DK945602 |
Clone id |
YMU02A01NGRL0009_N19 |
Library |
YMU02 |
Length |
455 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_N19. 5' end sequence. |
Accession |
DK945602 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL73Contig1 |
Sequence |
GAAGCAGCTTGAAGATGGACGAACACTGGCTGATTACAATATCCAGAAAGAGTCCACCCT CCACCTTGTGCTCAGGTTGAGAGGTGGTGCCAAGAAGAGAAAGAAGAAGACTTACACCAA GCCCAAAAAGCTCAAGCATAAGAAGAAGAAGGTAAAGCTTGCAGTGCTCCAATTCTACAA GGTGGATGACTCTGGGAAGGTGCAACGACTTCGGAAGGAGTGTCCAAATGCTGAATGTGG AGCTGGAACTTTCATGGCCAATCATCATGATCGCCACTACTGCGGCAAGTGTGGCCTGAC CTACGTCTATCAGAAGGCTTGATGTATGTGACTTTCAAAGTCATGTTTTGGATGTAGAAT GAGCAGCTATTGCTCTGCTGAATTTAACTTTTTGAACCGTAATGATGTCACTTACTTTTG GGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P62981 |
Definition |
sp|P62981|RS27A_SOLTU 40S ribosomal protein S27a OS=Solanum tuberosum |
Align length |
54 |
Score (bit) |
114.0 |
E-value |
1.0e-25 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
O04829 |
Definition |
tr|O04829|O04829_SOLTU Ubiquitin extension protein OS=Solanum tuberosum |
Align length |
106 |
Score (bit) |
167.0 |
E-value |
3.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945602|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0009_N19, 5' (425 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|O04829|O04829_SOLTU Ubiquitin extension protein OS=Solanum tu... 167 3e-40 tr|B7FGN8|B7FGN8_MEDTR Putative uncharacterized protein OS=Medic... 167 3e-40 tr|B5LWQ7|B5LWQ7_ZIZJJ Ubiquitin extensive-like protein OS=Zizip... 167 3e-40 tr|A9P863|A9P863_POPTR Putative uncharacterized protein OS=Popul... 167 3e-40 tr|A7Q059|A7Q059_VITVI Chromosome chr8 scaffold_41, whole genome... 167 3e-40 tr|A5B102|A5B102_VITVI Putative uncharacterized protein OS=Vitis... 167 3e-40 tr|A5AGV0|A5AGV0_VITVI Putative uncharacterized protein (Chromos... 167 3e-40 tr|A9XB15|A9XB15_HEVBR Ubiquitin extension protein OS=Hevea bras... 166 4e-40 tr|Q06H21|Q06H21_ARAHY Ubiquitin/ribosomal protein S27a OS=Arach... 166 5e-40 tr|A5C8S5|A5C8S5_VITVI Putative uncharacterized protein (Chromos... 166 7e-40 tr|Q45FL8|Q45FL8_TOBAC Ubiquitin extension protein OS=Nicotiana ... 165 9e-40 tr|Q2QDG1|Q2QDG1_GOSHI Ubiquitin extension protein OS=Gossypium ... 165 9e-40 tr|Q6UCJ3|Q6UCJ3_CUCSA Ubiquitin extension protein OS=Cucumis sa... 165 1e-39 tr|Q5EC25|Q5EC25_NICBE Ubiquitin/s27a 40S ribosomal protein OS=N... 165 1e-39 tr|O49906|O49906_TOBAC Ubiquitin extension protein OS=Nicotiana ... 165 1e-39 tr|A9T8M3|A9T8M3_PHYPA Predicted protein OS=Physcomitrella paten... 165 1e-39 tr|A0MKC8|A0MKC8_CAPAN Ubiquitin extension protein OS=Capsicum a... 165 1e-39 tr|B7FH93|B7FH93_MEDTR Putative uncharacterized protein OS=Medic... 164 2e-39 tr|B3TLP8|B3TLP8_ELAGV Ubiquitin extension protein-like protein ... 164 2e-39 tr|A9P8M2|A9P8M2_POPTR Putative uncharacterized protein OS=Popul... 164 2e-39 tr|Q8W217|Q8W217_PYRCO Ubiquitin extension protein OS=Pyrus comm... 164 3e-39 tr|A9YTY9|A9YTY9_SOLTU Putative ubiquitin extension protein OS=S... 164 3e-39 tr|A9S8F4|A9S8F4_PHYPA Predicted protein OS=Physcomitrella paten... 164 3e-39 tr|A9RJI9|A9RJI9_PHYPA Predicted protein OS=Physcomitrella paten... 164 3e-39 tr|Q9FUL5|Q9FUL5_PRUAV Ubiquitin/ribosomal protein 27a OS=Prunus... 163 4e-39 tr|Q84XC3|Q84XC3_MALDO Ubiquitin/ribosomal fusion protein OS=Mal... 163 4e-39 tr|B8LKJ2|B8LKJ2_PICSI Putative uncharacterized protein OS=Picea... 162 6e-39 tr|Q0MW35|Q0MW35_9ROSA Ubiquitin extension protein OS=Morus bomb... 160 2e-38 tr|Q9ARZ9|Q9ARZ9_ORYSJ cDNA clone:001-043-B08, full insert seque... 154 3e-36 tr|Q5I6U1|Q5I6U1_NICBE Ubiquitin/s27a 40s ribosomal protein OS=N... 154 3e-36
>tr|O04829|O04829_SOLTU Ubiquitin extension protein OS=Solanum tuberosum PE=2 SV=1 Length = 156
Score = 167 bits (422), Expect = 3e-40 Identities = 83/106 (78%), Positives = 83/106 (78%) Frame = +2
Query: 2 KQLEDGRTLADYNIQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAVLQFYK 181 KQLEDGRTLADYNIQKESTLHLVLRLRGGA LAVLQFYK Sbjct: 48 KQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYK 107
Query: 182 VDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 319 VDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 108 VDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|B7FGN8|B7FGN8_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 155
Score = 167 bits (422), Expect = 3e-40 Identities = 83/106 (78%), Positives = 83/106 (78%) Frame = +2
Query: 2 KQLEDGRTLADYNIQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAVLQFYK 181 KQLEDGRTLADYNIQKESTLHLVLRLRGGA LAVLQFYK Sbjct: 48 KQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYK 107
Query: 182 VDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 319 VDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 108 VDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|B5LWQ7|B5LWQ7_ZIZJJ Ubiquitin extensive-like protein OS=Ziziphus jujuba GN=UBQ PE=2 SV=1 Length = 156
