DK945496
Clone id YMU02A01NGRL0009_I06
Library
Length 377
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_I06. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GAAAATGAAGAAGGCTTCCTTTTAACAAGCCAAACAATTTAATGGTGCACCCCAAAAGGT
GAAAATCCAATAACCCGAAATACCACTAGCTCAAGCTCCAACCCAAGTAACAAGGGGCAA
GCAAAAACCCCTGGGAATCAACCAAGAACACCTTGGAAAGGTGAATAATCCTGAATGAAC
CAAAACCGAAGCAATACCGTAGAGGAAAAAAAAAAACATGTCGGACCGCCTCGGCCCTGG
AGAAGCTTTCTACACCATTCATTTGTTCCGGAGCCCCCGTTGGTAACTGAACCCGGTCAT
ATCTGTTACCTAGGAAATCCCGGTTACGAAGAAGACCTGGATTCTCACCAATAAAAAAAT
CCCGGCGAAAAAAAAAC
■■Homology search results ■■ -
sp_hit_id Q5ZUJ3
Definition sp|Q5ZUJ3|MUTS_LEGPH DNA mismatch repair protein mutS OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Align length 56
Score (bit) 32.7
E-value 0.57
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945496|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_I06, 5'
(377 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5ZUJ3|MUTS_LEGPH DNA mismatch repair protein mutS OS=Legione... 33 0.57
sp|A5ICW2|MUTS_LEGPC DNA mismatch repair protein mutS OS=Legione... 33 0.57
sp|Q5X4B2|MUTS_LEGPA DNA mismatch repair protein mutS OS=Legione... 33 0.57
sp|Q6IN02|PR15A_RAT Protein phosphatase 1 regulatory subunit 15A... 32 0.97
sp|Q6GPA5|TTYH3_XENLA Protein tweety homolog 3 OS=Xenopus laevis... 29 6.3
sp|P33270|CP6A2_DROME Cytochrome P450 6a2 OS=Drosophila melanoga... 29 6.3
sp|P38174|AMPM2_YEAST Methionine aminopeptidase 2 OS=Saccharomyc... 29 8.3

>sp|Q5ZUJ3|MUTS_LEGPH DNA mismatch repair protein mutS OS=Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1 /
ATCC 33152 / DSM 7513) GN=mutS PE=3 SV=2
Length = 846

Score = 32.7 bits (73), Expect = 0.57
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +1

Query: 175 MNQNRSNTVEEKKKHVGPPRPWRSFLHHSFVPEPPLVTEPGHICYLGNPGYEEDLD 342
+ +N+S + E KK + P + L + + PP++ G + PG++E+LD
Sbjct: 378 LQENKSLLINEIKKEISPLPLLQQLLETAIIDNPPMLIRDGGVI---APGFDEELD 430


>sp|A5ICW2|MUTS_LEGPC DNA mismatch repair protein mutS OS=Legionella
pneumophila (strain Corby) GN=mutS PE=3 SV=2
Length = 846

Score = 32.7 bits (73), Expect = 0.57
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +1

Query: 175 MNQNRSNTVEEKKKHVGPPRPWRSFLHHSFVPEPPLVTEPGHICYLGNPGYEEDLD 342
+ +N+S + E KK + P + L + + PP++ G + PG++E+LD
Sbjct: 378 LQENKSLLINEIKKEISPLPLLQQLLETAIIDNPPMLIRDGGVI---APGFDEELD 430


>sp|Q5X4B2|MUTS_LEGPA DNA mismatch repair protein mutS OS=Legionella
pneumophila (strain Paris) GN=mutS PE=3 SV=1
Length = 846

Score = 32.7 bits (73), Expect = 0.57
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +1

Query: 175 MNQNRSNTVEEKKKHVGPPRPWRSFLHHSFVPEPPLVTEPGHICYLGNPGYEEDLD 342
+ +N+S + E KK + P + L + + PP++ G + PG++E+LD
Sbjct: 378 LQENKSLLINEIKKEISPLPLLQQLLETAIIDNPPMLIRDGGVI---APGFDEELD 430


