DK945477 [AcEST]

DK945477
Clone id	YMU02A01NGRL0009_H01
Library	YMU02
Length	493
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_H01. 5' end sequence.
Accession	DK945477
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	CL1Contig3
Sequence	TATCGTAGCGGGTATAGTTTAGTGGTAAAAGTGTGACTCGTCTCGCAGTGATTTTGATAG TTGAGGGATCGTATCTCGGCTAAATTAACTGAAAGAAAAAACTTTATCTTCGCAGACATA TGTGTTTTCTTATTATTTCTCCAAAATTAGAGGTAGATTAATCAATCTCGTCACTCAGTC ATTTCAAGAACTAGGGAAGATAGTGACGAAGCAGAATTGTTTTGGTACCCCAAGAAATAC TTGGTTTAATTTCTACTTCCTGGGAGATAAATAAAGAAAAAAATCTATGGGTAGACGTCT AAGATAGCTGACTCATCGTCACTAAACCTCAGAGAATAAATCTGGGAAAGAAAGTTGGAA TAAGTAAATCCGGGTTTGTCAAGATTATTGAACATCTATTTGGTTGAACGGGATCCCTCG ATTCAACAACTCGGTGAGATATATTTCCCTAAGGGTTTTTTCCCGAACAAGAAAAAAAAA AAGAAATAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	O43114
Definition	sp\|O43114\|ORC5_SCHPO Origin recognition complex subunit 5 OS=Schizosaccharomyces pombe
Align length	57
Score (bit)	30.8
E-value	3.0
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK945477\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0009_H01, 5' (465 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|O43114\|ORC5_SCHPO Origin recognition complex subunit 5 OS=Sch... 31 3.0 >sp\|O43114\|ORC5_SCHPO Origin recognition complex subunit 5 OS=Schizosaccharomyces pombe GN=orc5 PE=1 SV=2 Length = 455 Score = 30.8 bits (68), Expect = 3.0 Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 8/57 (14%) Frame = +3 Query: 246 LISTSWEINKEKNLWVDVDSLIVTKPQRI--------NLGKKVGISKSGFVKIIE 392 L+ T+++++KE+N+W+++ D + RI ++ K GI+ SGF+ ++E Sbjct: 51 LLRTAFDLSKEENVWINLQDCFTVAHFWYRILIKVGVDKDIALKKGINISGFIYLLE 107
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK945477\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0009_H01, 5' (465 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****