DK945486 |
Clone id |
YMU02A01NGRL0009_H15 |
Library |
YMU02 |
Length |
498 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_H15. 5' end sequence. |
Accession |
DK945486 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL1017Contig1 |
Sequence |
TCCGCATTCCGTTTCCTAAGTTTGCACAGACATACAGCGATGGCCCTCGCCAAGGCCAAA GATCTGGTTGCCAACGATCCCGTCTGTGTGTTTAGCAAGAGCTATTGTCCTTACTGCAAA CAAGTCAAGCAGCTGCTTCAAAGCTTGGGTGTCAAGTTCAAAGCAGTGGAACTCGACCAA GAGTCGGATGGAGGTGAGTTGCAAGCAGCTCTGGCAGAATGGACTGGTCAACGAACAGTC CCGAATGTGTTCATCGGGGGCCAACATATCGGCGGATGCGACAGCACTGTAGCCAAACAT AAGGAAGGACAACTTGTTCCTCTTTTGCAGCAGGCTAAGGCACTTTGATTTGTACTGGCG CTTTAATAATTGCCGTACTTTTGCTATTGGCATACTATGTGAGACAATGTATAAAAACGT ATATATGTTCTGCATTTTCACTTAATACGTAGAGATATTTTGATATCGAAAAAAAAAAAA AAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P55143 |
Definition |
sp|P55143|GLRX_RICCO Glutaredoxin OS=Ricinus communis |
Align length |
102 |
Score (bit) |
155.0 |
E-value |
6.0e-38 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945486|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0009_H15, 5' (468 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P55143|GLRX_RICCO Glutaredoxin OS=Ricinus communis PE=3 SV=1 155 6e-38 sp|Q9ZR41|GLRX_SOLLC Glutaredoxin OS=Solanum lycopersicum PE=3 SV=1 152 9e-37 sp|Q9FNE2|GRXC2_ARATH Glutaredoxin-C2 OS=Arabidopsis thaliana GN... 151 1e-36 sp|P55142|GRXC6_ORYSJ Glutaredoxin-C6 OS=Oryza sativa subsp. jap... 150 3e-36 sp|O81187|GLRX_VERFO Glutaredoxin OS=Vernicia fordii PE=3 SV=1 148 1e-35 sp|Q6K953|GRXC4_ORYSJ Glutaredoxin-C4, chloroplastic OS=Oryza sa... 144 1e-34 sp|Q8L8T2|GRXC1_ARATH Glutaredoxin-C1 OS=Arabidopsis thaliana GN... 134 3e-31 sp|Q99MD6|TRXR3_MOUSE Thioredoxin reductase 3 (Fragment) OS=Mus ... 99 1e-20 sp|Q54GP8|GLRX_DICDI Glutaredoxin OS=Dictyostelium discoideum GN... 99 1e-20 sp|Q8LBS4|GRS12_ARATH Monothiol glutaredoxin-S12, chloroplastic ... 97 5e-20 sp|Q86VQ6|TRXR3_HUMAN Thioredoxin reductase 3 OS=Homo sapiens GN... 94 2e-19 sp|Q0J3L4|GRS10_ORYSJ Monothiol glutaredoxin-S10 OS=Oryza sativa... 94 3e-19 sp|Q0DAE4|GRXC8_ORYSJ Glutaredoxin-C8 OS=Oryza sativa subsp. jap... 92 1e-18 sp|Q8LFQ6|GRXC4_ARATH Glutaredoxin-C4 OS=Arabidopsis thaliana GN... 92 1e-18 sp|Q923X4|GLRX2_MOUSE Glutaredoxin-2, mitochondrial OS=Mus muscu... 