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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945471
Clone id YMU02A01NGRL0009_G19
Library
Length 504
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_G19. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTG
TACCGAGAGCACTTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAAG
CTGCCCATGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCC
AAGGAGTATCCTGAAGCCTTCATCCGCGTGCTGGGCTTTGACGCTAAGAGGCAGGTGCAG
GTCTCCGGCTTCCTTGTCCAGAAGCCCTCTGTCTAACTTTCTTAAAGCAAGCCAATTTAG
TTGGCATGAATGCCTGCTTCCCATTTCCCACTGGCGCCTAACAAGCTTGCTCTTATGAGC
TTTTGTGTCCCAGCCACTTTGCATACATAATGAAACAACTTCCCAGTGGTGGCTTCNNNN
NNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAA
AAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 90
Score (bit) 133.0
E-value 2.0e-31
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945471|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_G19, 5'
         (416 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   133   2e-31
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   131   9e-31
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha...   128   8e-30
sp|O22572|RBS2_FRIAG Ribulose bisphosphate carboxylase small cha...   128   8e-30
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   128   8e-30
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   127   1e-29
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   127   1e-29
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   127   2e-29
sp|O24634|RBS1_FRIAG Ribulose bisphosphate carboxylase small cha...   127   2e-29
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   127   2e-29
sp|P07398|RBS3_WHEAT Ribulose bisphosphate carboxylase small cha...   127   2e-29
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   127   2e-29
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha...   127   2e-29
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha...   127   2e-29
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha...   127   2e-29
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai...   126   3e-29
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   126   3e-29
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   126   3e-29
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   126   3e-29
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   126   3e-29
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   126   3e-29
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   126   4e-29
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   126   4e-29
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   126   4e-29
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   126   4e-29
sp|O22645|RBS5_FRIAG Ribulose bisphosphate carboxylase small cha...   125   5e-29
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   125   5e-29
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   125   7e-29
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   124   1e-28
sp|P27985|RBS2_BRANA Ribulose bisphosphate carboxylase small cha...   124   1e-28

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  133 bits (335), Expect = 2e-31
 Identities = 57/90 (63%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 177
           D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V++E+ EC
Sbjct: 88  DYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGEC 147

Query: 178 AKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 267
            KEYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 148 KKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  131 bits (330), Expect = 9e-31
 Identities = 54/89 (60%), Positives = 68/89 (76%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 180
           D+++R GW PCIEF K+G VYRE+ +  GYYDGRYW MWKLPMFGC D++ VL+E+ EC+
Sbjct: 87  DYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECS 146

Query: 181 KEYPEAFIRVLGFDAKRQVQVSGFLVQKP 267
           K YP+ F R++GFD  RQVQ   FL  KP
Sbjct: 147 KAYPDYFNRIIGFDNTRQVQCISFLTYKP 175


>sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small chain
           3, chloroplastic OS=Fritillaria agrestis GN=RBCS3 PE=2
           SV=1
          Length = 179

 Score =  128 bits (322), Expect = 8e-30
 Identities = 55/89 (61%), Positives = 67/89 (75%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 180
           ++++R GW PC+EF   G V R++    GYYDGRYW MWKLPMFGC DAA V++E AEC 
Sbjct: 90  EYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECK 149

Query: 181 KEYPEAFIRVLGFDAKRQVQVSGFLVQKP 267
           KEYP AFIRV+GFD  RQVQ   F+V+KP
Sbjct: 150 KEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178


>sp|O22572|RBS2_FRIAG Ribulose bisphosphate carboxylase small chain
           2, chloroplastic OS=Fritillaria agrestis GN=RBCS2 PE=2
           SV=1
          Length = 179

 Score =  128 bits (322), Expect = 8e-30
 Identities = 55/89 (61%), Positives = 67/89 (75%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 180
           ++++R GW PC+EF   G V R++    GYYDGRYW MWKLPMFGC DAA V++E AEC 
Sbjct: 90  EYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECK 149

Query: 181 KEYPEAFIRVLGFDAKRQVQVSGFLVQKP 267
           KEYP AFIRV+GFD  RQVQ   F+V+KP
Sbjct: 150 KEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  128 bits (322), Expect = 8e-30
 Identities = 54/90 (60%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 177
           D+++R  W PC+EF+ + G VYREH +  GYYDGRYW MWKLP+FGC D+A VL+E+ EC
Sbjct: 86  DYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEEC 145

Query: 178 AKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 267
            KEYP AFIR++GFD  RQVQ   F+  KP
Sbjct: 146 KKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Hordeum vulgare PE=2 SV=1
          Length = 174

