DK945601 |
Clone id |
YMU02A01NGRL0009_N18 |
Library |
YMU02 |
Length |
580 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_N18. 5' end sequence. |
Accession |
DK945601 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL4Contig1 |
Sequence |
CTCTTGCGCAGTGTTTCTACTGCAGGTTGAAGGAGCACTCCGTGGTACGCTCGCAGCAGA TTTGCAGCCATGGGAAAGGAAAAGACTCACATCAACATTGTGGTCATTGGCCATGTCGAC TCTGGAAAGTCCACTACCACTGGACATCTCATCTACAAGCTTGGTGGTATTGACAAGCGT GTCATAGAGCGGTTTGAGAAGGAAGCAGCTGAGATGAACAAGAGGTCATTCAAGTATGCG TGGGTGCTTGACAAACTGAAGGCTGAGCGTGAGCGTGGTATTACCATTGATATTGCCCTG TGGAAGTTTGAGACCACAAAGTATTACTGCACTGTTATTGATGCGCCTGGTCATCGCGAC TTCATCAAGAACATGATTACTGGAACTTCCCAGGCTGACTGTGCTGTCCTGATTATTGAC TCCACAACTGGAGGTTTTGAAGCTGGTATTTCTAAGGATGGACAAACCCGTGAGCATGCC TTGTTGGCTTTTACCCTTGGGGTGAAGCAAATGATTTGTTGCTGCAACAAGATGGATGCC ACAACACCGAAGTACTCCAAGGCCCGGTATGATGAAATCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O64937 |
Definition |
sp|O64937|EF1A_ORYSJ Elongation factor 1-alpha OS=Oryza sativa subsp. japonica |
Align length |
170 |
Score (bit) |
348.0 |
E-value |
8.0e-96 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q3LUM5 |
Definition |
tr|Q3LUM5|Q3LUM5_GOSHI Elongation factor 1-alpha OS=Gossypium hirsutum |
Align length |
170 |
Score (bit) |
348.0 |
E-value |
9.0e-95 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945601|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0009_N18, 5' (580 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q3LUM5|Q3LUM5_GOSHI Elongation factor 1-alpha OS=Gossypium hi... 348 9e-95 tr|Q10QZ6|Q10QZ6_ORYSJ Elongation factor 1-alpha OS=Oryza sativa... 348 9e-95 tr|Q10QZ5|Q10QZ5_ORYSJ Elongation factor 1-alpha, putative, expr... 348 9e-95 tr|O50018|O50018_MAIZE Elongation factor 1-alpha OS=Zea mays GN=... 348 9e-95 tr|B8APM5|B8APM5_ORYSI Putative uncharacterized protein OS=Oryza... 348 9e-95 tr|B6UHJ4|B6UHJ4_MAIZE Elongation factor 1-alpha OS=Zea mays PE=... 348 9e-95 tr|B2KNJ5|B2KNJ5_SACOF Elongation factor OS=Saccharum officinaru... 348 9e-95 tr|A3AEP8|A3AEP8_ORYSJ Elongation factor 1-alpha OS=Oryza sativa... 348 9e-95 tr|A9PG38|A9PG38_POPTR Elongation factor 1-alpha OS=Populus tric... 347 2e-94 tr|Q9M7E5|Q9M7E5_MAIZE Elongation factor 1-alpha OS=Zea mays PE=... 347 3e-94 tr|Q9M7E3|Q9M7E3_MAIZE Elongation factor 1-alpha OS=Zea mays PE=... 347 3e-94 tr|Q6LAA4|Q6LAA4_HORVU Elongation factor 1-alpha OS=Hordeum vulg... 347 3e-94 tr|B6T433|B6T433_MAIZE Elongation factor 1-alpha OS=Zea mays PE=... 347 3e-94 tr|B4FY16|B4FY16_MAIZE Putative uncharacterized protein OS=Zea m... 347 3e-94 tr|Q9ZWH9|Q9ZWH9_NICPA Elongation factor 1-alpha OS=Nicotiana pa... 347 4e-94 tr|Q5J1K3|Q5J1K3_ELAGV Elongation factor 1-alpha OS=Elaeis guine... 347 4e-94 tr|Q58I24|Q58I24_ACTDE Elongation factor 1-alpha OS=Actinidia de... 347 4e-94 tr|Q3LUM6|Q3LUM6_GOSHI Elongation factor 1-alpha OS=Gossypium hi... 347 4e-94 tr|Q3LUM4|Q3LUM4_GOSHI Elongation factor 1-alpha OS=Gossypium hi... 347 4e-94 tr|Q3LUM3|Q3LUM3_GOSHI Elongation factor 1-alpha OS=Gossypium hi... 347 4e-94 tr|Q3LUM2|Q3LUM2_GOSHI Elongation factor 1-alpha OS=Gossypium hi... 347 4e-94 tr|Q3LUM0|Q3LUM0_GOSHI Elongation factor 1-alpha OS=Gossypium hi... 347 4e-94 tr|Q3LUL9|Q3LUL9_GOSHI Elongation factor 1-alpha OS=Gossypium hi... 347 4e-94 tr|Q3LUL8|Q3LUL8_GOSHI Elongation factor 1-alpha OS=Gossypium hi... 347 4e-94 tr|B5LWQ9|B5LWQ9_ZIZJJ Translation elongation factor 1 (Fragment... 347 4e-94 tr|A9NWR1|A9NWR1_PICSI Elongation factor 1-alpha OS=Picea sitche... 347 4e-94 tr|A9NW32|A9NW32_PICSI Elongation factor 1-alpha OS=Picea sitche... 347 4e-94 tr|A9NUF4|A9NUF4_PICSI Elongation factor 1-alpha OS=Picea sitche... 347 4e-94 tr|Q9SPA2|Q9SPA2_LILLO Elongation factor 1-alpha OS=Lilium longi... 346 5e-94 tr|Q9M7E0|Q9M7E0_MAIZE Elongation factor 1-alpha OS=Zea mays PE=... 346 6e-94
>tr|Q3LUM5|Q3LUM5_GOSHI Elongation factor 1-alpha OS=Gossypium hirsutum GN=EF1A2 PE=2 SV=1 Length = 447
Score = 348 bits (894), Expect = 9e-95 Identities = 170/170 (100%), Positives = 170/170 (100%) Frame = +1
Query: 70 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 249 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 250 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 429 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 430 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 579 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
>tr|Q10QZ6|Q10QZ6_ORYSJ Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=Os03g0178000 PE=2 SV=1 Length = 447
Score = 348 bits (894), Expect = 9e-95 Identities = 170/170 (100%), Positives = 170/170 (100%) Frame = +1
