DK945448
Clone id YMU02A01NGRL0009_F18
Library
Length 455
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_F18. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCTTCTGCAAACTATATAGCCATGTCTTCGTGCGGGAGCGGATGCAGCTGCGGTGCTAAC
TGCAGCTGTGGCAGTGGATGCAAGTGTGGTAAGAAGGTGTTTGACGAAACTGCCCTCGAT
GCCCCGAGGGAAGTGACGGTTGCTGGCTGTGCGTGCAGGTGTGGATCTAACTGCCAGTGC
GCCGACCCCTGTCCCTGTGCGCAAACCTCGAGCGGGGATGCTTGCAAGTGCGGTGCGAAC
TGTACCTGCAATCCCTGCAACTGCTGATTATGATCATGATTAGTACTAACTTGCGCCATG
TAGAAATTACCCTGTTGAAAGATGCGATGCACGCATAGGCAAGCATGATGGTATGGCTGT
CTGCTCGCCACTTGCTCCATCTTCATGTATCTTAGAAAGATAAATTTCACTTTTTGCTGG
TAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P43399
Definition sp|P43399|MT1_TRIRP Metallothionein-like protein 1 OS=Trifolium repens
Align length 21
Score (bit) 35.8
E-value 0.07
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945448|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_F18, 5'
(421 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P43399|MT1_TRIRP Metallothionein-like protein 1 OS=Trifolium ... 36 0.070
sp|Q41670|MT1B_VICFA Metallothionein-like protein 1B OS=Vicia fa... 36 0.070
sp|Q43515|MT2Z_SOLLC Metallothionein-like protein type 2 OS=Sola... 35 0.12
sp|P20830|MT1_PEA Metallothionein-like protein 1 OS=Pisum sativu... 35 0.12
sp|Q41669|MT1A_VICFA Metallothionein-like protein 1A OS=Vicia fa... 35 0.12
sp|P55946|MT_ARIAR Metallothionein OS=Arianta arbustorum PE=1 SV=1 35 0.16
sp|Q43512|MT2X_SOLLC Metallothionein-like protein type 2 OS=Sola... 35 0.16
sp|Q40157|MT2A_SOLLC Metallothionein-like protein type 2 A OS=So... 35 0.16
sp|P33187|MTCD_HELPO Cadmium-metallothionein OS=Helix pomatia PE... 34 0.20
sp|Q43513|MT2Y_SOLLC Metallothionein-like protein type 2 OS=Sola... 34 0.20
sp|P43402|MT54_BRANA Metallothionein-like protein LSC54 OS=Brass... 34 0.27
sp|Q38804|MT1C_ARATH Metallothionein-like protein 1C OS=Arabidop... 34 0.27
sp|P20238|MT1_MIMGU Metallothionein-like protein 1 OS=Mimulus gu... 33 0.35
sp|Q54J58|Y7870_DICDI Uncharacterized protein DDB_G0288281 OS=Di... 33 0.60
sp|Q40410|MT2_NICPL Metallothionein-like protein type 2 OS=Nicot... 33 0.60
sp|P69164|MT2_BRARA Metallothionein-like protein type 2 OS=Brass... 33 0.60
sp|P69163|MT22_BRAJU Metallothionein-like protein type 2, MT2-18... 33 0.60
sp|P25860|MT2A_ARATH Metallothionein-like protein 2A OS=Arabidop... 32 0.78
sp|O24528|MT1_FESRU Metallothionein-like protein 1 OS=Festuca ru... 32 0.78
sp|O22319|MT2_MUSAC Metallothionein-like protein type 2 OS=Musa ... 32 1.0
sp|Q39458|MT1_CICAR Metallothionein-like protein 1 OS=Cicer arie... 32 1.0
sp|P23038|MT_CRAVI Metallothionein OS=Crassostrea virginica PE=1... 32 1.3
sp|Q40158|MT2B_SOLLC Metallothionein-like protein type 2 B OS=So... 32 1.3
sp|P37359|MT3_BOVIN Metallothionein-3 OS=Bos taurus GN=MT3 PE=1 ... 31 1.7
sp|Q2MJS5|MT3_BOSMU Metallothionein-3 OS=Bos mutus grunniens GN=... 31 1.7
sp|P80252|MT22_MYTED Metallothionein 20-II OS=Mytilus edulis PE=... 31 1.7
sp|P80251|MT21_MYTED Metallothionein 20-I isoforms A and B OS=My... 31 1.7
sp|Q39511|MT1_CASGL Metallothionein-like protein 1 OS=Casuarina ... 31 1.7
sp|P43392|MT1A_ARATH Metallothionein-like protein 1A OS=Arabidop... 31 1.7
sp|Q94550|MT_DREPO Metallothionein OS=Dreissena polymorpha PE=1 ... 31 2.3

