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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945591
Clone id YMU02A01NGRL0009_N04
Library
Length 560
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_N04. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAAATTGCAGGCTGGAGTAGACAAACTTGCAGATTTGGTGGGTGTTACCCTAGGCCCCAA
GGGCAGAAATGTAGTGCTTGAGAGCAAATATGGACCTCCGAAAATCGTGAATGACGGAGT
GACTGTTGCCAAGGAGGTTGAGCTTGAAGATCCTGTTGAAAATATTGGAGCAAGACTGGT
CAGGCAAGCGGCTTCCAAAACAAATGATTTGGCTGGAGATGGAACCACCACATCAGTTGT
TCTCGCACAGGGCCTTATTGCGGAGGGTGTCAAGATAGTTGCTGCAGGTGCAAATCCCAT
ACAACTCTCAAGAGGTATTGAGAAGACAGTCAAGGCGTTGGTTGCAGAGCTCAAAACCAT
GTCCAAAGAGGTGGAGGACAGTGAGCTTGCCGATGTCGCTGCCGTAAGTGCTGGCAACGA
TTATGAAATTGGTAACATGATTGCAAATGCCCTGGGCAAAGTGGGTCGAAAAGGTGTGGT
CACGCTTGAGGAGGCTCGGAGTGCGGAGAGTAGTCTTTATGTTGTTGAGGGTATGCAGTT
TGATAGGGGCTACATATCTC
■■Homology search results ■■ -
sp_hit_id P08927
Definition sp|P08927|RUBB_PEA RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum
Align length 186
Score (bit) 320.0
E-value 4.0e-87
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945591|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_N04, 5'
         (560 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P08927|RUBB_PEA RuBisCO large subunit-binding protein subunit...   320   4e-87
sp|P21240|RUBB_ARATH RuBisCO large subunit-binding protein subun...   313   5e-85
sp|P21241|RUBB_BRANA RuBisCO large subunit-binding protein subun...   312   6e-85
sp|Q43831|RUBB_SECCE RuBisCO large subunit-binding protein subun...   262   7e-70
sp|Q7MBB4|CH602_GLOVI 60 kDa chaperonin 2 OS=Gloeobacter violace...   244   2e-64
sp|B0CFQ6|CH601_ACAM1 60 kDa chaperonin 1 OS=Acaryochloris marin...   241   1e-63
sp|Q3M6L5|CH602_ANAVT 60 kDa chaperonin 2 OS=Anabaena variabilis...   238   1e-62
sp|Q8YVS8|CH602_ANASP 60 kDa chaperonin 2 OS=Anabaena sp. (strai...   238   1e-62
sp|Q7MBC7|CH601_GLOVI 60 kDa chaperonin 1 OS=Gloeobacter violace...   238   2e-62
sp|Q7WVY0|CH602_ANASL 60 kDa chaperonin 2 OS=Anabaena sp. (strai...   234   2e-61
sp|Q119S1|CH601_TRIEI 60 kDa chaperonin 1 OS=Trichodesmium eryth...   234   2e-61
sp|Q2JUN7|CH602_SYNJA 60 kDa chaperonin 2 OS=Synechococcus sp. (...   234   2e-61
sp|P0A338|CH602_THEVL 60 kDa chaperonin 2 OS=Thermosynechococcus...   234   3e-61
sp|P0A337|CH602_THEEB 60 kDa chaperonin 2 OS=Thermosynechococcus...   234   3e-61
sp|Q2JKV7|CH602_SYNJB 60 kDa chaperonin 2 OS=Synechococcus sp. G...   234   3e-61
sp|Q2JL43|CH601_SYNJB 60 kDa chaperonin 1 OS=Synechococcus sp. G...   234   3e-61
sp|Q2JXD4|CH601_SYNJA 60 kDa chaperonin 1 OS=Synechococcus sp. (...   233   6e-61
sp|A4XJ09|CH60_CALS8 60 kDa chaperonin OS=Caldicellulosiruptor s...   231   1e-60
sp|Q9XCA9|CH60_RHOMR 60 kDa chaperonin OS=Rhodothermus marinus G...   231   2e-60
sp|O50323|CH601_THEVL 60 kDa chaperonin 1 OS=Thermosynechococcus...   231   2e-60
sp|Q05972|CH601_SYNY3 60 kDa chaperonin 1 OS=Synechocystis sp. (...   230   3e-60
sp|P22879|CH60_SYNE7 60 kDa chaperonin OS=Synechococcus elongatu...   230   4e-60
sp|P12834|CH601_SYNP6 60 kDa chaperonin 1 OS=Synechococcus sp. (...   230   4e-60
sp|Q8DMD4|CH60_THEEB 60 kDa chaperonin OS=Thermosynechococcus el...   229   5e-60
sp|A0M7D9|CH60_GRAFK 60 kDa chaperonin OS=Gramella forsetii (str...   229   5e-60
sp|A6UNR2|CH60_METVS 60 kDa chaperonin OS=Methanococcus vannieli...   229   9e-60
sp|Q10WQ4|CH602_TRIEI 60 kDa chaperonin 2 OS=Trichodesmium eryth...   228   1e-59
sp|Q11U19|CH60_CYTH3 60 kDa chaperonin OS=Cytophaga hutchinsonii...   228   2e-59
sp|P61439|CH60_LEPIN 60 kDa chaperonin OS=Leptospira interrogans...   227   3e-59
sp|A4IJV3|CH60_GEOTN 60 kDa chaperonin OS=Geobacillus thermodeni...   227   3e-59

