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DK945553
Clone id YMU02A01NGRL0009_L02
Library
Length 164
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_L02. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GACCAGTGGAAAATCCGCGGGTCTTTGCCGATACACTACACGTAAAAATCGTCGTAACAC
ACCCGCTCGGCTGGAGTTAGAGAAGTATTGCTTCCATTGTCACAAGCATACCTTGCACAA
AGAGTCAAAGAAGCATAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q85FK1
Definition sp|Q85FK1|RK33_ADICA 50S ribosomal protein L33, chloroplastic OS=Adiantum capillus-veneris
Align length 44
Score (bit) 99.4
E-value 5.0e-21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945553|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_L02, 5'
         (136 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q85FK1|RK33_ADICA 50S ribosomal protein L33, chloroplastic OS...    99   5e-21
sp|Q6YXM3|RK33_PHYPA 50S ribosomal protein L33, chloroplastic OS...    68   2e-11
sp|B1VKE2|RK33_CRYJA 50S ribosomal protein L33, chloroplastic OS...    68   2e-11
sp|P06392|RK33_MARPO 50S ribosomal protein L33, chloroplastic OS...    67   4e-11
sp|P48958|RL33_SYNY3 50S ribosomal protein L33 OS=Synechocystis ...    66   5e-11
sp|Q32RT8|RK33_STAPU 50S ribosomal protein L33, chloroplastic OS...    65   1e-10
sp|Q5N502|RL33_SYNP6 50S ribosomal protein L33 OS=Synechococcus ...    64   2e-10
sp|Q31P67|RL33_SYNE7 50S ribosomal protein L33 OS=Synechococcus ...    64   2e-10
sp|P49565|RK33_ODOSI 50S ribosomal protein L33, chloroplastic OS...    64   2e-10
sp|Q19V74|RK33_CHLAT 50S ribosomal protein L33, chloroplastic OS...    64   2e-10
sp|A4QLC7|RK33_LEPVR 50S ribosomal protein L33, chloroplastic OS...    64   3e-10
sp|Q2JL27|RL33_SYNJB 50S ribosomal protein L33 OS=Synechococcus ...    63   4e-10
sp|B0JVN3|RL33_MICAN 50S ribosomal protein L33 OS=Microcystis ae...    63   4e-10
sp|B0C2J4|RL33_ACAM1 50S ribosomal protein L33 OS=Acaryochloris ...    63   4e-10
sp|A0T0D5|RK33_PHATR 50S ribosomal protein L33, chloroplastic OS...    63   4e-10
sp|B1NWH1|RK33_MANES 50S ribosomal protein L33, chloroplastic OS...    63   4e-10
sp|B0YPP9|RK33_ANEMR 50S ribosomal protein L33, plastid OS=Aneur...    63   4e-10
sp|B2XWM6|RK33_FAGEA 50S ribosomal protein L33, chloroplastic OS...    63   5e-10
sp|A4QL40|RK33_DRANE 50S ribosomal protein L33, chloroplastic OS...    63   5e-10
sp|A4QKV2|RK33_CRUWA 50S ribosomal protein L33, chloroplastic OS...    63   5e-10
sp|A4QKL3|RK33_CAPBU 50S ribosomal protein L33, chloroplastic OS...    63   5e-10
sp|Q7YJV5|RK33_CALFG 50S ribosomal protein L33, chloroplastic OS...    62   7e-10
sp|Q10Y90|RL33_TRIEI 50S ribosomal protein L33 OS=Trichodesmium ...    62   9e-10
sp|Q3MDJ2|RL33_ANAVT 50S ribosomal protein L33 OS=Anabaena varia...    62   9e-10
sp|Q8YNV9|RL33_ANASP 50S ribosomal protein L33 OS=Anabaena sp. (...    62   9e-10
sp|A0T0R3|RK33_THAPS 50S ribosomal protein L33, chloroplastic OS...    62   9e-10
sp|P41612|RK33_PINTH 50S ribosomal protein L33, chloroplastic OS...    62   9e-10
sp|Q7GUD1|RK33_PINKO 50S ribosomal protein L33, chloroplastic OS...    62   9e-10
sp|A2T354|RK33_ANGEV 50S ribosomal protein L33, chloroplastic OS...    62   9e-10
sp|Q06GN9|RK33_PIPCE 50S ribosomal protein L33, chloroplastic OS...    62   1e-09

>sp|Q85FK1|RK33_ADICA 50S ribosomal protein L33, chloroplastic
           OS=Adiantum capillus-veneris GN=rpl33 PE=2 SV=2
          Length = 66

 Score = 99.4 bits (246), Expect = 5e-21
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +2

Query: 2   TSGKSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESKK 133
           TSGKSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESKK
Sbjct: 23  TSGKSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESKK 66


