BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945561|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_L12, 5'
         (302 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LMS3|LAC1_ARATH Laccase-1 OS=Arabidopsis thaliana GN=LAC1 P...    33   0.58 
sp|Q14112|NID2_HUMAN Nidogen-2 OS=Homo sapiens GN=NID2 PE=1 SV=2       31   1.7  
sp|Q17BA4|MED15_AEDAE Mediator of RNA polymerase II transcriptio...    31   2.2  
sp|Q5RAJ7|NEIL2_PONAB Endonuclease VIII-like 2 OS=Pongo abelii G...    29   8.4  

>sp|Q9LMS3|LAC1_ARATH Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2
           SV=1
          Length = 581

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = -3

Query: 249 LHSEAIRLGPAYLASLRIREDKING-HYLELSFKHKNRQKPLGGSITLDPPNTQGKTKPK 73
           +H++AI + P    +L +R D+++G  +L  +  +     P   S T+      GKTKP+
Sbjct: 257 VHTKAIMIAPGQTTTLLLRADQLSGGEFLIAATPYVTSVFPFNNSTTVGFIRYTGKTKPE 316

Query: 72  N 70
           N
Sbjct: 317 N 317


>sp|Q14112|NID2_HUMAN Nidogen-2 OS=Homo sapiens GN=NID2 PE=1 SV=2
          Length = 1375

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -3

Query: 192 EDKINGHY-LELSFKHKNRQKPLGGSITLDPPNTQG 88
           E+ +NGH  +++SF+ K   KPL  S TLDP   +G
Sbjct: 333 EEALNGHSSIDVSFQSKVDTKPLEESSTLDPHTKEG 368


>sp|Q17BA4|MED15_AEDAE Mediator of RNA polymerase II transcription
           subunit 15 OS=Aedes aegypti GN=MED15 PE=3 SV=1
          Length = 779

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 174 HYLELSFKHKNRQKPLGGSITLDPPNTQG 88
           H  E++ K+KN+Q P GGS     PN QG
Sbjct: 62  HVREMNTKNKNQQNPAGGSQDGGNPNQQG 90


>sp|Q5RAJ7|NEIL2_PONAB Endonuclease VIII-like 2 OS=Pongo abelii
           GN=NEIL2 PE=2 SV=3
          Length = 332

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -3

Query: 231 RLGPAYLASLRIREDKINGHYLELSFKHKNRQKPLGGSITLDPPNTQGKTKPKNKP 64
           +L PA L  L +++ ++NG  L L F       P G S   +PP  + + +    P
Sbjct: 31  KLQPASLQCLWLQDTQVNGKKLFLRFDPDEEMGPPGSSPPPEPPQKEAQKEGAADP 86

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945561|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_L12, 5'
         (302 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******