>sp|P08927|RUBB_PEA RuBisCO large subunit-binding protein subunit
           beta, chloroplastic OS=Pisum sativum PE=1 SV=2
          Length = 595

 Score =  320 bits (819), Expect = 4e-87
 Identities = 166/186 (89%), Positives = 178/186 (95%)
 Frame = +2

Query: 2   KLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLV 181
           KLQ GV+KLADLVGVTLGPKGRNVVLESKYG PKIVNDGVTVAKEVELEDPVENIGA+LV
Sbjct: 64  KLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLV 123

Query: 182 RQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTM 361
           RQAA+KTNDLAGDGTTTSVVLAQGLIAEGVK+VAAGANP+ ++RGIEKT KALVAELK M
Sbjct: 124 RQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVAELKKM 183

Query: 362 SKEVEDSELADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQF 541
           SKEVEDSELADVAAVSAGN++E+GNMIA AL KVGRKGVVTLEE +SAE+SLYVVEGMQF
Sbjct: 184 SKEVEDSELADVAAVSAGNNHEVGNMIAEALSKVGRKGVVTLEEGKSAENSLYVVEGMQF 243

Query: 542 DRGYIS 559
           DRGYIS
Sbjct: 244 DRGYIS 249


>sp|P21240|RUBB_ARATH RuBisCO large subunit-binding protein subunit
           beta, chloroplastic OS=Arabidopsis thaliana GN=At1g55490
           PE=1 SV=3
          Length = 600

 Score =  313 bits (801), Expect = 5e-85
 Identities = 161/186 (86%), Positives = 176/186 (94%)
 Frame = +2

Query: 2   KLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLV 181
           +LQAGV+KLADLVGVTLGPKGRNVVLESKYG P+IVNDGVTVA+EVELEDPVENIGA+LV
Sbjct: 70  RLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLV 129

Query: 182 RQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTM 361
           RQAA+KTNDLAGDGTTTSVVLAQG IAEGVK+VAAGANP+ ++RGIEKT KALV ELK M
Sbjct: 130 RQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVTELKKM 189

Query: 362 SKEVEDSELADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQF 541
           SKEVEDSELADVAAVSAGN+ EIGNMIA A+ KVGRKGVVTLEE +SAE++LYVVEGMQF
Sbjct: 190 SKEVEDSELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVTLEEGKSAENNLYVVEGMQF 249

Query: 542 DRGYIS 559
           DRGYIS
Sbjct: 250 DRGYIS 255


>sp|P21241|RUBB_BRANA RuBisCO large subunit-binding protein subunit
           beta, chloroplastic OS=Brassica napus PE=2 SV=1
          Length = 588

 Score =  312 bits (800), Expect = 6e-85
 Identities = 160/186 (86%), Positives = 177/186 (95%)
 Frame = +2

Query: 2   KLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLV 181
           KLQAGV+KLADLVGVTLGPKGRNVVLESKYG P+IVNDGVTVA+EVELEDPVENIGA+LV
Sbjct: 70  KLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLV 129

Query: 182 RQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTM 361
           RQAA+KTNDLAGDGTTTSVVLAQG IAEGVK+VAAGANP+ ++RGIEKT KALVAELK M
Sbjct: 130 RQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVAELKKM 189