>sp|Q6YXM3|RK33_PHYPA 50S ribosomal protein L33, chloroplastic
           OS=Physcomitrella patens GN=rpl33 PE=3 SV=1
          Length = 66

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = +2

Query: 11  KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESKK 133
           K  G+ RYTT+KNRRNTP RLEL+K+C +C+KHT+HKE KK
Sbjct: 26  KKLGVSRYTTQKNRRNTPTRLELKKFCSYCNKHTIHKEIKK 66


>sp|B1VKE2|RK33_CRYJA 50S ribosomal protein L33, chloroplastic
           OS=Cryptomeria japonica GN=rpl33 PE=3 SV=1
          Length = 66

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = +2

Query: 11  KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESKK 133
           KS G+ RYTTRKNRRNTP RLEL+K+C +C+KHT+H E KK
Sbjct: 26  KSPGISRYTTRKNRRNTPLRLELKKFCPYCYKHTIHGEIKK 66


>sp|P06392|RK33_MARPO 50S ribosomal protein L33, chloroplastic
           OS=Marchantia polymorpha GN=rpl33 PE=3 SV=3
          Length = 65

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 27/41 (65%), Positives = 35/41 (85%)
 Frame = +2

Query: 11  KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESKK 133
           +  G+ RYTT+KNRRNTP RLEL+K+C +C+KHT+HKE KK
Sbjct: 25  RKKGISRYTTQKNRRNTPIRLELKKFCCYCNKHTIHKEIKK 65


>sp|P48958|RL33_SYNY3 50S ribosomal protein L33 OS=Synechocystis sp.
           (strain PCC 6803) GN=rpmG PE=3 SV=1
          Length = 65

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = +2

Query: 11  KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESK 130
           +S G+ RYTT KNRRNT ARLEL+K+C HC+KHT+HKE+K
Sbjct: 26  RSNGVNRYTTMKNRRNTTARLELKKFCTHCNKHTIHKETK 65


>sp|Q32RT8|RK33_STAPU 50S ribosomal protein L33, chloroplastic
           OS=Staurastrum punctulatum GN=rpl33 PE=3 SV=1
          Length = 65

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = +2

Query: 20  GLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESKK 133
           G+ RYTT+KNRRNTP RLEL+K+C HC  HTLHKE KK
Sbjct: 28  GISRYTTQKNRRNTPNRLELKKFCPHCSLHTLHKEIKK 65


>sp|Q5N502|RL33_SYNP6 50S ribosomal protein L33 OS=Synechococcus sp.
           (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpmG
           PE=3 SV=1
          Length = 64

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 27/43 (62%), Positives = 35/43 (81%)
 Frame = +2

Query: 2   TSGKSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESK 130
           T+ +S G+ RYTT+KNRRNT  RLE++K+C HC+KHT HKE K
Sbjct: 22  TAKRSPGVSRYTTQKNRRNTTERLEIKKFCPHCNKHTAHKEIK 64


>sp|Q31P67|RL33_SYNE7 50S ribosomal protein L33 OS=Synechococcus
           elongatus (strain PCC 7942) GN=rpmG PE=3 SV=1
          Length = 64

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 27/43 (62%), Positives = 35/43 (81%)
 Frame = +2

Query: 2   TSGKSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESK 130
           T+ +S G+ RYTT+KNRRNT  RLE++K+C HC+KHT HKE K
Sbjct: 22  TAKRSPGVSRYTTQKNRRNTTERLEIKKFCPHCNKHTAHKEIK 64


>sp|P49565|RK33_ODOSI 50S ribosomal protein L33, chloroplastic
           OS=Odontella sinensis GN=rpl33 PE=3 SV=1
          Length = 64

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 27/43 (62%), Positives = 35/43 (81%)
 Frame = +2

Query: 2   TSGKSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESK 130
           T+ +S G+ RYTT+KNRRN P R+EL+KYC HC+K T+HKE K
Sbjct: 22  TNKRSNGVSRYTTQKNRRNNPERIELKKYCPHCNKSTIHKEIK 64


>sp|Q19V74|RK33_CHLAT 50S ribosomal protein L33, chloroplastic
           OS=Chlorokybus atmophyticus GN=rpl33 PE=3 SV=1
          Length = 64

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 27/40 (67%), Positives = 34/40 (85%)
 Frame = +2