91 2e-18 sp|Q6AXW1|GLRX2_RAT Glutaredoxin-2, mitochondrial OS=Rattus norv... 89 1e-17 sp|Q32L67|GLRX2_BOVIN Glutaredoxin-2, mitochondrial OS=Bos tauru... 89 1e-17 sp|Q9NS18|GLRX2_HUMAN Glutaredoxin-2, mitochondrial OS=Homo sapi... 87 5e-17 sp|Q9FVX1|GRXC3_ARATH Glutaredoxin-C3 OS=Arabidopsis thaliana GN... 86 8e-17 sp|P17695|GLRX2_YEAST Glutaredoxin-2, mitochondrial OS=Saccharom... 85 1e-16 sp|Q5RC53|GLRX2_PONAB Glutaredoxin-2, mitochondrial OS=Pongo abe... 85 1e-16 sp|Q8GWS0|GRXC5_ARATH Glutaredoxin-C5, chloroplastic OS=Arabidop... 85 2e-16 sp|Q6H628|GRXS6_ORYSJ Monothiol glutaredoxin-S6 OS=Oryza sativa ... 83 5e-16 sp|Q9UTI2|GLRX2_SCHPO Glutaredoxin-2 OS=Schizosaccharomyces pomb... 80 3e-15 sp|Q19297|YZ73_CAEEL Uncharacterized monothiol glutaredoxin F10D... 79 1e-14 sp|O36032|GLRX1_SCHPO Glutaredoxin-1 OS=Schizosaccharomyces pomb... 78 2e-14 sp|P25373|GLRX1_YEAST Glutaredoxin-1 OS=Saccharomyces cerevisiae... 78 2e-14 sp|P12309|GLRX1_PIG Glutaredoxin-1 OS=Sus scrofa GN=GLRX PE=1 SV=2 76 8e-14 sp|Q7XIZ1|GRXC9_ORYSJ Glutaredoxin-C9 OS=Oryza sativa subsp. jap... 75 2e-13 sp|Q9HU55|GLRX_PSEAE Glutaredoxin OS=Pseudomonas aeruginosa GN=g... 73 7e-13
>sp|P55143|GLRX_RICCO Glutaredoxin OS=Ricinus communis PE=3 SV=1 Length = 102
Score = 155 bits (393), Expect = 6e-38 Identities = 72/102 (70%), Positives = 85/102 (83%) Frame = +1
Query: 40 MALAKAKDLVANDPVCVFSKSYCPYCKQVKQLLQSLGVKFKAVELDQESDGGELQAALAE 219 MA+ K K+LV+++ V VFSK+YCPYC VK+LL LG K+K VELD ESDG E+Q ALAE Sbjct: 1 MAMTKTKELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTESDGSEIQTALAE 60
Query: 220 WTGQRTVPNVFIGGQHIGGCDSTVAKHKEGQLVPLLQQAKAL 345 WTGQRTVPNVFIGG+HIGGCDST AKH +GQLVPLL +A A+ Sbjct: 61 WTGQRTVPNVFIGGKHIGGCDSTTAKHSQGQLVPLLTEAGAV 102
>sp|Q9ZR41|GLRX_SOLLC Glutaredoxin OS=Solanum lycopersicum PE=3 SV=1 Length = 108
Score = 152 bits (383), Expect = 9e-37 Identities = 70/102 (68%), Positives = 85/102 (83%) Frame = +1
Query: 40 MALAKAKDLVANDPVCVFSKSYCPYCKQVKQLLQSLGVKFKAVELDQESDGGELQAALAE 219 M+LAKAK++V+ +PV VFSK+YCP+C VK LL LG FKAVELD E DG E+QAALAE Sbjct: 1 MSLAKAKEIVSGNPVAVFSKTYCPFCVSVKDLLSKLGATFKAVELDSEKDGSEIQAALAE 60
Query: 220 WTGQRTVPNVFIGGQHIGGCDSTVAKHKEGQLVPLLQQAKAL 345 WTGQRTVPNVFIG +HIGGCD+T A H+EG+L+PLL +A A+ Sbjct: 61 WTGQRTVPNVFIGRKHIGGCDATTALHREGKLLPLLTEAGAI 102
>sp|Q9FNE2|GRXC2_ARATH Glutaredoxin-C2 OS=Arabidopsis thaliana GN=GRXC2 PE=2 SV=1 Length = 111