Query: 362 SKEVEDSELADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQF 541
           SKEVEDSELADVAAVSAGN+ EIG+MIA A+ +VGRKGVVTLEE +SAE++LYVVEGMQF
Sbjct: 190 SKEVEDSELADVAAVSAGNNAEIGSMIAEAMSRVGRKGVVTLEEGKSAENALYVVEGMQF 249

Query: 542 DRGYIS 559
           DRGY+S
Sbjct: 250 DRGYVS 255


>sp|Q43831|RUBB_SECCE RuBisCO large subunit-binding protein subunit
           beta, chloroplastic (Fragment) OS=Secale cereale
           GN=CPN60 PE=2 SV=1
          Length = 499

 Score =  262 bits (670), Expect = 7e-70
 Identities = 133/154 (86%), Positives = 148/154 (96%)
 Frame = +2

Query: 98  PKIVNDGVTVAKEVELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKI 277
           P+IVNDGVTVA+EVELEDPVENIGA+LVRQAA+KTNDLAGDGTTTSVVLAQGLIAEGVK+
Sbjct: 1   PQIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKV 60

Query: 278 VAAGANPIQLSRGIEKTVKALVAELKTMSKEVEDSELADVAAVSAGNDYEIGNMIANALG 457
           +AAGANP+Q++RGIEKT KALV ELK MSKEVEDSELADVAAVSAGN+YEIGNMIA A+ 
Sbjct: 61  IAAGANPVQITRGIEKTAKALVLELKKMSKEVEDSELADVAAVSAGNNYEIGNMIAEAMS 120

Query: 458 KVGRKGVVTLEEARSAESSLYVVEGMQFDRGYIS 559
           KVGRKGVVTLEE RS+E++LYVVEGMQF+RGYIS
Sbjct: 121 KVGRKGVVTLEEGRSSENNLYVVEGMQFERGYIS 154


>sp|Q7MBB4|CH602_GLOVI 60 kDa chaperonin 2 OS=Gloeobacter violaceus
           GN=groL2 PE=3 SV=1
          Length = 553

 Score =  244 bits (624), Expect = 2e-64
 Identities = 122/186 (65%), Positives = 156/186 (83%), Gaps = 1/186 (0%)
 Frame = +2

Query: 5   LQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLVR 184
           L+ GV+ LAD V VTLGPKGRNVVLE K+G P+IVNDGVT+AKE+ELEDP+EN GA+L+R
Sbjct: 15  LERGVNALADAVRVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDPLENTGAQLIR 74

Query: 185 QAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTMS 364
           + ASKTND+AGDGTTT+ VLAQ LI EG++ VAAGANP+ L RG+EKTV  LV E+  M+
Sbjct: 75  EVASKTNDVAGDGTTTATVLAQALIREGLRNVAAGANPMSLKRGMEKTVAKLVQEIAAMA 134

Query: 365 KEVEDSE-LADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQF 541
           K VED++ +A+VA +S+GND EIG MIA A+ KVG++GV+T+EE++S  + L VVEGMQF
Sbjct: 135 KPVEDNKTIAEVATISSGNDEEIGQMIAEAMDKVGKEGVITVEESKSLVTELDVVEGMQF 194

Query: 542 DRGYIS 559
           D+GY+S
Sbjct: 195 DKGYVS 200


>sp|B0CFQ6|CH601_ACAM1 60 kDa chaperonin 1 OS=Acaryochloris marina
           (strain MBIC 11017) GN=groL1 PE=3 SV=1
          Length = 558

 Score =  241 bits (616), Expect = 1e-63
 Identities = 118/185 (63%), Positives = 150/185 (81%)
 Frame = +2

Query: 5   LQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLVR 184
           L+ GV+ LAD V +TLGPKGRNVVLE K+G P+I+NDGVT+AKEVELEDP+EN GA+L+R
Sbjct: 15  LERGVNSLADAVRITLGPKGRNVVLEKKFGAPQIINDGVTIAKEVELEDPLENAGAQLMR 74

Query: 185 QAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTMS 364
           + ASKTND+AGDGTTT+ VLAQ LI EG+K VAAGANP+ L +GI+KT+ ALV E++  S
Sbjct: 75  EVASKTNDVAGDGTTTATVLAQALIREGLKNVAAGANPVALRKGIDKTIDALVKEIEAKS 134

Query: 365 KEVEDSELADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQFD 544
           K V    +A VA +SAGND E+G MIA A+ KVG+ GV+T+EE++S  + + +VEGMQ D
Sbjct: 135 KPVAGDAIAQVATISAGNDTEVGQMIAQAMDKVGKDGVITVEESKSLATEMEIVEGMQID 194

