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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945504
Clone id YMU02A01NGRL0009_I16
Library
Length 755
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_I16. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AGTCATATTAACAGCCAACACAGGAATACAGGCCGCGAGCGCGTACTCACTTTTCCACCC
CCACTCTCTCACCCTCTCTCTCTCTCTCGCGCGCGCGCACACACATACACACGCCGGCAC
TCACGTGCAAGATGAAAAAGCTGTGTAGATGGGTGCATCGCAAGATTTTCTTGTACAATG
TTACATTTGGGCTCTACATGTTGGATTGGTGGGAGCGTCTACTCTTCAATTTGTTGGTTA
TATTACTGATCTGGTTTCTTTGCTATAATGGGTCGCAGTACACAGCAAGCATCTTGAGGG
GGGCAACTTCGGTATTTCATGATTGGCCTACATCATGGCAAAGAATGAAATCGATTAATG
GGGAAGGATGAGAGTTAGTGGCAGAAGTGAAGCTATTTTTTCATTCAAGGAAAAGAAATT
TTCAAGTCTTTCACATGGCCTCATGATTGGCTGTGCTTGTTAAGGAATAGCTCTAGCATT
GTACTTTGAAAGTAGCAATATTTCTTATTTGCTGTGTATAGTTGAAGCGTGTTTCTTTTT
CAGAGTTTGAGAAAAAAAAGCAAGGCAAGGGTTAGCTTGGAATCATGTGTGTGTGAGGTA
ACCAGTGTCCAAAGTGCTGCATAGACCCTGGTGATGACAATAAACTCAAAATCCTTGCGT
AATCAGGGGTATCGGAAATGGCCTTCATTTAAAATTTAAAAAAAGTTGTTGGGGGCCCAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945504|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_I16, 5'
         (718 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id Q3EBR3
Definition tr|Q3EBR3|Q3EBR3_ARATH Uncharacterized protein At2g30942.1 OS=Arabidopsis thaliana
Align length 50
Score (bit) 60.8
E-value 8.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945504|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_I16, 5'
         (718 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q3EBR3|Q3EBR3_ARATH Uncharacterized protein At2g30942.1 OS=Ar...    61   8e-08
tr|A9NZG6|A9NZG6_PICSI Putative uncharacterized protein OS=Picea...    60   1e-07
tr|A8MSB8|A8MSB8_ARATH Uncharacterized protein At1g06515.1 OS=Ar...    60   2e-07
tr|A9PCS1|A9PCS1_POPTR Putative uncharacterized protein OS=Popul...    59   4e-07
tr|A9PCE9|A9PCE9_POPTR Putative uncharacterized protein OS=Popul...    59   4e-07
tr|A9PBI9|A9PBI9_POPTR Putative uncharacterized protein OS=Popul...    59   4e-07
tr|Q7X8E4|Q7X8E4_ORYSJ Putative uncharacterized protein P0030H06...    58   5e-07
tr|B8B5P8|B8B5P8_ORYSI Putative uncharacterized protein OS=Oryza...    58   5e-07
tr|B6SRH5|B6SRH5_MAIZE Putative uncharacterized protein OS=Zea m...    57   2e-06
tr|B6TLV4|B6TLV4_MAIZE Putative uncharacterized protein OS=Zea m...    56   2e-06
tr|B6T100|B6T100_MAIZE Putative uncharacterized protein OS=Zea m...    54   1e-05
tr|A7PUY4|A7PUY4_VITVI Chromosome chr4 scaffold_32, whole genome...    54   1e-05
tr|A9SRV9|A9SRV9_PHYPA Predicted protein OS=Physcomitrella paten...    50   1e-04
tr|Q0D6S2|Q0D6S2_ORYSJ Os07g0446600 protein OS=Oryza sativa subs...    50   2e-04
tr|B6U522|B6U522_MAIZE Putative uncharacterized protein OS=Zea m...    49   3e-04
tr|B6U4I1|B6U4I1_MAIZE Putative uncharacterized protein OS=Zea m...    49   3e-04
tr|B6T1C1|B6T1C1_MAIZE Putative uncharacterized protein OS=Zea m...    49   3e-04
tr|B6UEH5|B6UEH5_MAIZE Putative uncharacterized protein OS=Zea m...    48   6e-04
tr|Q7F927|Q7F927_ORYSJ OSJNBb0061C13.7 protein OS=Oryza sativa s...    48   7e-04
tr|Q01IW5|Q01IW5_ORYSA OSIGBa0102I15.5 protein OS=Oryza sativa G...    48   7e-04
tr|B8AS23|B8AS23_ORYSI Putative uncharacterized protein OS=Oryza...    48   7e-04
tr|A9SZD4|A9SZD4_PHYPA Predicted protein OS=Physcomitrella paten...    47   0.001
tr|Q8LH81|Q8LH81_ORYSJ Putative uncharacterized protein P0030H06...    43   0.023
tr|Q6ZF26|Q6ZF26_ORYSJ Putative uncharacterized protein P0409D09...    42   0.052
tr|A3BJB1|A3BJB1_ORYSJ Putative uncharacterized protein OS=Oryza...    41   0.068
tr|A2YKU4|A2YKU4_ORYSI Putative uncharacterized protein OS=Oryza...    41   0.068
tr|Q0D6S0|Q0D6S0_ORYSJ Os07g0446900 protein OS=Oryza sativa subs...    39   0.34 
tr|Q8LH75|Q8LH75_ORYSJ Putative uncharacterized protein P0030H06...    35   6.4  
tr|A3BJB5|A3BJB5_ORYSJ Putative uncharacterized protein OS=Oryza...    35   6.4  

