DK945570
Clone id YMU02A01NGRL0009_M04
Library
Length 528
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_M04. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GCAATGAAGCAGGTTGTGTCACAGCTCAAATGTACAGCTATTCAGCTCCGCAATGACTAC
TACAATGTTCTGGAGCTTCCACGACTTCTTGGGTGCATTGCACTATTTTGCAAGGCTGGT
CCGGGTTTTACTGAAGTGAAGTCTCTACATACTCAGTTACTATTCGTTGATAACAATCCT
TCAGTTCGTTCAGAGGATATTGTCGATCAAGTTACCCTCTTGTAATGGCGACCACATAAA
GTCTGCTATTGATTGTCAACGGTGAACTCTTGTGTCATCTCAGCCACTATAAGAAGTCCA
GTCTCTTGAATGCTGTAAGAACAATACGCCTGGTAAAAGCAAGCACCAAGTTTTTCTGAT
GCCTTGGAAGTGAAGGAGAAGTGAGCTTCGATGCCCCTCTATTTTCATAATGACAATTGT
GGGCAGGTTGTTTTCCTGTGCCTGCTCAGCAGACAGATTGTAGCAAAATAACTTCCACCT
CAGAGGTGGTTTGCAGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q68SA9
Definition sp|Q68SA9|ATS7_MOUSE A disintegrin and metalloproteinase with thrombospondin motifs 7 OS=Mus musculus
Align length 45
Score (bit) 31.2
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945570|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_M04, 5'
(498 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q68SA9|ATS7_MOUSE A disintegrin and metalloproteinase with th... 31 2.8
sp|Q1EHB3|ATS7_RAT A disintegrin and metalloproteinase with thro... 31 3.6
sp|Q9UKP4|ATS7_HUMAN A disintegrin and metalloproteinase with th... 30 8.0

>sp|Q68SA9|ATS7_MOUSE A disintegrin and metalloproteinase with
thrombospondin motifs 7 OS=Mus musculus GN=Adamts7 PE=1
SV=2
Length = 1657

Score = 31.2 bits (69), Expect = 2.8
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -3

Query: 169 QRIVT----EYVETSLQ*NPDQPCKIVQCTQEVVEAPEHCSSHCG 47
QR+VT E SL+ N +PC CTQ VV CS+ CG
Sbjct: 1513 QRLVTCPEPGLCEESLRPNNSRPCNTHPCTQWVVGPWGQCSAPCG 1557


>sp|Q1EHB3|ATS7_RAT A disintegrin and metalloproteinase with
thrombospondin motifs 7 OS=Rattus norvegicus GN=Adamts7
PE=1 SV=1
Length = 1595

Score = 30.8 bits (68), Expect = 3.6
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -3

Query: 169 QRIVT----EYVETSLQ*NPDQPCKIVQCTQEVVEAPEHCSSHCG 47
QR+VT E SL+ N +PC CTQ VV CS+ CG
Sbjct: 1451 QRLVTCPEPGLCEESLRPNNTRPCNTHPCTQWVVGPWGQCSAPCG 1495


>sp|Q9UKP4|ATS7_HUMAN A disintegrin and metalloproteinase with
thrombospondin motifs 7 OS=Homo sapiens GN=ADAMTS7 PE=1
SV=2
Length = 1686

Score = 29.6 bits (65), Expect = 8.0
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3

Query: 169 QRIVT----EYVETSLQ*NPDQPCKIVQCTQEVVEAPEHCSSHCG 47
QR+VT E +L+ N +PC CTQ VV CS CG
Sbjct: 1542 QRLVTCPEPGLCEEALRPNTTRPCNTHPCTQWVVGPWGQCSGPCG 1586


tr_hit_id B3PH70
Definition tr|B3PH70|B3PH70_CELJU Radical SAM domain protein protein OS=Cellvibrio japonicus (strain Ueda107)
Align length 45
Score (bit) 32.7
E-value 9.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945570|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_M04, 5'
(498 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3PH70|B3PH70_CELJU Radical SAM domain protein protein OS=Cel... 33 9.8

>tr|B3PH70|B3PH70_CELJU Radical SAM domain protein protein
OS=Cellvibrio japonicus (strain Ueda107) GN=CJA_0267
PE=4 SV=1
Length = 413

Score = 32.7 bits (73), Expect = 9.8
Identities = 12/45 (26%), Positives = 29/45 (64%)
Frame = -2

Query: 230 RHYKRVT*STISSERTEGLLSTNSN*VCRDFTSVKPGPALQNSAM 96
R+ + + I + T+GL+S N N +C D+ ++P P+++++++
Sbjct: 270 RYSENTRYNAIIAVTTDGLMSVNDNLMCTDWRKMQPSPSIKDTSL 314