BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945469|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_G17, 5'
         (392 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P01864|GCAB_MOUSE Ig gamma-2A chain C region secreted form OS...    30   4.9  
sp|A1L1P9|S47A1_DANRE Multidrug and toxin extrusion protein 1 OS...    29   6.4  
sp|A7GHT6|TGT_CLOBL Queuine tRNA-ribosyltransferase OS=Clostridi...    29   8.4  
sp|A5I6E9|TGT_CLOBH Queuine tRNA-ribosyltransferase OS=Clostridi...    29   8.4  
sp|A7FY17|TGT_CLOB1 Queuine tRNA-ribosyltransferase OS=Clostridi...    29   8.4  

>sp|P01864|GCAB_MOUSE Ig gamma-2A chain C region secreted form
           OS=Mus musculus PE=1 SV=1
          Length = 335

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
 Frame = +2

Query: 146 SNTHVCRSVEGKGFAKTERRLAVLAKVQLN*CP---RAPLCRCLGHLSSRSIFADPDHVR 316
           S T  C         K ++++     +  N CP   R P C     L   S+F  P  ++
Sbjct: 77  SQTITCNVAHPASSTKVDKKIEPRVPITQNPCPPHQRVPPCAAPDLLGGPSVFIFPPKIK 136

Query: 317 SIFVIMLS 340
            + +I LS
Sbjct: 137 DVLMISLS 144


>sp|A1L1P9|S47A1_DANRE Multidrug and toxin extrusion protein 1
           OS=Danio rerio GN=slc47a1 PE=2 SV=1
          Length = 590

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -1

Query: 131 GDTGRHGTTQIYKTTSTQKF-PSCRKSLKN*LP 36
           GDT +     +  T+STQKF   CRK L++ LP
Sbjct: 14  GDTKQEKCDDVLSTSSTQKFCGGCRKKLRSLLP 46


>sp|A7GHT6|TGT_CLOBL Queuine tRNA-ribosyltransferase OS=Clostridium
           botulinum (strain Langeland / NCTC 10281 / Type F)
           GN=tgt PE=3 SV=1
          Length = 376

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -2

Query: 187 KTLALYTPTNMCVGQLAIGEIQVDM-ELHKFIRPHLPRNSPL 65
           KT+A        +G LA+GE   DM  +   + PHLP + P+
Sbjct: 207 KTIAKMDLDGYAIGGLAVGESHEDMYRIIDAVVPHLPEDKPI 248


>sp|A5I6E9|TGT_CLOBH Queuine tRNA-ribosyltransferase OS=Clostridium
           botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type
           A) GN=tgt PE=3 SV=1
          Length = 376

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -2

Query: 187 KTLALYTPTNMCVGQLAIGEIQVDM-ELHKFIRPHLPRNSPL 65
           KT+A        +G LA+GE   DM  +   + PHLP + P+
Sbjct: 207 KTIAKMDLDGYAIGGLAVGESHEDMYRIIDAVVPHLPEDKPI 248


>sp|A7FY17|TGT_CLOB1 Queuine tRNA-ribosyltransferase OS=Clostridium
           botulinum (strain ATCC 19397 / Type A) GN=tgt PE=3 SV=1
          Length = 376

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -2

Query: 187 KTLALYTPTNMCVGQLAIGEIQVDM-ELHKFIRPHLPRNSPL 65
           KT+A        +G LA+GE   DM  +   + PHLP + P+
Sbjct: 207 KTIAKMDLDGYAIGGLAVGESHEDMYRIIDAVVPHLPEDKPI 248

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945469|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_G17, 5'
         (392 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B1X4P7|B1X4P7_PAUCH tRNA nucleotidyltransferase/poly(A) polym...    33   5.4  

>tr|B1X4P7|B1X4P7_PAUCH tRNA nucleotidyltransferase/poly(A)
           polymerase OS=Paulinella chromatophora GN=pcnB PE=4 SV=1
          Length = 410

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
 Frame = +2

Query: 89  WSYKFV*FHVYLY----------LPYSQLSNTHVCRSVEGKGFAKTERRLAVLAKVQLN* 238
           W  +F+ FH +L           +P SQ   +  CR +EG+G+A     L +++ +Q   
Sbjct: 303 WLKEFIEFHQFLIGIRTKNSFSKIPISQWPPSRWCRELEGRGWAPETIVLGLISGIQ--- 359

Query: 239 CPRAPLCR 262
            PR PL R
Sbjct: 360 -PRKPLLR 366