Score = 151 bits (382), Expect = 1e-36 Identities = 70/102 (68%), Positives = 86/102 (84%) Frame = +1
Query: 40 MALAKAKDLVANDPVCVFSKSYCPYCKQVKQLLQSLGVKFKAVELDQESDGGELQAALAE 219 MA+ KAK++V ++ V VFSK+YCPYC +VK+LLQ LG KFKAVELD ESDG ++Q+ LAE Sbjct: 1 MAMQKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAE 60
Query: 220 WTGQRTVPNVFIGGQHIGGCDSTVAKHKEGQLVPLLQQAKAL 345 WTGQRTVPNVFIGG HIGGCD+T HK+G+LVPLL +A A+ Sbjct: 61 WTGQRTVPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEAGAI 102
>sp|P55142|GRXC6_ORYSJ Glutaredoxin-C6 OS=Oryza sativa subsp. japonica GN=GRXC6 PE=1 SV=2 Length = 112
Score = 150 bits (379), Expect = 3e-36 Identities = 71/102 (69%), Positives = 86/102 (84%) Frame = +1
Query: 40 MALAKAKDLVANDPVCVFSKSYCPYCKQVKQLLQSLGVKFKAVELDQESDGGELQAALAE 219 MALAKAK+ VA+ PV V+SKSYCP+C +VK+L + LG FKA+ELD ESDG ELQ+ALAE Sbjct: 1 MALAKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAE 60
Query: 220 WTGQRTVPNVFIGGQHIGGCDSTVAKHKEGQLVPLLQQAKAL 345 WTGQRTVPNVFI G+HIGGCD T+A + EG+LVPLL +A A+ Sbjct: 61 WTGQRTVPNVFINGKHIGGCDDTLALNNEGKLVPLLTEAGAI 102
>sp|O81187|GLRX_VERFO Glutaredoxin OS=Vernicia fordii PE=3 SV=1 Length = 104
Score = 148 bits (373), Expect = 1e-35 Identities = 67/102 (65%), Positives = 84/102 (82%) Frame = +1
Query: 40 MALAKAKDLVANDPVCVFSKSYCPYCKQVKQLLQSLGVKFKAVELDQESDGGELQAALAE 219 MA+ KA++LV+++ V VFSK++CPYC VKQLL LG +FK +ELD ESDG +LQ ALAE Sbjct: 1 MAMIKAQELVSSNSVVVFSKTFCPYCTSVKQLLNQLGAQFKVIELDSESDGSDLQNALAE 60
Query: 220 WTGQRTVPNVFIGGQHIGGCDSTVAKHKEGQLVPLLQQAKAL 345 WTGQRTVPNVFIGG+HIGGCD T H+EG+L+PLL +A A+ Sbjct: 61 WTGQRTVPNVFIGGKHIGGCDKTTGMHQEGKLIPLLTEAGAV 102
>sp|Q6K953|GRXC4_ORYSJ Glutaredoxin-C4, chloroplastic OS=Oryza sativa subsp. japonica GN=GRXC4 PE=3 SV=1 Length = 133
Score = 144 bits (364), Expect = 1e-34 Identities = 69/102 (67%), Positives = 83/102 (81%) Frame = +1
Query: 40 MALAKAKDLVANDPVCVFSKSYCPYCKQVKQLLQSLGVKFKAVELDQESDGGELQAALAE 219 MAL KAK++VA+ PV VFSK+YCP+C +VK+LL L +KAVELD ESDG ELQ+ALA+ Sbjct: 27 MALDKAKEIVASSPVVVFSKTYCPFCARVKRLLAELAASYKAVELDVESDGSELQSALAD 86
Query: 220 WTGQRTVPNVFIGGQHIGGCDSTVAKHKEGQLVPLLQQAKAL 345 WTGQRTVP VFI G+HIGGCD T+A HK G LVPLL +A A+ Sbjct: 87 WTGQRTVPCVFIKGKHIGGCDDTMAMHKGGNLVPLLTEAGAI 128
>sp|Q8L8T2|GRXC1_ARATH Glutaredoxin-C1 OS=Arabidopsis thaliana GN=GRXC1 PE=2 SV=2 Length = 125
