) Frame = +1
Query: 10 LKPGYGAYVASKAAVETLTKMLAKELKGRRITANCVAPGPVATELFYAGKDEATIQAMRE 189 L PG GAY ASKAAVE + K+LAKELKG ITANCV+PGPVATE+F+ GK E T+ + E Sbjct: 161 LIPGQGAYTASKAAVEAMVKILAKELKGLGITANCVSPGPVATEMFFDGKSEETVMNIIE 220
Query: 190 APPLERLGEPDDIASLILFLVSEGGEWVDGQVIRANGGF 306 P RLGE DIAS++ FL S+GGEW++GQVI ANG F Sbjct: 221 RSPFGRLGETKDIASVVGFLASDGGEWINGQVIVANGAF 259
>tr|A6SZL1|A6SZL1_JANMA Short-chain dehydrogenase OS=Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis) GN=mma_2018 PE=3 SV=1 Length = 246
Score = 129 bits (325), Expect = 6e-29 Identities = 60/98 (61%), Positives = 73/98 (74%) Frame = +1
Query: 16 PGYGAYVASKAAVETLTKMLAKELKGRRITANCVAPGPVATELFYAGKDEATIQAMREAP 195 P Y Y SKAAVE LT + AKE++GR IT N VAPGPVAT+LF+ GK EA IQ + P Sbjct: 149 PNYSVYTGSKAAVEVLTPIFAKEMRGRNITVNAVAPGPVATDLFFNGKTEAQIQQLANMP 208
Query: 196 PLERLGEPDDIASLILFLVSEGGEWVDGQVIRANGGFA 309 PL+RLG+PDDIA+ + FLV G W++GQV+RANGG A Sbjct: 209 PLQRLGQPDDIAAAVSFLVGRDGGWINGQVLRANGGLA 246
>tr|B1T115|B1T115_9BURK Short-chain dehydrogenase/reductase SDR OS=Burkholderia ambifaria MEX-5 GN=BamMEX5DRAFT_1481 PE=4 SV=1 Length = 245
Score = 129 bits (325), Expect = 6e-29 Identities = 59/98 (60%), Positives = 75/98 (76%) Frame = +1
Query: 16 PGYGAYVASKAAVETLTKMLAKELKGRRITANCVAPGPVATELFYAGKDEATIQAMREAP 195 PGYGAY+ASKA + L ++LA E++GRRIT N VAPGPVATELF GK + I+ + Sbjct: 148 PGYGAYIASKAGGDGLVRVLANEMRGRRITVNAVAPGPVATELFLKGKTDEQIERLAHLA 207
Query: 196 PLERLGEPDDIASLILFLVSEGGEWVDGQVIRANGGFA 309 PLERLG+PDDIA + FLV E G+W++GQ++ ANGGFA Sbjct: 208 PLERLGQPDDIAGTVAFLVGEDGQWINGQILYANGGFA 245
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