Query: 11  KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESK 130
           +S G+ RYTT+KNRRNTP RLEL+K+C  C++HTLHKE K
Sbjct: 25  RSPGVSRYTTQKNRRNTPNRLELKKFCSRCNQHTLHKEIK 64
tr_hit_id B8HWY6
Definition tr|B8HWY6|B8HWY6_9CHRO Ribosomal protein L33 OS=Cyanothece sp. PCC 7425
Align length 40
Score (bit) 66.6
E-value 6.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945553|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_L02, 5'
         (136 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8HWY6|B8HWY6_9CHRO Ribosomal protein L33 OS=Cyanothece sp. P...    67   6e-10
tr|B7KBE3|B7KBE3_9CHRO Ribosomal protein L33 OS=Cyanothece sp. P...    66   7e-10
tr|B3IWG9|B3IWG9_TAKLE Ribosomal protein L33 OS=Takakia lepidozi...    66   1e-09
tr|B7ZIQ6|B7ZIQ6_KETDA Ribosomal protein L33 OS=Keteleeria david...    65   1e-09
tr|A0YR61|A0YR61_9CYAN 50S ribosomal protein L33 OS=Lyngbya sp. ...    64   3e-09
tr|B2J0D4|B2J0D4_NOSP7 Ribosomal protein L33 OS=Nostoc punctifor...    64   4e-09
tr|Q4FG88|Q4FG88_TYPLA 50S ribosomal protein L33 (Fragment) OS=T...    64   5e-09
tr|B7UCF6|B7UCF6_9POAL Rpl33 OS=Typha domingensis PE=4 SV=1            64   5e-09
tr|A8YF81|A8YF81_MICAE 50S ribosomal protein L33 OS=Microcystis ...    63   6e-09
tr|Q4FG91|Q4FG91_GINBI 50S ribosomal protein L33 (Fragment) OS=G...    63   8e-09
tr|Q4FG89|Q4FG89_RANMC 50S ribosomal protein L33 (Fragment) OS=R...    62   1e-08
tr|A0ZC91|A0ZC91_NODSP 50S ribosomal protein L33 OS=Nodularia sp...    62   1e-08
tr|B8LEU0|B8LEU0_THAPS Predicted protein OS=Thalassiosira pseudo...    62   1e-08
tr|B1XPV1|B1XPV1_SYNP2 Ribosomal protein L33 OS=Synechococcus sp...    62   2e-08
tr|A3IXH6|A3IXH6_9CHRO 50S ribosomal protein L33 OS=Cyanothece s...    62   2e-08
tr|B1WYB2|B1WYB2_CYAA5 50S ribosomal protein L33 OS=Cyanothece (...    61   2e-08
tr|Q4BZP3|Q4BZP3_CROWT 50S ribosomal protein L33 OS=Crocosphaera...    61   2e-08
tr|B7JW32|B7JW32_SYNP8 Ribosomal protein L33 OS=Synechococcus sp...    61   2e-08
tr|B7T1Q7|B7T1Q7_VAULI Ribosomal protein L33 OS=Vaucheria litore...    61   2e-08
tr|B5AH23|B5AH23_9ROSI Ribosomal protein L33 OS=Gonystylus banca...    61   2e-08
tr|A7QCX0|A7QCX0_VITVI 50S ribosomal protein L33 OS=Vitis vinife...    61   2e-08
tr|Q4FG90|Q4FG90_NUPAD 50S ribosomal protein L33 (Fragment) OS=N...    61   3e-08
tr|Q05SV2|Q05SV2_9SYNE 50S ribosomal protein L33 OS=Synechococcu...    60   4e-08
tr|A9QBK7|A9QBK7_MUSAC 50S ribosomal protein L33 (Fragment) OS=M...    60   4e-08
tr|B5IJW8|B5IJW8_9CHRO Ribosomal protein L33 OS=Cyanobium sp. PC...    60   5e-08
tr|Q4FG87|Q4FG87_9ASPA 50S ribosomal protein L33 (Fragment) OS=Y...    60   5e-08
tr|A9QBB4|A9QBB4_ELAOL 50S ribosomal protein L33 (Fragment) OS=E...    60   5e-08
tr|Q4FG92|Q4FG92_ACOAM 50S ribosomal protein L33 (Fragment) OS=A...    60   7e-08
tr|A3Z2C1|A3Z2C1_9SYNE 50S ribosomal protein L33 OS=Synechococcu...    59   1e-07
tr|B8R469|B8R469_TRISU Ribosomal protein L33 OS=Trifolium subter...    59   1e-07

>tr|B8HWY6|B8HWY6_9CHRO Ribosomal protein L33 OS=Cyanothece sp. PCC
           7425 GN=Cyan7425_0903 PE=4 SV=1
          Length = 62

 Score = 66.6 bits (161), Expect = 6e-10
 Identities = 29/40 (72%), Positives = 34/40 (85%)
 Frame = +2

Query: 11  KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESK 130
           +SAG+ RYTT KNRRNT ARLEL K+C HC+KHT+HKE K
Sbjct: 23  RSAGVSRYTTTKNRRNTTARLELNKFCPHCNKHTVHKEIK 62