Query: 545 RGYIS 559
           RGYIS
Sbjct: 195 RGYIS 199


>sp|Q3M6L5|CH602_ANAVT 60 kDa chaperonin 2 OS=Anabaena variabilis
           (strain ATCC 29413 / PCC 7937) GN=groL2 PE=3 SV=2
          Length = 560

 Score =  238 bits (608), Expect = 1e-62
 Identities = 119/185 (64%), Positives = 150/185 (81%)
 Frame = +2

Query: 5   LQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLVR 184
           L+ GV+ LAD V +TLGPKGRNV+LE KYG P+IVNDG+TVAKE+ELEDP+EN GARL++
Sbjct: 15  LERGVNALADAVKITLGPKGRNVLLEKKYGTPQIVNDGITVAKEIELEDPLENTGARLIQ 74

Query: 185 QAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTMS 364
           + A+KT D+AGDGTTT+ VL Q LI EG+K VAAG+NP+ L RGI+KT +ALVAE+  ++
Sbjct: 75  EVAAKTKDVAGDGTTTATVLVQALIKEGLKNVAAGSNPVSLKRGIDKTTEALVAEIAKVA 134

Query: 365 KEVEDSELADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQFD 544
           K VE S +A VA VSAGND E+G MIA A+ KV + GV+T+EE++S  + L VVEGMQ D
Sbjct: 135 KPVEGSAIAQVATVSAGNDEEVGAMIAQAVEKVTKDGVITVEESKSLTTELDVVEGMQID 194

Query: 545 RGYIS 559
           RGYIS
Sbjct: 195 RGYIS 199


>sp|Q8YVS8|CH602_ANASP 60 kDa chaperonin 2 OS=Anabaena sp. (strain
           PCC 7120) GN=groL2 PE=3 SV=1
          Length = 560

 Score =  238 bits (608), Expect = 1e-62
 Identities = 119/185 (64%), Positives = 149/185 (80%)
 Frame = +2

Query: 5   LQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLVR 184
           L+ GV+ LAD V +TLGPKGRNV+LE KYG P+IVNDG+TVAKE+ELEDP+EN GARL++
Sbjct: 15  LERGVNALADAVKITLGPKGRNVLLEKKYGTPQIVNDGITVAKEIELEDPLENTGARLIQ 74

Query: 185 QAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTMS 364
           + ASKT D+AGDGTTT+ VL Q LI EG+K VAAG NP+ L RGI+KT +ALVAE+  ++
Sbjct: 75  EVASKTKDVAGDGTTTATVLVQALIREGLKNVAAGTNPVSLKRGIDKTTEALVAEIAKVA 134

Query: 365 KEVEDSELADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQFD 544
           K VE S +A VA VS+GND E+G MIA A+ KV + GV+T+EE++S  + L VVEGMQ D
Sbjct: 135 KPVEGSAIAQVATVSSGNDEEVGAMIAQAVEKVTKDGVITVEESKSLTTELEVVEGMQID 194

Query: 545 RGYIS 559
           RGYIS
Sbjct: 195 RGYIS 199


>sp|Q7MBC7|CH601_GLOVI 60 kDa chaperonin 1 OS=Gloeobacter violaceus
           GN=groL1 PE=3 SV=1
          Length = 542

 Score =  238 bits (606), Expect = 2e-62
 Identities = 119/186 (63%), Positives = 155/186 (83%), Gaps = 1/186 (0%)
 Frame = +2

Query: 5   LQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLVR 184
           L+ G+D LA+ V VTLGPKGRNVVLE K+G P+I+NDGVT+AKE+ELE+ +EN GA+L++
Sbjct: 15  LERGIDALANAVRVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELENKLENTGAQLIK 74

Query: 185 QAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTMS 364
           + ASKTND+AGDGTTT+ VLAQ L+ EG+K VAAG+NP+ L RG+EKTV+ LVAEL+ ++
Sbjct: 75  EVASKTNDVAGDGTTTACVLAQSLVKEGLKNVAAGSNPMNLKRGMEKTVRHLVAELEKVA 134

Query: 365 KEVEDSE-LADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQF 541
           K VE S+ +A VAAVSAGND EIG MIA A+  VG++GV+T+EE++S  + L V EGMQF
Sbjct: 135 KPVEGSQAIAQVAAVSAGNDDEIGEMIARAMETVGKEGVITVEESKSLTTELEVTEGMQF 194

