DK945502
Clone id YMU02A01NGRL0009_I14
Library
Length 214
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_I14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GATTGCAAGGGCTTTAAATTCACCATTTCTGAGGTTGTAATTGTCAACTGTTTTTGAGGC
CTGTGTGTAAGGTGTTGCTCTCTCTCTCTTGAGCATGTCTTCTATTGTGTTTTGATTCTT
CCATGCACTGTCATGCGATACTGTATTGTGGCTAAGTGACCGCCTGATGTGGTGGTGGTG
TTATATCAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P13351
Definition sp|P13351|CCNB2_XENLA G2/mitotic-specific cyclin-B2 OS=Xenopus laevis
Align length 31
Score (bit) 30.4
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945502|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_I14, 5'
(187 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P13351|CCNB2_XENLA G2/mitotic-specific cyclin-B2 OS=Xenopus l... 30 2.8
sp|Q8K6F8|RECX_STRP3 Regulatory protein recX OS=Streptococcus py... 30 3.8

>sp|P13351|CCNB2_XENLA G2/mitotic-specific cyclin-B2 OS=Xenopus
laevis GN=ccnb2 PE=1 SV=1
Length = 392

Score = 30.4 bits (67), Expect = 2.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3

Query: 101 KTCSREREQHLTHRPQKQLTITTSEMVNLKP 9
K+CS + EQH + +LT+ EMV++KP
Sbjct: 272 KSCSADAEQHTLAKYLMELTLIDYEMVHIKP 302


>sp|Q8K6F8|RECX_STRP3 Regulatory protein recX OS=Streptococcus
pyogenes serotype M3 GN=recX PE=3 SV=1
Length = 258

Score = 30.0 bits (66), Expect = 3.8
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -2

Query: 147 NTVSHDSAWKNQNTIEDMLKRERATPYTQASKTVDNYNLRNGEFKAL 7
++++H + +N IED+L +E Y + S+ D Y L+ ++AL
Sbjct: 194 HSLNHLNFDQNNQEIEDLLDKELDKQYRKLSRKYDGYTLKQKLYQAL 240


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945502|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_I14, 5'
(187 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******