BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945560|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_L11, 5'
         (224 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q10276|KICH_SCHPO Putative choline kinase OS=Schizosaccharomy...    31   2.2  
sp|Q8CD26|S35E1_MOUSE Solute carrier family 35 member E1 OS=Mus ...    29   6.3  
sp|P0C6B1|S35E1_RAT Solute carrier family 35 member E1 OS=Rattus...    29   8.2  
sp|Q64X36|CRCB_BACFR Protein crcB homolog OS=Bacteroides fragili...    29   8.2  
sp|Q5LG62|CRCB_BACFN Protein crcB homolog OS=Bacteroides fragili...    29   8.2  

>sp|Q10276|KICH_SCHPO Putative choline kinase OS=Schizosaccharomyces
           pombe GN=SPAC13G7.12c PE=2 SV=1
          Length = 456

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
 Frame = -3

Query: 174 PLSEKNF------LDFSGHNQCNYHLLSYISHWCGSIFMLKCNYLMEASAFDILRSLMQL 13
           PLS+K+        +++G N C + L +Y + W         NYLM+ S +    +  +L
Sbjct: 261 PLSQKHRTLVPVDFEYAGPNLCAFDLANYFAEWMADYHHPTHNYLMDRSRYPDFNA-RKL 319

Query: 12  SYH 4
            YH
Sbjct: 320 VYH 322


>sp|Q8CD26|S35E1_MOUSE Solute carrier family 35 member E1 OS=Mus
           musculus GN=Slc35e1 PE=1 SV=2
          Length = 409

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
 Frame = -3

Query: 114 LSYISHWCGSIFMLK----CNYLMEASAFDILRSLMQLSY 7
           L+Y+S W  ++ +L     CN+     AF IL  +  LSY
Sbjct: 252 LAYVSQWPWTLLLLAVSGFCNFAQNVIAFSILNLISPLSY 291


>sp|P0C6B1|S35E1_RAT Solute carrier family 35 member E1 OS=Rattus
           norvegicus GN=Slc35e1 PE=3 SV=1
          Length = 409

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
 Frame = -3

Query: 114 LSYISHWCGSIFMLK----CNYLMEASAFDILRSLMQLSY 7
           L+Y+S W  ++ +L     CN+     AF IL  +  LSY
Sbjct: 252 LAYVSQWPWTLLLLVVSGFCNFAQNVIAFSILNLISPLSY 291


>sp|Q64X36|CRCB_BACFR Protein crcB homolog OS=Bacteroides fragilis
           GN=crcB PE=3 SV=1
          Length = 127

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -2

Query: 214 PATSPLPFLYFKVSFIGEKLFGFFRS*SVQLSPTF 110
           PA  P P+  F V+ IG  L GFF S S + + +F
Sbjct: 31  PALFPFPWGTFAVNIIGSLLIGFFYSFSERFNLSF 65


>sp|Q5LG62|CRCB_BACFN Protein crcB homolog OS=Bacteroides fragilis
           (strain ATCC 25285 / NCTC 9343) GN=crcB PE=3 SV=1
          Length = 127

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -2

Query: 214 PATSPLPFLYFKVSFIGEKLFGFFRS*SVQLSPTF 110
           PA  P P+  F V+ IG  L GFF S S + + +F
Sbjct: 31  PALFPFPWGTFAVNIIGSLLIGFFYSFSERFNLSF 65

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945560|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_L11, 5'
         (224 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8CPG2|B8CPG2_9GAMM Exporter of the RND superfamily OS=Shewan...    34   4.2  
tr|A2EJY3|A2EJY3_TRIVA Putative uncharacterized protein OS=Trich...    34   4.2  

>tr|B8CPG2|B8CPG2_9GAMM Exporter of the RND superfamily
           OS=Shewanella piezotolerans WP3 GN=swp_2812 PE=4 SV=1
          Length = 767

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -1

Query: 155 FWIFQVIISAIITYF--PISVIGVVAFLCSSATI*WRLALLTYLG 27
           F++  ++++A++ YF     V+ ++  LCS   + W+L LLT +G
Sbjct: 231 FFLIAILVTAVMVYFFSKSIVLTILPLLCSLTAVIWQLGLLTVVG 275


>tr|A2EJY3|A2EJY3_TRIVA Putative uncharacterized protein
           OS=Trichomonas vaginalis G3 GN=TVAG_311760 PE=4 SV=1
          Length = 737

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -3

Query: 180 KFPLSEKNFLDFSGHNQCNYHLLSYISHWCGSI 82
           +FP S K  +DF    +C +H+L+Y+ + CG +
Sbjct: 181 RFPTS-KEIIDFPPFQECKFHVLNYLHYMCGKV 212