>sp|Q6IN02|PR15A_RAT Protein phosphatase 1 regulatory subunit 15A
OS=Rattus norvegicus GN=Ppp1r15a PE=2 SV=2
Length = 578

Score = 32.0 bits (71), Expect = 0.97
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3

Query: 114 GASKNPWESTKNTLER*IILNEPKPKQYRRGKKKTCRTASALEKLSTPFICSGA 275
G+ WE +T ER E KP+Q+R G+ C+ A A E +CSG+
Sbjct: 228 GSHSRVWEY--HTRERPKQEGETKPEQHRAGQSHPCQNAEAEEGGPETSVCSGS 279


>sp|Q6GPA5|TTYH3_XENLA Protein tweety homolog 3 OS=Xenopus laevis
GN=ttyh3 PE=2 SV=1
Length = 522

Score = 29.3 bits (64), Expect = 6.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2

Query: 82 YFGLLDFHLLGCTIKLFGLLKGS 14
Y GLL FH+ C + LFGL++ S
Sbjct: 213 YLGLLLFHVFICLLVLFGLIRNS 235


>sp|P33270|CP6A2_DROME Cytochrome P450 6a2 OS=Drosophila
melanogaster GN=Cyp6a2 PE=2 SV=2
Length = 506

Score = 29.3 bits (64), Expect = 6.3
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = -2

Query: 331 LRNRDFLGNRYDRVQLPTGAPEQMNGVESFSRAEAVRHVFFFPL-----RYCFGFGSFRI 167
L +R+F N ++R +P AP + G R V H FF+ + F F F
Sbjct: 18 LYHRNF--NYWNRRGVPHDAPHPLYGNMVGFRKNRVMHDFFYDYYNKYRKSGFPFVGFYF 75

Query: 166 IHLSKVFLVDSQ 131
+H F+VD+Q
Sbjct: 76 LHKPAAFIVDTQ 87


>sp|P38174|AMPM2_YEAST Methionine aminopeptidase 2 OS=Saccharomyces
cerevisiae GN=MAP2 PE=1 SV=3
Length = 421

Score = 28.9 bits (63), Expect = 8.3
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1

Query: 269 GTNEWCRKLLQGRGGPTCFFFSSTVLLRFWFIQDYSPFQGVLG*FPGVF 123
GT +CR+ L R G + F+ L+R +QDY P + G + F
Sbjct: 354 GTLPFCRRYLD-RLGQEKYLFALNNLVRHGLVQDYPPLNDIPGSYTAQF 401


tr_hit_id A3N1I3
Definition tr|A3N1I3|A3N1I3_ACTP2 Glutathione-regulated potassium-efflux system protein OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20)
Align length 66
Score (bit) 32.7
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945496|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_I06, 5'
(377 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A3N1I3|A3N1I3_ACTP2 Glutathione-regulated potassium-efflux sy... 33 9.2

>tr|A3N1I3|A3N1I3_ACTP2 Glutathione-regulated potassium-efflux
system protein OS=Actinobacillus pleuropneumoniae
serotype 5b (strain L20) GN=kefB PE=4 SV=1
Length = 601

Score = 32.7 bits (73), Expect = 9.2
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 10/66 (15%)
Frame = -2

Query: 190 FGFGSFR----IIHLSKV------FLVDSQGFLLAPCYLGWSLS*WYFGLLDFHLLGCTI 41
FGFG F I+H++++ FLV G + P +L W L + FGL F ++G +I
Sbjct: 47 FGFGLFTDSHTILHIAELGVVMFLFLV---GLEMQPAHL-WGLRKYIFGLGSFQVVGASI 102

Query: 40 KLFGLL 23
L GL+
Sbjct: 103 ALTGLV 108