Score = 167 bits (422), Expect = 3e-40 Identities = 83/106 (78%), Positives = 83/106 (78%) Frame = +2
Query: 2 KQLEDGRTLADYNIQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAVLQFYK 181 KQLEDGRTLADYNIQKESTLHLVLRLRGGA LAVLQFYK Sbjct: 48 KQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYK 107
Query: 182 VDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 319 VDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 108 VDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|A9P863|A9P863_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 156
Score = 167 bits (422), Expect = 3e-40 Identities = 83/106 (78%), Positives = 83/106 (78%) Frame = +2
Query: 2 KQLEDGRTLADYNIQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAVLQFYK 181 KQLEDGRTLADYNIQKESTLHLVLRLRGGA LAVLQFYK Sbjct: 48 KQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYK 107
Query: 182 VDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 319 VDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 108 VDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|A7Q059|A7Q059_VITVI Chromosome chr8 scaffold_41, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027151001 PE=4 SV=1 Length = 156
Score = 167 bits (422), Expect = 3e-40 Identities = 83/106 (78%), Positives = 83/106 (78%) Frame = +2
Query: 2 KQLEDGRTLADYNIQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAVLQFYK 181 KQLEDGRTLADYNIQKESTLHLVLRLRGGA LAVLQFYK Sbjct: 48 KQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYK 107
Query: 182 VDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 319 VDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 108 VDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|A5B102|A5B102_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036195 PE=4 SV=1 Length = 156
Score = 167 bits (422), Expect = 3e-40 Identities = 83/106 (78%), Positives = 83/106 (78%) Frame = +2
Query: 2 KQLEDGRTLADYNIQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAVLQFYK 181 KQLEDGRTLADYNIQKESTLHLVLRLRGGA LAVLQFYK Sbjct: 48 KQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYK 107
Query: 182 VDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 319 VDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 108 VDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|A5AGV0|A5AGV0_VITVI Putative uncharacterized protein (Chromosome chr7 scaffold_42, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00028185001 PE=4 SV=1 Length = 156
Score = 167 bits (422), Expect = 3e-40 Identities = 83/106 (78%), Positives = 83/106 (78%) Frame = +2
Query: 2 KQLEDGRTLADYNIQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAVLQFYK 181 KQLEDGRTLADYNIQKESTLHLVLRLRGGA LAVLQFYK Sbjct: 48 KQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYK 107
Query: 182 VDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 319 VDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 108 VDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|A9XB15|A9XB15_HEVBR Ubiquitin extension protein OS=Hevea brasiliensis GN=UEP1 PE=2 SV=1 Length = 156
Score = 166 bits (421), Expect = 4e-40 Identities = 82/106 (77%), Positives = 83/106 (78%) Frame = +2
Query: 2 KQLEDGRTLADYNIQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAVLQFYK 181 KQLEDGRTLADYNIQKESTLHLVLRLRGGA LA+LQFYK Sbjct: 48 KQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAILQFYK 107
Query: 182 VDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 319 VDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 108 VDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|Q06H21|Q06H21_ARAHY Ubiquitin/ribosomal protein S27a OS=Arachis hypogaea PE=2 SV=1 Length = 155
Score = 166 bits (420), Expect = 5e-40 Identities = 81/106 (76%), Positives = 83/106 (78%) Frame = +2
Query: 2 KQLEDGRTLADYNIQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAVLQFYK 181 KQLEDGRTLADYNIQKESTLHLVLRLRGGA LA+LQFYK Sbjct: 48 KQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAILQFYK 107
Query: 182 VDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 319 +DDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 108 IDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|A5C8S5|A5C8S5_VITVI Putative uncharacterized protein (Chromosome undetermined scaffold_174, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00006610001 PE=4 SV=1 Length = 156
Score = 166 bits (419), Expect = 7e-40 Identities = 82/106 (77%), Positives = 83/106 (78%) Frame = +2
Query: 2 KQLEDGRTLADYNIQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAVLQFYK 181 KQLEDGRTLADYNIQKESTLHLVLRLRGGA LAVLQFYK Sbjct: 48 KQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYK 107
Query: 182 VDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 319 VDDSGKVQRLRKECPN+ECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 108 VDDSGKVQRLRKECPNSECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
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