Query: 542 DRGYIS 559
           DRGY+S
Sbjct: 195 DRGYVS 200


>sp|Q7WVY0|CH602_ANASL 60 kDa chaperonin 2 OS=Anabaena sp. (strain
           L31) GN=groL2 PE=1 SV=1
          Length = 557

 Score =  234 bits (598), Expect = 2e-61
 Identities = 117/185 (63%), Positives = 147/185 (79%)
 Frame = +2

Query: 5   LQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLVR 184
           L+ GV+ LAD V +TLGPKGRNV+LE KYG P+IVNDG+TVAKE+ELEDP+EN GARL++
Sbjct: 15  LERGVNALADAVKITLGPKGRNVLLEKKYGTPQIVNDGITVAKEIELEDPLENTGARLIQ 74

Query: 185 QAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTMS 364
           + ASKT D+AGDGTTT+ VL Q LI EG+K VAAG NP+ L RGI+KT +ALV E+  ++
Sbjct: 75  EVASKTKDVAGDGTTTATVLVQALIKEGLKNVAAGINPVSLKRGIDKTTEALVEEIAKVA 134

Query: 365 KEVEDSELADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQFD 544
           K VE S +A VA VSAGND E+G MIA A+ +V + GV+T+EE++S  + L VVEGM  D
Sbjct: 135 KPVEGSAIAQVATVSAGNDEEVGGMIAEAVERVTKDGVITVEESKSLTTELDVVEGMHID 194

Query: 545 RGYIS 559
           RGYIS
Sbjct: 195 RGYIS 199
tr_hit_id A9NV22
Definition tr|A9NV22|A9NV22_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 186
Score (bit) 324.0
E-value 2.0e-87
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945591|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_N04, 5'
         (560 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NV22|A9NV22_PICSI Putative uncharacterized protein OS=Picea...   324   2e-87
tr|Q9FHA9|Q9FHA9_ARATH RuBisCO subunit binding-protein beta subu...   323   5e-87
tr|Q0WRG9|Q0WRG9_ARATH RuBisCO subunit binding-protein beta subu...   323   5e-87
tr|A7P765|A7P765_VITVI Chromosome chr9 scaffold_7, whole genome ...   319   6e-86
tr|A9PF58|A9PF58_POPTR Putative uncharacterized protein OS=Popul...   318   2e-85
tr|Q9LWT6|Q9LWT6_ORYSJ Os06g0114000 protein OS=Oryza sativa subs...   317   2e-85
tr|A3B7Q6|A3B7Q6_ORYSJ Putative uncharacterized protein OS=Oryza...   317   2e-85
tr|Q6ZFJ9|Q6ZFJ9_ORYSJ Os02g0102900 protein OS=Oryza sativa subs...   317   3e-85
tr|B8AGV6|B8AGV6_ORYSI Putative uncharacterized protein OS=Oryza...   317   3e-85
tr|A3A263|A3A263_ORYSJ Putative uncharacterized protein OS=Oryza...   317   3e-85
tr|A9RLL2|A9RLL2_PHYPA Predicted protein OS=Physcomitrella paten...   316   5e-85
tr|A7P0B1|A7P0B1_VITVI Chromosome chr6 scaffold_3, whole genome ...   316   6e-85
tr|A9RKJ5|A9RKJ5_PHYPA Predicted protein OS=Physcomitrella paten...   315   8e-85
tr|A9TNZ2|A9TNZ2_PHYPA Predicted protein OS=Physcomitrella paten...   314   2e-84
tr|B6SH83|B6SH83_MAIZE RuBisCO large subunit-binding protein sub...   313   4e-84
tr|P93570|P93570_SOLTU Chaperonin-60 beta subunit OS=Solanum tub...   312   9e-84
tr|B6THN2|B6THN2_MAIZE RuBisCO large subunit-binding protein sub...   311   1e-83
tr|Q9LJE4|Q9LJE4_ARATH GloEL protein; chaperonin, 60 kDa OS=Arab...   311   2e-83
tr|Q0W9E2|Q0W9E2_SOLCO Beta chaperonin 60 OS=Solanum commersonii...   302   9e-81
tr|A7PNB9|A7PNB9_VITVI Chromosome chr1 scaffold_22, whole genome...   285   9e-76
tr|Q9C667|Q9C667_ARATH Chaperonin, putative OS=Arabidopsis thali...   274   2e-72
tr|Q56XN6|Q56XN6_ARATH Chaperonin OS=Arabidopsis thaliana GN=At1...   274   2e-72
tr|Q015D7|Q015D7_OSTTA RUBISCO SUBUNIT BINDING-PROTEIN BETA-2 SU...   273   5e-72
tr|A4S076|A4S076_OSTLU Chaperonin 60 beta chain, chloroplast OS=...   272   1e-71
tr|B8BJN0|B8BJN0_ORYSI Putative uncharacterized protein OS=Oryza...   270   5e-71
tr|A8ITH8|A8ITH8_CHLRE Chaperonin 60B2 OS=Chlamydomonas reinhard...   260   3e-68
tr|A3AU66|A3AU66_ORYSJ Putative uncharacterized protein OS=Oryza...   253   5e-66
tr|A8JE91|A8JE91_CHLRE Chaperonin 60B1 OS=Chlamydomonas reinhard...   252   8e-66
tr|B8HWB3|B8HWB3_9CHRO Chaperonin GroEL OS=Cyanothece sp. PCC 74...   243   4e-63
tr|B2IXD2|B2IXD2_NOSP7 Chaperonin GroEL OS=Nostoc punctiforme (s...   239   7e-62