Query: 70 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 249 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 250 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 429 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 430 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 579 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
>tr|Q10QZ5|Q10QZ5_ORYSJ Elongation factor 1-alpha, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g08050 PE=4 SV=1 Length = 347
Score = 348 bits (894), Expect = 9e-95 Identities = 170/170 (100%), Positives = 170/170 (100%) Frame = +1
Query: 70 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 249 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 250 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 429 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 430 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 579 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
>tr|O50018|O50018_MAIZE Elongation factor 1-alpha OS=Zea mays GN=EF1-A PE=2 SV=1 Length = 447
Score = 348 bits (894), Expect = 9e-95 Identities = 170/170 (100%), Positives = 170/170 (100%) Frame = +1
Query: 70 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 249 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 250 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 429 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 430 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 579 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
>tr|B8APM5|B8APM5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10237 PE=4 SV=1 Length = 447
Score = 348 bits (894), Expect = 9e-95 Identities = 170/170 (100%), Positives = 170/170 (100%) Frame = +1
Query: 70 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 249 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 250 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 429 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 430 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 579 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
>tr|B6UHJ4|B6UHJ4_MAIZE Elongation factor 1-alpha OS=Zea mays PE=2 SV=1 Length = 447
Score = 348 bits (894), Expect = 9e-95 Identities = 170/170 (100%), Positives = 170/170 (100%) Frame = +1
Query: 70 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 249 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 250 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 429 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 430 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 579 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
>tr|B2KNJ5|B2KNJ5_SACOF Elongation factor OS=Saccharum officinarum PE=2 SV=1 Length = 447
Score = 348 bits (894), Expect = 9e-95 Identities = 170/170 (100%), Positives = 170/170 (100%) Frame = +1
Query: 70 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 249 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 250 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 429 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 430 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 579 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
>tr|A3AEP8|A3AEP8_ORYSJ Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=OsJ_009270 PE=3 SV=1 Length = 435
Score = 348 bits (894), Expect = 9e-95 Identities = 170/170 (100%), Positives = 170/170 (100%) Frame = +1
Query: 70 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 249 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 250 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 429 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 430 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 579 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
>tr|A9PG38|A9PG38_POPTR Elongation factor 1-alpha OS=Populus trichocarpa PE=2 SV=1 Length = 449
Score = 347 bits (891), Expect = 2e-94 Identities = 169/170 (99%), Positives = 170/170 (100%) Frame = +1
Query: 70 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 249 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 250 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 429 DKLKAERERGITIDIALWKFETT+YYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 430 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 579 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
>tr|Q9M7E5|Q9M7E5_MAIZE Elongation factor 1-alpha OS=Zea mays PE=2 SV=1 Length = 447
Score = 347 bits (890), Expect = 3e-94 Identities = 169/170 (99%), Positives = 170/170 (100%) Frame = +1
Query: 70 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 249 MGKEK+HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKSHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 250 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 429 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 430 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 579 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
|