>tr|B7KBE3|B7KBE3_9CHRO Ribosomal protein L33 OS=Cyanothece sp. PCC
           7424 GN=PCC7424_3097 PE=4 SV=1
          Length = 64

 Score = 66.2 bits (160), Expect = 7e-10
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = +2

Query: 11  KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESK 130
           +SAG+ RYTT KNRRNT  RLEL+K+C HC+KHT+HKE K
Sbjct: 25  RSAGVSRYTTSKNRRNTTGRLELKKFCTHCNKHTVHKEIK 64


>tr|B3IWG9|B3IWG9_TAKLE Ribosomal protein L33 OS=Takakia
           lepidozioides GN=rpl33 PE=4 SV=1
          Length = 65

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = +2

Query: 20  GLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESKK 133
           G+ RYTT+KNRRNTP RLEL+K+C +C+KHT+HKE KK
Sbjct: 28  GVSRYTTKKNRRNTPTRLELKKFCPYCNKHTIHKEIKK 65


>tr|B7ZIQ6|B7ZIQ6_KETDA Ribosomal protein L33 OS=Keteleeria
           davidiana GN=rpl33 PE=4 SV=1
          Length = 68

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = +2

Query: 11  KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESKK 133
           K  G+ RYTTRKNRRNTP RLEL+K+C +C+KHT+H E KK
Sbjct: 26  KFPGISRYTTRKNRRNTPIRLELKKFCPYCYKHTIHGEIKK 66


>tr|A0YR61|A0YR61_9CYAN 50S ribosomal protein L33 OS=Lyngbya sp. PCC
           8106 GN=L8106_11842 PE=3 SV=1
          Length = 62

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 27/40 (67%), Positives = 34/40 (85%)
 Frame = +2

Query: 11  KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESK 130
           +S G+ RYTT KNRRNT +RLEL+K+C HC+KHT+HKE K
Sbjct: 23  RSKGVSRYTTEKNRRNTSSRLELKKFCPHCNKHTVHKEIK 62


>tr|B2J0D4|B2J0D4_NOSP7 Ribosomal protein L33 OS=Nostoc punctiforme
           (strain ATCC 29133 / PCC 73102) GN=Npun_R4941 PE=4 SV=1
          Length = 64

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 27/40 (67%), Positives = 34/40 (85%)
 Frame = +2

Query: 11  KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESK 130
           +SAG+ RYT+ KNRRNT  RLEL+K+C HC+KHT+HKE K
Sbjct: 25  RSAGVSRYTSTKNRRNTTNRLELKKFCTHCNKHTVHKEIK 64


>tr|Q4FG88|Q4FG88_TYPLA 50S ribosomal protein L33 (Fragment)
           OS=Typha latifolia GN=rpl33 PE=3 SV=1
          Length = 66

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 26/41 (63%), Positives = 33/41 (80%)
 Frame = +2

Query: 11  KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESKK 133
           +S G+ RY T+KNR NTP+RLEL K+C +CHKHT+H E KK
Sbjct: 26  ESPGISRYITQKNRHNTPSRLELRKFCRYCHKHTIHGEIKK 66


>tr|B7UCF6|B7UCF6_9POAL Rpl33 OS=Typha domingensis PE=4 SV=1
          Length = 66

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 26/41 (63%), Positives = 33/41 (80%)
 Frame = +2

Query: 11  KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESKK 133
           +S G+ RY T+KNR NTP+RLEL K+C +CHKHT+H E KK
Sbjct: 26  ESPGISRYITQKNRHNTPSRLELRKFCRYCHKHTIHGEIKK 66


>tr|A8YF81|A8YF81_MICAE 50S ribosomal protein L33 OS=Microcystis
           aeruginosa PCC 7806 GN=IPF_5488 PE=3 SV=1
          Length = 64

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = +2

Query: 11  KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESK 130
           ++ G+ RYTT KNRRNT  RLE++KYC HC+KHT+HKE K
Sbjct: 25  RTPGVSRYTTSKNRRNTTGRLEIKKYCPHCNKHTVHKEIK 64


>tr|Q4FG91|Q4FG91_GINBI 50S ribosomal protein L33 (Fragment)
           OS=Ginkgo biloba GN=rpl33 PE=3 SV=1
          Length = 66

 Score = 62.8 bits (151), Expect = 8e-09
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = +2

Query: 11  KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKESKK 133
           K  G+ RYTTRKNRRNTP R EL+K+C +C+KHT+H E KK
Sbjct: 26  KFPGVSRYTTRKNRRNTPIRSELKKFCPYCYKHTIHGEIKK 66