>tr|A9NV22|A9NV22_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 617

 Score =  324 bits (830), Expect = 2e-87
 Identities = 167/186 (89%), Positives = 180/186 (96%)
 Frame = +2

Query: 2   KLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLV 181
           KLQAGV+KLADLVGVTLGPKGRNVVLESKYG PKIVNDGVTVAKEVELEDPVENIGA+LV
Sbjct: 87  KLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLV 146

Query: 182 RQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTM 361
           RQAA+KTNDLAGDGTTTSVVLAQGLI EGVK+VAAGANPIQ++RGIEKTVKALV+ELK+ 
Sbjct: 147 RQAAAKTNDLAGDGTTTSVVLAQGLIGEGVKVVAAGANPIQITRGIEKTVKALVSELKSF 206

Query: 362 SKEVEDSELADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQF 541
           SKEVEDSELADVAAVSAGN+YEIGNMIA A+ KVGRKGVVTLEE +SAE++LYVVEGMQF
Sbjct: 207 SKEVEDSELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLEEGKSAENNLYVVEGMQF 266

Query: 542 DRGYIS 559
           DRGYIS
Sbjct: 267 DRGYIS 272


>tr|Q9FHA9|Q9FHA9_ARATH RuBisCO subunit binding-protein beta
           subunit; chaperonin, 60 kDa OS=Arabidopsis thaliana PE=3
           SV=1
          Length = 596

 Score =  323 bits (827), Expect = 5e-87
 Identities = 166/186 (89%), Positives = 179/186 (96%)
 Frame = +2

Query: 2   KLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLV 181
           KLQAGV+KLADLVGVTLGPKGRNVVLESKYG P+IVNDGVTVA+EVELEDPVENIGA+LV
Sbjct: 66  KLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLV 125

Query: 182 RQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTM 361
           RQAASKTNDLAGDGTTTSVVLAQGLIAEGVK+VAAGANP+ ++RGIEKT KALVAELK M
Sbjct: 126 RQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTKALVAELKKM 185

Query: 362 SKEVEDSELADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQF 541
           SKEVEDSELADVAAVSAGN+YE+GNMIA A+ KVGRKGVVTLEE +SAE+SLYVVEGMQF
Sbjct: 186 SKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVTLEEGKSAENSLYVVEGMQF 245

Query: 542 DRGYIS 559
           DRGYIS
Sbjct: 246 DRGYIS 251


>tr|Q0WRG9|Q0WRG9_ARATH RuBisCO subunit binding-protein beta subunit
           OS=Arabidopsis thaliana GN=At5g56500 PE=2 SV=1
          Length = 597

 Score =  323 bits (827), Expect = 5e-87
 Identities = 166/186 (89%), Positives = 179/186 (96%)
 Frame = +2

Query: 2   KLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLV 181
           KLQAGV+KLADLVGVTLGPKGRNVVLESKYG P+IVNDGVTVA+EVELEDPVENIGA+LV
Sbjct: 66  KLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLV 125

Query: 182 RQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTM 361
           RQAASKTNDLAGDGTTTSVVLAQGLIAEGVK+VAAGANP+ ++RGIEKT KALVAELK M
Sbjct: 126 RQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTKALVAELKKM 185