>sp|P43399|MT1_TRIRP Metallothionein-like protein 1 OS=Trifolium
repens GN=MT1B PE=3 SV=1
Length = 75

Score = 35.8 bits (81), Expect = 0.070
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1

Query: 154 CRCGSNCQCADPCPCAQTSSG 216
C CGS+C C D C C + SSG
Sbjct: 4 CNCGSSCNCGDSCKCNKRSSG 24



Score = 32.3 bits (72), Expect = 0.78
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1

Query: 118 DAPREVTVAGCACRCGSNCQCADPCPC 198
DA V C+CGS+C C DPC C
Sbjct: 49 DAEMGVAAEDSGCKCGSSCTC-DPCNC 74


>sp|Q41670|MT1B_VICFA Metallothionein-like protein 1B OS=Vicia faba
GN=MT1B PE=3 SV=1
Length = 75

Score = 35.8 bits (81), Expect = 0.070
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1

Query: 154 CRCGSNCQCADPCPCAQTSSG 216
C CGS+C C D C C + SSG
Sbjct: 4 CNCGSSCNCGDSCKCNKRSSG 24



Score = 30.0 bits (66), Expect = 3.9
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1

Query: 154 CRCGSNCQCADPCPC 198
C+CG NC C DPC C
Sbjct: 61 CKCGDNCTC-DPCNC 74


>sp|Q43515|MT2Z_SOLLC Metallothionein-like protein type 2 OS=Solanum
lycopersicum PE=3 SV=1
Length = 84

Score = 35.0 bits (79), Expect = 0.12
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1

Query: 130 EVTVAGCACRCGSNCQCADPCPCAQTSS 213
+ T G C+CGS+C+C DPC C S+
Sbjct: 55 KATEGGNGCKCGSSCKC-DPCNCCSAST 81


>sp|P20830|MT1_PEA Metallothionein-like protein 1 OS=Pisum sativum
GN=MTA PE=3 SV=1
Length = 75

Score = 35.0 bits (79), Expect = 0.12
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1

Query: 154 CRCGSNCQCADPCPCAQTSSG 216
C CGS+C C D C C + SSG
Sbjct: 4 CGCGSSCNCGDSCKCNKRSSG 24



Score = 30.0 bits (66), Expect = 3.9
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1

Query: 154 CRCGSNCQCADPCPC 198
C+CG NC C DPC C
Sbjct: 61 CKCGDNCTC-DPCNC 74


>sp|Q41669|MT1A_VICFA Metallothionein-like protein 1A OS=Vicia faba
GN=MT1A PE=3 SV=1
Length = 77

Score = 35.0 bits (79), Expect = 0.12
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1

Query: 154 CRCGSNCQCADPCPCAQTSSG 216
C CGS+C C D C C + SSG
Sbjct: 4 CGCGSSCNCGDSCKCNKRSSG 24


>sp|P55946|MT_ARIAR Metallothionein OS=Arianta arbustorum PE=1 SV=1
Length = 66

Score = 34.7 bits (78), Expect = 0.16
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Frame = +1

