DK945447 |
Clone id |
YMU02A01NGRL0009_F17 |
Library |
YMU02 |
Length |
390 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_F17. 5' end sequence. |
Accession |
DK945447 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL15Contig1 |
Sequence |
GTATGACAACGCTGTGGCTATTCCTGCTGGAGGTGCTGGTGATGAGGAAGAGCTAGCGAA AGAGAATAACAAGGATACAACCGCTCTTAATGGGAAAATCACACTCAGTGTTGCTAAAAC CAACCTTGAAACTGGGGAGATTGGTGGTGTCTTTGAAAGTGTTCAGCCTTCTGATACTGA CCTTGGCTCTAAAGCCCCCAAAGATGTGAAGATTCAGGGTATTTGGTATGCTCAAGTAGA GTAGACTGAGAAAACTTGGGGTCTTTCCTTTCGCAAGGCCCTGGCTTGACCCTGTCCTTG TTTCTATATTGTTATGTGAAGCAAAGTTCTGAAAAAAAGGTGCCTGTTCGGCAAACCGAG CGTTCTGAACAAATCCAGACTTGTTGGCCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O49079 |
Definition |
sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis |
Align length |
80 |
Score (bit) |
130.0 |
E-value |
2.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945447|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0009_F17, 5' (353 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chlorop... 130 2e-30 sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloropla... 130 3e-30 sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chlorop... 128 1e-29 sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chlorop... 128 1e-29 sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chlorop... 126 4e-29 sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chlo... 122 4e-28 sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chlo... 122 7e-28 sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chlorop... 121 1e-27 sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chlorop... 113 3e-25 sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1, chlorop... 109 5e-24 sp|Q9SBN6|PSBO_VOLCA Oxygen-evolving enhancer protein 1, chlorop... 105 9e-23 sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer protein 1, chlorop... 102 6e-22 sp|P13907|PSBO_ANASP Photosystem II manganese-stabilizing polype... 94 2e-19 sp|Q9R6W6|PSBO_CYAA5 Photosystem II manganese-stabilizing polype... 82 1e-15 sp|P11472|PSBO_SYNE7 Photosystem II manganese-stabilizing polype... 80 4e-15 sp|P0A431|PSBO_THEEB Photosystem II manganese-stabilizing polype... 78 2e-14 sp|P0A432|PSBO_SYNEN Photosystem II manganese-stabilizing polype... 78 2e-14 sp|P10549|PSBO_SYNY3 Photosystem II manganese-stabilizing polype... 77 2e-14 sp|P84989|PSBO_POPEU Oxygen-evolving enhancer protein 1, chlorop... 53 4e-07 sp|P84718|PSBO_PINST Putative oxygen-evolving enhancer protein 1... 31 2.2 sp|Q9XD84|TIBA_ECOLX Adhesin/invasin tibA OS=Escherichia coli GN... 30 2.8 sp|A5DK47|DBP6_PICGU ATP-dependent RNA helicase DBP6 OS=Pichia g... 30 2.8 sp|O74252|STE12_EMENI Transcription factor steA OS=Emericella ni... 30 4.8 sp|O13359|KEX2_CANAL Kexin OS=Candida albicans GN=KEX2 PE=3 SV=1 29 6.3 sp|P32644|ECM32_YEAST Putative ATP-dependent RNA helicase ECM32 ... 29 6.3 sp|Q54SF5|SLX9_DICDI Putative ribosome biogenesis protein slx9-l... 29 8.2 sp|Q9Y893|FOLE_CANAL Folylpolyglutamate synthase OS=Candida albi... 29 8.2
>sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1 Length = 329
Score = 130 bits (328), Expect = 2e-30 Identities = 63/80 (78%), Positives = 70/80 (87%) Frame = +2
Query: 2 YDNAVAIPAGGAGDEEELAKENNKDTTALNGKITLSVAKTNLETGEIGGVFESVQPSDTD 181 YDNAVA+PAGG GDEEEL KEN KD ++ GKITLSV K+ ETGE+ GVFES+QPSDTD Sbjct: 250 YDNAVALPAGGRGDEEELVKENIKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTD 309
Query: 182 LGSKAPKDVKIQGIWYAQVE 241 LGSKAPKDVKIQGIWYAQ+E Sbjct: 310 LGSKAPKDVKIQGIWYAQLE 329
>sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1 Length = 329
Score = 130 bits (326), Expect = 3e-30 Identities = 61/80 (76%), Positives = 69/80 (86%) Frame = +2
Query: 2 YDNAVAIPAGGAGDEEELAKENNKDTTALNGKITLSVAKTNLETGEIGGVFESVQPSDTD 181 YDNAVA+PAGG GDEEEL KENNK + GKITLSV +T ETGE+ GVFES+QPSDTD Sbjct: 249 YDNAVALPAGGRGDEEELGKENNKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTD 308
Query: 182 LGSKAPKDVKIQGIWYAQVE 241 LG+KAPKDVKIQG+WYAQ+E Sbjct: 309 LGAKAPKDVKIQGVWYAQLE 328
>sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1 Length = 333
