DK945522
Clone id YMU02A01NGRL0009_J12
Library
Length 166
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_J12. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GCCCGGATTTACCAACAGCCAATTATTGTGTACATTCCTGAACATGAGGTATCATTTACT
TTAGTCTTGAGAAGCCAGAAAAATTGTAGGTTTTTACACTGTGTTATTTCTACGCAGACA
AAAGGGTTTAGCGGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q837U7
Definition sp|Q837U7|OTC_ENTFA Ornithine carbamoyltransferase OS=Enterococcus faecalis
Align length 30
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945522|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_J12, 5'
(137 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q837U7|OTC_ENTFA Ornithine carbamoyltransferase OS=Enterococc... 31 2.2
sp|Q8DW19|OTCC_STRMU Ornithine carbamoyltransferase, catabolic O... 29 8.3

>sp|Q837U7|OTC_ENTFA Ornithine carbamoyltransferase OS=Enterococcus
faecalis GN=argF PE=3 SV=1
Length = 339

Score = 30.8 bits (68), Expect = 2.2
Identities = 10/30 (33%), Positives = 23/30 (76%)
Frame = +1

Query: 28 VYIPEHEVSFTLVLRSQKNCRFLHCVISTQ 117
V+ P+++V+ ++ R+ NC+F+HC+ +T+
Sbjct: 245 VFYPKYQVNQEMMDRAGANCKFMHCLPATR 274


>sp|Q8DW19|OTCC_STRMU Ornithine carbamoyltransferase, catabolic
OS=Streptococcus mutans GN=arcB PE=3 SV=1
Length = 339

Score = 28.9 bits (63), Expect = 8.3
Identities = 7/30 (23%), Positives = 22/30 (73%)
Frame = +1

Query: 28 VYIPEHEVSFTLVLRSQKNCRFLHCVISTQ 117
++ P+++V ++ ++ +C+F+HC+ +T+
Sbjct: 247 IFFPKYQVDSQMMAKAGADCKFMHCLPATR 276


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945522|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_J12, 5'
(137 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******