Query: 362 SKEVEDSELADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQF 541
           SKEVEDSELADVAAVSAGN+YE+GNMIA A+ KVGRKGVVTLEE +SAE+SLYVVEGMQF
Sbjct: 186 SKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVTLEEGKSAENSLYVVEGMQF 245

Query: 542 DRGYIS 559
           DRGYIS
Sbjct: 246 DRGYIS 251


>tr|A7P765|A7P765_VITVI Chromosome chr9 scaffold_7, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00034341001
           PE=3 SV=1
          Length = 634

 Score =  319 bits (818), Expect = 6e-86
 Identities = 164/186 (88%), Positives = 177/186 (95%)
 Frame = +2

Query: 2   KLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLV 181
           KLQ GV+KLADLVGVTLGPKGRNVVLESKYG PKIVNDGVTVA+EVELEDPVENIGARLV
Sbjct: 79  KLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREVELEDPVENIGARLV 138

Query: 182 RQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTM 361
           RQAASKTNDLAGDGTTTSVVLAQGLI EGVK+VAAGANP+Q++RGIE T KALVAELK M
Sbjct: 139 RQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVQITRGIENTTKALVAELKLM 198

Query: 362 SKEVEDSELADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQF 541
           SKEVEDSELADVAAVSAGN+YE+G MIA A+G+VGRKGVVTLEE +SAE++LYVVEGMQF
Sbjct: 199 SKEVEDSELADVAAVSAGNNYEVGYMIAEAMGQVGRKGVVTLEEGKSAENNLYVVEGMQF 258

Query: 542 DRGYIS 559
           DRGYIS
Sbjct: 259 DRGYIS 264


>tr|A9PF58|A9PF58_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 607

 Score =  318 bits (814), Expect = 2e-85
 Identities = 163/186 (87%), Positives = 177/186 (95%)
 Frame = +2

Query: 2   KLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLV 181
           KLQ GV+KLADLVGVTLGPKGRNVVLESKYG PKIVNDGVTVAKEVELEDPVENIGA+LV
Sbjct: 77  KLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLV 136

Query: 182 RQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTM 361
           RQAA+KTNDLAGDGTTTSVVLAQGLIAEGVK+VAAGANP+ ++RGIEKT +ALV ELK M
Sbjct: 137 RQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTRALVNELKLM 196

Query: 362 SKEVEDSELADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQF 541
           SKEVEDSELADVAAVSAGN+YE+GNMIA A+ KVGRKGVVTLEE +SA++SLYVVEGMQF
Sbjct: 197 SKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSADNSLYVVEGMQF 256

Query: 542 DRGYIS 559
           DRGYIS
Sbjct: 257 DRGYIS 262


>tr|Q9LWT6|Q9LWT6_ORYSJ Os06g0114000 protein OS=Oryza sativa subsp.
           japonica GN=P0541H01.20 PE=2 SV=1
          Length = 601

 Score =  317 bits (813), Expect = 2e-85
 Identities = 162/186 (87%), Positives = 178/186 (95%)
 Frame = +2

Query: 2   KLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLV 181
           KLQ GV+KLADLVGVTLGPKGRNVVLESKYG P+IVNDGVTVA+EVELEDPVENIGA+LV
Sbjct: 71  KLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLV 130

Query: 182 RQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTM 361
           RQAA+KTNDLAGDGTTTSVVLAQGLIAEGVK+VAAGANP+Q++RGIEKT KALV ELK +
Sbjct: 131 RQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEELKKL 190

Query: 362 SKEVEDSELADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQF 541
           SKEVEDSELADVAAVSAGN+YEIGNMIA A+ KVGRKGVVTLEE RS+E++LYVVEGMQF
Sbjct: 191 SKEVEDSELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLEEGRSSENNLYVVEGMQF 250

Query: 542 DRGYIS 559
           +RGYIS
Sbjct: 251 ERGYIS 256


>tr|A3B7Q6|A3B7Q6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_019078 PE=3 SV=1
          Length = 609

 Score =  317 bits (813), Expect = 2e-85
 Identities = 162/186 (87%), Positives = 178/186 (95%)
 Frame = +2

Query: 2   KLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLV 181
           KLQ GV+KLADLVGVTLGPKGRNVVLESKYG P+IVNDGVTVA+EVELEDPVENIGA+LV
Sbjct: 71  KLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLV 130