Score = 128 bits (321), Expect = 1e-29 Identities = 60/80 (75%), Positives = 70/80 (87%) Frame = +2
Query: 2 YDNAVAIPAGGAGDEEELAKENNKDTTALNGKITLSVAKTNLETGEIGGVFESVQPSDTD 181 YDNAVA+PAGG GDEEEL KEN K+T +L GKIT +V K+N +TGE+ GVFES+QPSDTD Sbjct: 253 YDNAVALPAGGRGDEEELQKENVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTD 312
Query: 182 LGSKAPKDVKIQGIWYAQVE 241 LG+K PKDVKIQGIWYAQ+E Sbjct: 313 LGAKTPKDVKIQGIWYAQLE 332
>sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2 Length = 329
Score = 128 bits (321), Expect = 1e-29 Identities = 61/80 (76%), Positives = 70/80 (87%) Frame = +2
Query: 2 YDNAVAIPAGGAGDEEELAKENNKDTTALNGKITLSVAKTNLETGEIGGVFESVQPSDTD 181 YDNAVA+PAGG GDEEEL KEN K+T +L GKITLSV ++ ETGE+ GVFES+QPSDTD Sbjct: 250 YDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTD 309
Query: 182 LGSKAPKDVKIQGIWYAQVE 241 LG+K PKDVKIQGIWYAQ+E Sbjct: 310 LGAKVPKDVKIQGIWYAQLE 329
>sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1 Length = 332
Score = 126 bits (316), Expect = 4e-29 Identities = 60/80 (75%), Positives = 70/80 (87%) Frame = +2
Query: 2 YDNAVAIPAGGAGDEEELAKENNKDTTALNGKITLSVAKTNLETGEIGGVFESVQPSDTD 181 YDNAVA+PAGG GDEEEL KEN K+T++ GKITLSV ++ ETGE+ GVFES+QPSDTD Sbjct: 253 YDNAVALPAGGRGDEEELQKENVKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTD 312
Query: 182 LGSKAPKDVKIQGIWYAQVE 241 LG+K PKDVKIQGIWYAQ+E Sbjct: 313 LGAKVPKDVKIQGIWYAQLE 332
>sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1 Length = 331
Score = 122 bits (307), Expect = 4e-28 Identities = 57/80 (71%), Positives = 68/80 (85%) Frame = +2
Query: 2 YDNAVAIPAGGAGDEEELAKENNKDTTALNGKITLSVAKTNLETGEIGGVFESVQPSDTD 181 YDNAVA+PAGG GDEEEL+KEN K+T A G+ITL + K+ ETGE+ GVFES+QPSDTD Sbjct: 252 YDNAVALPAGGRGDEEELSKENVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTD 311
Query: 182 LGSKAPKDVKIQGIWYAQVE 241 LG+K PKDVKIQG+WY Q+E Sbjct: 312 LGAKVPKDVKIQGVWYGQIE 331
>sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2 Length = 332
Score = 122 bits (305), Expect = 7e-28 Identities = 58/80 (72%), Positives = 67/80 (83%) Frame = +2
Query: 2 YDNAVAIPAGGAGDEEELAKENNKDTTALNGKITLSVAKTNLETGEIGGVFESVQPSDTD 181 YDNAVA+PAGG GDEEEL KEN K+T A G+ITL V K+ ETGE+ GVFES+QPSDTD Sbjct: 253 YDNAVALPAGGRGDEEELVKENVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTD 312
Query: 182 LGSKAPKDVKIQGIWYAQVE 241 LG+K PKDVKIQG+WY Q+E Sbjct: 313 LGAKVPKDVKIQGVWYGQLE 332
>sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1 Length = 332
Score = 121 bits (303), Expect = 1e-27 Identities = 56/80 (70%), Positives = 67/80 (83%) Frame = +2
Query: 2 YDNAVAIPAGGAGDEEELAKENNKDTTALNGKITLSVAKTNLETGEIGGVFESVQPSDTD 181 YDNAVA+PAGG GDEEEL KENNK+ + G ITLSV + ETGE+ GVF+S+QPSDTD Sbjct: 251 YDNAVALPAGGRGDEEELQKENNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTD 310
Query: 182 LGSKAPKDVKIQGIWYAQVE 241 LG+K PKDVKI+G+WYAQ+E Sbjct: 311 LGAKVPKDVKIEGVWYAQLE 330
>sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1 Length = 325
Score = 113 bits (283), Expect = 3e-25 Identities = 57/80 (71%), Positives = 66/80 (82%) Frame = +2
Query: 2 YDNAVAIPAGGAGDEEELAKENNKDTTALNGKITLSVAKTNLETGEIGGVFESVQPSDTD 181 YDNA A+P GG GDEEELAKEN K+ ++ G ITLSV K+ ETGE+ GVFESVQPSDTD Sbjct: 246 YDNAGALPRGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTD 305
Query: 182 LGSKAPKDVKIQGIWYAQVE 241 L +APKDVKIQG+WYAQ+E Sbjct: 306 L--EAPKDVKIQGVWYAQLE 323
>sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1, chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2 Length = 338
Score = 109 bits (272), Expect = 5e-24 Identities = 52/79 (65%), Positives = 61/79 (77%) Frame = +2
Query: 2 YDNAVAIPAGGAGDEEELAKENNKDTTALNGKITLSVAKTNLETGEIGGVFESVQPSDTD 181 YD AVA+PA +GD+EE AKEN+K T A G I VAK N ETGEI GVFES+QPSDTD Sbjct: 258 YDTAVALPA--SGDDEEYAKENSKSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSDTD 315
Query: 182 LGSKAPKDVKIQGIWYAQV 238 LG+K PKD+K G+WYAQ+ Sbjct: 316 LGAKVPKDIKTSGVWYAQI 334
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U1K9 |
Definition |
tr|A9U1K9|A9U1K9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
80 |
Score (bit) |
137.0 |
E-value |
3.0e-31 |
Report |
|