Query: 154 CRCGSNCQCADPCPCAQ----TSSGDACK 228
C+CGS CQC + C CA + D CK
Sbjct: 18 CQCGSKCQCGEGCACASCKTCNCTSDGCK 46



Score = 30.4 bits (67), Expect = 3.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1

Query: 145 GCACRCGSNCQCADPCPCAQTSSGDAC 225
G C+CG C CA C TS G C
Sbjct: 21 GSKCQCGEGCACASCKTCNCTSDGCKC 47


>sp|Q43512|MT2X_SOLLC Metallothionein-like protein type 2 OS=Solanum
lycopersicum PE=3 SV=1
Length = 72

Score = 34.7 bits (78), Expect = 0.16
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +1

Query: 130 EVTVAGCACRCGSNCQCADPCPC 198
E AG C+CGSNC C DPC C
Sbjct: 51 EEKAAGEGCKCGSNCTC-DPCNC 72


>sp|Q40157|MT2A_SOLLC Metallothionein-like protein type 2 A
OS=Solanum lycopersicum GN=MTA PE=2 SV=1
Length = 72

Score = 34.7 bits (78), Expect = 0.16
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +1

Query: 130 EVTVAGCACRCGSNCQCADPCPC 198
E AG C+CGSNC C DPC C
Sbjct: 51 EEKAAGEGCKCGSNCTC-DPCNC 72


>sp|P33187|MTCD_HELPO Cadmium-metallothionein OS=Helix pomatia PE=1
SV=1
Length = 66

Score = 34.3 bits (77), Expect = 0.20
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Frame = +1

Query: 154 CRCGSNCQCADPCPCAQ----TSSGDACK 228
C+CGS CQC + C CA + D CK
Sbjct: 18 CQCGSKCQCGEGCTCAACKTCNCTSDGCK 46



Score = 30.0 bits (66), Expect = 3.9
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 10/38 (26%)
Frame = +1

Query: 145 GCACRCGSNCQCA---------DPCPCAQTSSG-DACK 228
G C+CG C CA D C C + +G D+CK
Sbjct: 21 GSKCQCGEGCTCAACKTCNCTSDGCKCGKECTGPDSCK 58


>sp|Q43513|MT2Y_SOLLC Metallothionein-like protein type 2 OS=Solanum
lycopersicum PE=3 SV=1
Length = 73

Score = 34.3 bits (77), Expect = 0.20
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1