Query: 182 RQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTM 361
           RQAA+KTNDLAGDGTTTSVVLAQGLIAEGVK+VAAGANP+Q++RGIEKT KALV ELK +
Sbjct: 131 RQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEELKKL 190

Query: 362 SKEVEDSELADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQF 541
           SKEVEDSELADVAAVSAGN+YEIGNMIA A+ KVGRKGVVTLEE RS+E++LYVVEGMQF
Sbjct: 191 SKEVEDSELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLEEGRSSENNLYVVEGMQF 250

Query: 542 DRGYIS 559
           +RGYIS
Sbjct: 251 ERGYIS 256


>tr|Q6ZFJ9|Q6ZFJ9_ORYSJ Os02g0102900 protein OS=Oryza sativa subsp.
           japonica GN=OJ1435_F07.26 PE=1 SV=1
          Length = 598

 Score =  317 bits (812), Expect = 3e-85
 Identities = 162/186 (87%), Positives = 178/186 (95%)
 Frame = +2

Query: 2   KLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLV 181
           KLQ GV+KLADLVGVTLGPKGRNVVLESKYG PKIVNDGVTVAKEVELEDPVENIGA+LV
Sbjct: 67  KLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLV 126

Query: 182 RQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTM 361
           RQAA+KTNDLAGDGTTTSVVLAQG+I EGVK+VAAGANP+Q++RGIEKT KALV+EL+ M
Sbjct: 127 RQAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAKALVSELQKM 186

Query: 362 SKEVEDSELADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQF 541
           SKEVEDSELADVAAVSAGN+YEIGNMIA A+ KVGR+GVVTLEE +SAE++LYVVEGMQF
Sbjct: 187 SKEVEDSELADVAAVSAGNNYEIGNMIAEAMNKVGRQGVVTLEEGKSAENNLYVVEGMQF 246

Query: 542 DRGYIS 559
           DRGYIS
Sbjct: 247 DRGYIS 252


>tr|B8AGV6|B8AGV6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05469 PE=4 SV=1
          Length = 598

 Score =  317 bits (812), Expect = 3e-85
 Identities = 162/186 (87%), Positives = 178/186 (95%)
 Frame = +2

Query: 2   KLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLV 181
           KLQ GV+KLADLVGVTLGPKGRNVVLESKYG PKIVNDGVTVAKEVELEDPVENIGA+LV
Sbjct: 67  KLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLV 126

Query: 182 RQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTM 361
           RQAA+KTNDLAGDGTTTSVVLAQG+I EGVK+VAAGANP+Q++RGIEKT KALV+EL+ M
Sbjct: 127 RQAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAKALVSELQKM 186

Query: 362 SKEVEDSELADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQF 541
           SKEVEDSELADVAAVSAGN+YEIGNMIA A+ KVGR+GVVTLEE +SAE++LYVVEGMQF
Sbjct: 187 SKEVEDSELADVAAVSAGNNYEIGNMIAEAMNKVGRQGVVTLEEGKSAENNLYVVEGMQF 246

Query: 542 DRGYIS 559
           DRGYIS
Sbjct: 247 DRGYIS 252


>tr|A3A263|A3A263_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_004885 PE=3 SV=1
          Length = 616

 Score =  317 bits (812), Expect = 3e-85
 Identities = 162/186 (87%), Positives = 178/186 (95%)
 Frame = +2

Query: 2   KLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEVELEDPVENIGARLV 181
           KLQ GV+KLADLVGVTLGPKGRNVVLESKYG PKIVNDGVTVAKEVELEDPVENIGA+LV
Sbjct: 67  KLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLV 126

Query: 182 RQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGIEKTVKALVAELKTM 361
           RQAA+KTNDLAGDGTTTSVVLAQG+I EGVK+VAAGANP+Q++RGIEKT KALV+EL+ M
Sbjct: 127 RQAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAKALVSELQKM 186

Query: 362 SKEVEDSELADVAAVSAGNDYEIGNMIANALGKVGRKGVVTLEEARSAESSLYVVEGMQF 541
           SKEVEDSELADVAAVSAGN+YEIGNMIA A+ KVGR+GVVTLEE +SAE++LYVVEGMQF
Sbjct: 187 SKEVEDSELADVAAVSAGNNYEIGNMIAEAMNKVGRQGVVTLEEGKSAENNLYVVEGMQF 246

Query: 542 DRGYIS 559
           DRGYIS
Sbjct: 247 DRGYIS 252