>tr|Q3EBR3|Q3EBR3_ARATH Uncharacterized protein At2g30942.1
           OS=Arabidopsis thaliana GN=At2g30942 PE=4 SV=1
          Length = 56

 Score = 60.8 bits (146), Expect = 8e-08
 Identities = 26/50 (52%), Positives = 31/50 (62%)
 Frame = +3

Query: 150 WVHRKIFLYNVTFGLYMLDWWERXXXXXXXXXXXXXXCYNGSQYTASILR 299
           WV RKI+LYNVTFGLYMLDWWER               YNGS+Y + + +
Sbjct: 3   WVQRKIYLYNVTFGLYMLDWWERYLFNSLVLILMWFILYNGSRYFSELCK 52


>tr|A9NZG6|A9NZG6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 89

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 25/49 (51%), Positives = 29/49 (59%)
 Frame = +3

Query: 150 WVHRKIFLYNVTFGLYMLDWWERXXXXXXXXXXXXXXCYNGSQYTASIL 296
           W+  KIFLYNVT+GLYMLDWWER              CYNGS++    L
Sbjct: 12  WIRSKIFLYNVTYGLYMLDWWERYLFNTIMILLLCVLCYNGSRFAIESL 60


>tr|A8MSB8|A8MSB8_ARATH Uncharacterized protein At1g06515.1
           OS=Arabidopsis thaliana GN=At1g06515 PE=4 SV=1
          Length = 56

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/50 (50%), Positives = 31/50 (62%)
 Frame = +3

Query: 150 WVHRKIFLYNVTFGLYMLDWWERXXXXXXXXXXXXXXCYNGSQYTASILR 299
           WV RKI+LYNVTFGLYMLDWWER               YNG++Y + + +
Sbjct: 3   WVQRKIYLYNVTFGLYMLDWWERYLFNSLVVVLMWFVLYNGTRYFSELFQ 52


>tr|A9PCS1|A9PCS1_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=4 SV=1
          Length = 56

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 25/50 (50%), Positives = 29/50 (58%)
 Frame = +3

Query: 150 WVHRKIFLYNVTFGLYMLDWWERXXXXXXXXXXXXXXCYNGSQYTASILR 299
           WV RKI+LYNVTFGL+MLDWWER               YNGS+Y     +
Sbjct: 3   WVQRKIYLYNVTFGLFMLDWWERCLFNILVIVLMWFIFYNGSRYVTDFCK 52


>tr|A9PCE9|A9PCE9_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=4 SV=1
          Length = 56

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 25/50 (50%), Positives = 29/50 (58%)
 Frame = +3

Query: 150 WVHRKIFLYNVTFGLYMLDWWERXXXXXXXXXXXXXXCYNGSQYTASILR 299
           WV RKI+LYNVTFGL+MLDWWER               YNGS+Y     +
Sbjct: 3   WVQRKIYLYNVTFGLFMLDWWERCLFNILVIVLMWFIFYNGSRYVTDFCK 52


>tr|A9PBI9|A9PBI9_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=4 SV=1
          Length = 64

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 25/50 (50%), Positives = 29/50 (58%)
 Frame = +3

Query: 150 WVHRKIFLYNVTFGLYMLDWWERXXXXXXXXXXXXXXCYNGSQYTASILR 299
           WV RKI+LYNVTFGL+MLDWWER               YNGS+Y     +
Sbjct: 3   WVQRKIYLYNVTFGLFMLDWWERCLFNILVIVLMWFIFYNGSRYVTDFCK 52


>tr|Q7X8E4|Q7X8E4_ORYSJ Putative uncharacterized protein
           P0030H06.126 (Putative uncharacterized protein
           P0475E07.106) OS=Oryza sativa subsp. japonica
           GN=P0030H06.126 PE=4 SV=1
          Length = 77

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 24/48 (50%), Positives = 29/48 (60%)
 Frame = +3

Query: 150 WVHRKIFLYNVTFGLYMLDWWERXXXXXXXXXXXXXXCYNGSQYTASI 293
           WV RKI LYNVT GLYMLDWWER              C+NGS++ + +
Sbjct: 6   WVSRKIHLYNVTMGLYMLDWWERCLFNIMVLILLWFICFNGSRFASDV 53


>tr|B8B5P8|B8B5P8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_25839 PE=4 SV=1
          Length = 74

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 24/48 (50%), Positives = 29/48 (60%)
 Frame = +3

Query: 150 WVHRKIFLYNVTFGLYMLDWWERXXXXXXXXXXXXXXCYNGSQYTASI 293
           WV RKI LYNVT GLYMLDWWER              C+NGS++ + +
Sbjct: 6   WVSRKIHLYNVTMGLYMLDWWERCLFNMMVLILLWFVCFNGSRFASDV 53


>tr|B6SRH5|B6SRH5_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 78

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/48 (47%), Positives = 29/48 (60%)
 Frame = +3

Query: 150 WVHRKIFLYNVTFGLYMLDWWERXXXXXXXXXXXXXXCYNGSQYTASI 293
           WV +KI LYNVT GLYMLDWWER              C+NGS++ + +
Sbjct: 7   WVGKKIHLYNVTMGLYMLDWWERCLFNILVLILLWFVCFNGSRFASDV 54


>tr|B6TLV4|B6TLV4_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 78

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)
 Frame = +3

Query: 150 WVHRKIFLYNVTFGLYMLDWWERXXXXXXXXXXXXXXCYNGSQYTASI 293
           WV +KI LYNVT GLYMLDWWER              C+NGS++   +
Sbjct: 7   WVGKKIHLYNVTMGLYMLDWWERCLFNILVLILLWFICFNGSRFATDV 54