Query: 130 EVTVAGCACRCGSNCQCADPCPC 198
+ T G C+CGSNC C DPC C
Sbjct: 52 KATEGGNGCKCGSNCTC-DPCNC 73


tr_hit_id A8QMV1
Definition tr|A8QMV1|A8QMV1_AEQIR Metallothionein OS=Aequipecten irradians
Align length 42
Score (bit) 43.5
E-value 0.005
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945448|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_F18, 5'
(421 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8QMV1|A8QMV1_AEQIR Metallothionein OS=Aequipecten irradians ... 44 0.005
tr|Q75NI4|Q75NI4_PHAAU Type 1 metallothionein OS=Phaseolus aureu... 32 0.11
tr|Q75NI0|Q75NI0_PHAAN Type 1 metallothionein OS=Phaseolus angul... 32 0.11
tr|B3VKV7|B3VKV7_SOLNI Type 2 metallothionein OS=Solanum nigrum ... 39 0.17
tr|B3VKV6|B3VKV6_SOLNI Type 2 metallothionein OS=Solanum nigrum ... 38 0.22
tr|Q6PML5|Q6PML5_POPJC Metallothionein 1b (Putative uncharacteri... 32 0.32
tr|B3VKV5|B3VKV5_SOLNI Type 2 metallothionein OS=Solanum nigrum ... 37 0.37
tr|Q6PML6|Q6PML6_POPJC Metallothionein 1a OS=Populus jackii GN=M... 32 0.42
tr|A1Z0P1|A1Z0P1_9ROSI Metallothionein-like protein MT1A OS=Sali... 32 0.42
tr|Q9ZSC6|Q9ZSC6_IPOBA Metallothionein-like type 1 protein OS=Ip... 36 1.1
tr|Q4ZGB4|Q4ZGB4_IPOBA Metallothionein-like type 1 protein OS=Ip... 36 1.1
tr|B8LFH0|B8LFH0_IPOBA Metallothionein-like protein OS=Ipomoea b... 36 1.1
tr|Q2VT53|Q2VT53_CAPAN Metallothionein-like protein type 2 OS=Ca... 35 1.4
tr|Q9SP23|Q9SP23_MEDSA Type 1 metallothionein OS=Medicago sativa... 35 1.8
tr|Q8S3M2|Q8S3M2_AZOFI Metallothionein-like protein 2 OS=Azolla ... 35 1.8
tr|Q75NH8|Q75NH8_VICFA Type 1 metallothionein OS=Vicia faba GN=M... 35 1.8
tr|Q75NH7|Q75NH7_PEA Type 1 metallothionein OS=Pisum sativum GN=... 35 1.8
tr|O22492|O22492_OENJA Metallothionein-1 like protein OS=Oenanth... 35 1.8
tr|B5TGN7|B5TGN7_VICFA Metallothionein OS=Vicia faba PE=4 SV=1 35 1.8
tr|A9NI06|A9NI06_POPAL Type 2 metallothionein (Fragment) OS=Popu... 35 1.8
tr|Q94I87|Q94I87_ATRBE Putative metallothionein-like protein typ... 35 2.4
tr|Q564N1|Q564N1_IPOBA Metallothionein-like type 2 protein OS=Ip... 35 2.4
tr|Q4ZGB3|Q4ZGB3_IPOBA Metallothionein-like type 2 protein OS=Ip... 35 2.4
tr|Q20BM7|Q20BM7_PANGI Metallothionein-like protein OS=Panax gin... 35 2.4
tr|Q1W2K9|Q1W2K9_CAMSI Metallothionein-like protein OS=Camellia ... 35 2.4
tr|B5Y3Z1|B5Y3Z1_PHATR Predicted protein OS=Phaeodactylum tricor... 35 2.4
tr|A8DUB1|A8DUB1_SOLLC Metallothionein-like protein OS=Solanum l... 35 2.4
tr|B5U0R0|B5U0R0_ANABR Metallothionein OS=Anadara broughtonii PE... 35 2.4
tr|Q84SA5|Q84SA5_ASTTR Metallothionein 1 OS=Aster tripolium PE=4... 34 3.1
tr|A9YTZ3|A9YTZ3_SOLTU Metallothionein-like protein OS=Solanum t... 34 3.1

>tr|A8QMV1|A8QMV1_AEQIR Metallothionein OS=Aequipecten irradians
PE=2 SV=1
Length = 145

Score = 43.5 bits (101), Expect = 0.005
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1

Query: 100 FDETALDAPREVTVAGCACRCGSNCQCADPCPCAQTSSGDAC 225
F + P V G AC+CG +C+C+D CPC +G C
Sbjct: 40 FSAKSSTCPDGVCQMGVACKCGGSCKCSDSCPCPNCKAGCKC 81


>tr|Q75NI4|Q75NI4_PHAAU Type 1 metallothionein OS=Phaseolus aureus
GN=MET PE=4 SV=1
Length = 73

Score = 31.6 bits (70), Expect(2) = 0.11
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1

Query: 154 CRCGSNCQCADPCPC 198
C+CGSNC C DPC C
Sbjct: 59 CKCGSNCTC-DPCNC 72



Score = 26.9 bits (58), Expect(2) = 0.11
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1

Query: 145 GCACRCGSNCQC 180
G +C CGSNC C
Sbjct: 7 GSSCNCGSNCSC 18


>tr|Q75NI0|Q75NI0_PHAAN Type 1 metallothionein OS=Phaseolus
angularis GN=MET PE=4 SV=1
Length = 73

Score = 31.6 bits (70), Expect(2) = 0.11
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1