 Score =  127 bits (320), Expect = 1e-29
 Identities = 51/89 (57%), Positives = 65/89 (73%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 180
           D+++R  W PC+EF K+G ++REH    GYYDGRYW MWKLPMFGC DA  VL E+ E  
Sbjct: 77  DYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVK 136

Query: 181 KEYPEAFIRVLGFDAKRQVQVSGFLVQKP 267
           KEYP+A++R++GFD  RQVQ   F+  KP
Sbjct: 137 KEYPDAYVRIIGFDNMRQVQCVSFIAFKP 165


>sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small chain
           PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1
          Length = 175

 Score =  127 bits (320), Expect = 1e-29
 Identities = 52/89 (58%), Positives = 65/89 (73%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 180
           D+++R  W PC+EF K+G V+REH    GYYDGRYW MWKLPMFGC DA  VL E+ E  
Sbjct: 78  DYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVK 137

Query: 181 KEYPEAFIRVLGFDAKRQVQVSGFLVQKP 267
           KEYP+A++RV+GFD  RQVQ   F+  +P
Sbjct: 138 KEYPDAYVRVIGFDNMRQVQCVSFIAFRP 166


>sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small chain
           PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2
          Length = 174

 Score =  127 bits (319), Expect = 2e-29
 Identities = 52/89 (58%), Positives = 65/89 (73%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 180
           D+++R  W PC+EF K+G V+REH    GYYDGRYW MWKLPMFGC DA  VL E+ E  
Sbjct: 77  DYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVK 136

Query: 181 KEYPEAFIRVLGFDAKRQVQVSGFLVQKP 267
           KEYP+A++RV+GFD  RQVQ   F+  +P
Sbjct: 137 KEYPDAYVRVIGFDNLRQVQCVSFIAFRP 165


>sp|O24634|RBS1_FRIAG Ribulose bisphosphate carboxylase small chain
           1/4, chloroplastic OS=Fritillaria agrestis GN=RBCS1 PE=2
           SV=1
          Length = 179

 Score =  127 bits (319), Expect = 2e-29
 Identities = 54/89 (60%), Positives = 67/89 (75%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 180
           ++++R GW PC+EF   G V R++    GYYDGRYW MWKLPMFGC DAA V++E AEC 
Sbjct: 90  EYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECK 149

Query: 181 KEYPEAFIRVLGFDAKRQVQVSGFLVQKP 267
           KEYP AFIRV+GFD  RQVQ   F+V++P
Sbjct: 150 KEYPAAFIRVIGFDNVRQVQCVSFIVERP 178


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  127 bits (318), Expect = 2e-29
 Identities = 53/89 (59%), Positives = 68/89 (76%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 180
           ++++R  W PC+EFD  GS+ R++    GYYDGRYWVMWKLPMFGC +A+ V+ E+ ECA
Sbjct: 82  EYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECA 141

Query: 181 KEYPEAFIRVLGFDAKRQVQVSGFLVQKP 267
           K YP+AFIRV+GFD  RQVQ   F+V KP
Sbjct: 142 KAYPKAFIRVIGFDNVRQVQCISFIVHKP 170
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 90
Score (bit) 179.0
E-value 6.0e-44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945471|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_G19, 5'
         (416 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   179   6e-44
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   135   8e-31
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   132   7e-30
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   132   7e-30
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   132   7e-30
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   130   3e-29
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   130   3e-29
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   130   4e-29
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   130   4e-29
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   130   4e-29
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   129   6e-29
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   129   6e-29
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   129   7e-29
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   129   7e-29
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   129   7e-29
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c...   128   1e-28
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   128   1e-28
tr|Q9ZWG4|Q9ZWG4_AVESA Ribulose bisphosphate carboxylase small c...   128   2e-28
tr|Q9ZSS0|Q9ZSS0_9POAL Ribulose bisphosphate carboxylase small c...   128   2e-28
tr|Q9ZSK0|Q9ZSK0_9POAL Ribulose bisphosphate carboxylase small c...   128   2e-28
tr|Q9ZSJ9|Q9ZSJ9_9POAL Ribulose bisphosphate carboxylase small c...   128   2e-28
tr|Q9SNZ9|Q9SNZ9_9POAL Ribulose bisphosphate carboxylase small c...   128   2e-28
tr|Q9SNZ8|Q9SNZ8_9POAL Ribulose bisphosphate carboxylase small c...   128   2e-28
tr|Q9SNZ7|Q9SNZ7_9POAL Ribulose bisphosphate carboxylase small c...   128   2e-28
tr|Q9SDY9|Q9SDY9_9POAL Ribulose bisphosphate carboxylase small c...   128   2e-28
tr|Q9SDY8|Q9SDY8_9POAL Ribulose bisphosphate carboxylase small c...   128   2e-28