Score = 134 bits (336), Expect = 3e-31 Identities = 62/98 (63%), Positives = 79/98 (80%) Frame = +1
Query: 52 KAKDLVANDPVCVFSKSYCPYCKQVKQLLQSLGVKFKAVELDQESDGGELQAALAEWTGQ 231 KAK++V+ PV VFSK+YC YC++VKQLL LG FK +ELD+ SDGGE+Q+AL+EWTGQ Sbjct: 21 KAKEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSEWTGQ 80
Query: 232 RTVPNVFIGGQHIGGCDSTVAKHKEGQLVPLLQQAKAL 345 TVPNVFI G HIGGCD + +K+G+LVPLL +A A+ Sbjct: 81 TTVPNVFIKGNHIGGCDRVMETNKQGKLVPLLTEAGAI 118
>sp|Q99MD6|TRXR3_MOUSE Thioredoxin reductase 3 (Fragment) OS=Mus musculus GN=Txnrd3 PE=1 SV=2 Length = 697
Score = 98.6 bits (244), Expect = 1e-20 Identities = 45/97 (46%), Positives = 62/97 (63%) Frame = +1
Query: 52 KAKDLVANDPVCVFSKSYCPYCKQVKQLLQSLGVKFKAVELDQESDGGELQAALAEWTGQ 231 + +DL+ + V +FSKSYCP+ +VK+L SLGV + +ELDQ DG +Q L E + Q Sbjct: 112 RLRDLIEGNRVMIFSKSYCPHSTRVKELFSSLGVVYNILELDQVDDGASVQEVLTEISNQ 171
Query: 232 RTVPNVFIGGQHIGGCDSTVAKHKEGQLVPLLQQAKA 342 +TVPN+F+ H+GGCD T H+ G L LLQ A Sbjct: 172 KTVPNIFVNKVHVGGCDRTFQAHQNGLLQKLLQDDSA 208
>sp|Q54GP8|GLRX_DICDI Glutaredoxin OS=Dictyostelium discoideum GN=grxA PE=2 SV=1 Length = 100
Score = 98.6 bits (244), Expect = 1e-20 Identities = 49/95 (51%), Positives = 63/95 (66%) Frame = +1
Query: 52 KAKDLVANDPVCVFSKSYCPYCKQVKQLLQSLGVKFKAVELDQESDGGELQAALAEWTGQ 231 K K L+ + +FSK+ CPYC VK L + L V VELD ESDG ELQ+A + +G Sbjct: 3 KVKALIKAHKLIIFSKTTCPYCISVKDLFKKLKVVPFVVELDLESDGSELQSAAGQISGV 62
Query: 232 RTVPNVFIGGQHIGGCDSTVAKHKEGQLVPLLQQA 336 RTVP VFI + IGGCD+T H +G+L+PLLQ+A Sbjct: 63 RTVPQVFINEKFIGGCDATTKLHSQGKLIPLLQEA 97
>sp|Q8LBS4|GRS12_ARATH Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana GN=GRXS12 PE=1 SV=2 Length = 179
Score = 96.7 bits (239), Expect = 5e-20 Identities = 50/94 (53%), Positives = 65/94 (69%), Gaps = 1/94 (1%) Frame = +1
Query: 58 KDLVANDPVCVFSKSYCPYCKQVKQLLQSLGVKFKAVELDQ-ESDGGELQAALAEWTGQR 234 K VA +PV V+SK++C Y QVK L +SL V+ VELDQ S+G +LQ L + TGQ Sbjct: 79 KTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLGSEGSQLQNVLEKITGQY 138
Query: 235 TVPNVFIGGQHIGGCDSTVAKHKEGQLVPLLQQA 336 TVPNVFIGG+HIGGC T+ H +G+L +L +A Sbjct: 139 TVPNVFIGGKHIGGCSDTLQLHNKGELEAILAEA 172
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q945T3 |
Definition |
tr|Q945T3|Q945T3_TILPL Glutaredoxin OS=Tilia platyphyllos |
Align length |
102 |
Score (bit) |
159.0 |
E-value |
5.0e-38 |
Report |
|