Query: 154 CRCGSNCQCADPCPC 198
C+CGSNC C DPC C
Sbjct: 59 CKCGSNCPC-DPCNC 72



Score = 26.9 bits (58), Expect(2) = 0.11
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1

Query: 145 GCACRCGSNCQC 180
G +C CGSNC C
Sbjct: 7 GSSCNCGSNCSC 18


>tr|B3VKV7|B3VKV7_SOLNI Type 2 metallothionein OS=Solanum nigrum
GN=MT2e PE=4 SV=1
Length = 77

Score = 38.5 bits (88), Expect = 0.17
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1

Query: 124 PREVTVAGCACRCGSNCQCADPCPC 198
P+ T G C+CGSNC+C DPC C
Sbjct: 54 PKNATEGGNGCKCGSNCKC-DPCTC 77


>tr|B3VKV6|B3VKV6_SOLNI Type 2 metallothionein OS=Solanum nigrum
GN=MT2d PE=4 SV=1
Length = 77

Score = 38.1 bits (87), Expect = 0.22
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1

Query: 124 PREVTVAGCACRCGSNCQCADPCPC 198
P+ T G C+CGSNC+C DPC C
Sbjct: 54 PKNATEGGNGCKCGSNCKC-DPCNC 77


>tr|Q6PML5|Q6PML5_POPJC Metallothionein 1b (Putative uncharacterized
protein) OS=Populus jackii GN=MT1b PE=4 SV=1
Length = 73

Score = 32.0 bits (71), Expect(2) = 0.32
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1

Query: 154 CRCGSNCQCADPCPC 198
C+CGSNC C DPC C
Sbjct: 59 CKCGSNCTC-DPCTC 72



Score = 25.0 bits (53), Expect(2) = 0.32
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1

Query: 145 GCACRCGSNCQC 180
G C+CGS+C+C
Sbjct: 7 GSDCKCGSDCKC 18


>tr|B3VKV5|B3VKV5_SOLNI Type 2 metallothionein OS=Solanum nigrum
GN=MT2c PE=4 SV=1
Length = 77

Score = 37.4 bits (85), Expect = 0.37
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1

Query: 124 PREVTVAGCACRCGSNCQCADPCPC 198
P+ T G C+CGSNC C DPC C
Sbjct: 54 PKNATEGGNGCKCGSNCTC-DPCNC 77


>tr|Q6PML6|Q6PML6_POPJC Metallothionein 1a OS=Populus jackii GN=MT1a
PE=4 SV=1
Length = 73

Score = 32.0 bits (71), Expect(2) = 0.42
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1

Query: 154 CRCGSNCQCADPCPC 198
C+CGSNC C DPC C
Sbjct: 59 CKCGSNCTC-DPCSC 72



Score = 24.6 bits (52), Expect(2) = 0.42
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1

Query: 145 GCACRCGSNCQC 180
G C+CGS C+C
Sbjct: 7 GSDCKCGSGCKC 18


>tr|A1Z0P1|A1Z0P1_9ROSI Metallothionein-like protein MT1A OS=Salix
matsudana PE=4 SV=1
Length = 73

Score = 32.0 bits (71), Expect(2) = 0.42
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1

Query: 154 CRCGSNCQCADPCPC 198
C+CGSNC C DPC C
Sbjct: 59 CKCGSNCTC-DPCTC 72



Score = 24.6 bits (52), Expect(2) = 0.42
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1

Query: 145 GCACRCGSNCQC 180
G C+CGS+C+C
Sbjct: 7 GFDCKCGSDCKC 18


>tr|Q9ZSC6|Q9ZSC6_IPOBA Metallothionein-like type 1 protein
OS=Ipomoea batatas GN=mt1k PE=4 SV=1
Length = 66

Score = 35.8 bits (81), Expect = 1.1
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1

Query: 130 EVTVAGCACRCGSNCQCADPCPC 198
+ T G AC+CGSNC C DPC C
Sbjct: 45 KATEGGHACKCGSNCTC-DPCNC 66