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  179 bits (454), Expect = 6e-44
 Identities = 79/90 (87%), Positives = 86/90 (95%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 180
           ++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAECA
Sbjct: 84  EYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECA 143

Query: 181 KEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 270
           KEYP AFIRVLGFDAKRQVQV+GFLV+KPS
Sbjct: 144 KEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  135 bits (341), Expect = 8e-31
 Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 177
           D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V++E+ EC
Sbjct: 88  DYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGEC 147

Query: 178 AKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 267
            KEYP AFIRV+GFD+ RQVQ   F+V KP
Sbjct: 148 KKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177


>tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small
           chain OS=Oryza sativa subsp. japonica GN=P0463E12.1 PE=3
           SV=1
          Length = 183

 Score =  132 bits (333), Expect = 7e-30
 Identities = 54/89 (60%), Positives = 69/89 (77%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 180
           +F++ KGW PC+EFDK G ++R +    GYYDGRYW +WKLPMFGC DAAAVLRE+ EC 
Sbjct: 81  EFIMSKGWVPCLEFDKEGEIHRSNSRMPGYYDGRYWTLWKLPMFGCSDAAAVLREVEECR 140

Query: 181 KEYPEAFIRVLGFDAKRQVQVSGFLVQKP 267
           +EYP+AFIR++ FD+ RQ Q   F+V KP
Sbjct: 141 REYPDAFIRLIAFDSSRQCQCMSFVVHKP 169


>tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05882 PE=4 SV=1
          Length = 183

 Score =  132 bits (333), Expect = 7e-30
 Identities = 54/89 (60%), Positives = 69/89 (77%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 180
           +F++ KGW PC+EFDK G ++R +    GYYDGRYW +WKLPMFGC DAAAVLRE+ EC 
Sbjct: 81  EFIMSKGWVPCLEFDKEGEIHRSNSRMPGYYDGRYWTLWKLPMFGCSDAAAVLREVEECR 140

Query: 181 KEYPEAFIRVLGFDAKRQVQVSGFLVQKP 267
           +EYP+AFIR++ FD+ RQ Q   F+V KP
Sbjct: 141 REYPDAFIRLIAFDSSRQCQCMSFVVHKP 169


>tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small
           chain OS=Oryza sativa subsp. japonica GN=OsJ_005253 PE=3
           SV=1
          Length = 234

 Score =  132 bits (333), Expect = 7e-30
 Identities = 54/89 (60%), Positives = 69/89 (77%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 180
           +F++ KGW PC+EFDK G ++R +    GYYDGRYW +WKLPMFGC DAAAVLRE+ EC 
Sbjct: 132 EFIMSKGWVPCLEFDKEGEIHRSNSRMPGYYDGRYWTLWKLPMFGCSDAAAVLREVEECR 191

Query: 181 KEYPEAFIRVLGFDAKRQVQVSGFLVQKP 267
           +EYP+AFIR++ FD+ RQ Q   F+V KP
Sbjct: 192 REYPDAFIRLIAFDSSRQCQCMSFVVHKP 220


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  132 bits (331), Expect = 1e-29
 Identities = 55/90 (61%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 177
           D+++R GW PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D++ VL+E+ EC
Sbjct: 89  DYLLRSGWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEEC 148

Query: 178 AKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 267
            KEYP A+IR++GFD  RQVQ   F+  KP
Sbjct: 149 KKEYPNAYIRIIGFDNVRQVQCISFIAFKP 178


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  132 bits (331), Expect = 1e-29
 Identities = 58/93 (62%), Positives = 73/93 (78%), Gaps = 3/93 (3%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 171
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 172 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 270
           EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  132 bits (331), Expect = 1e-29
 Identities = 58/93 (62%), Positives = 73/93 (78%), Gaps = 3/93 (3%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 171
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 172 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 270
           EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  132 bits (331), Expect = 1e-29
 Identities = 55/89 (61%), Positives = 68/89 (76%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 180
           D+M++KGW PC+EFD++GSV REH    GYYDGRYW +WKLPMFGC D++ VL EI EC 
Sbjct: 80  DYMMKKGWIPCLEFDEVGSVRREHSRMPGYYDGRYWTLWKLPMFGCTDSSQVLEEIHECK 139

Query: 181 KEYPEAFIRVLGFDAKRQVQVSGFLVQKP 267
           K YP+A+IR L FD K Q Q   F++QKP
Sbjct: 140 KAYPDAYIRCLAFDNKHQGQCMAFVIQKP 168


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  130 bits (327), Expect = 3e-29
 Identities = 56/93 (60%), Positives = 73/93 (78%), Gaps = 3/93 (3%)
 Frame = +1

Query: 1   DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 171
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 172 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 270
           EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214