DK945612 |
Clone id |
YMU02A01NGRL0009_O07 |
Library |
YMU02 |
Length |
513 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_O07. 5' end sequence. |
Accession |
DK945612 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL2244Contig1 |
Sequence |
CTCAGTACTTCGTGCGCGCGTATGTTCTTGATTCTGCTGGAGAAAAGGTTACATATGGAC AAAGCTCCAATGCTCAAAAGACCAGCAATCTGTTTACGATTGAGCCCATTTCAGGAAGGC ATGCATCAATTGACATAGCCGCAGGTGTCTTTTCCGCCTTCTCTGTGGTTTCTCTTTTTG GTTTCTTCTTCTATGAGAAGATGGGATCCAAGAAGAAGTAATTAAGCCTGATGAAGTCTA ATAAAGCAAAGCACATCAGATGGGTCCTTGCTAAGCCTTTCAAGGACTAAAAGTTACAGA GACTGAAGAATACATCAAGGATTTTTGCTTTGTATGTAGATTTGCACTTTTCATTGCTCT CTATGTGGCTCTCTAGTGTGAAGCCACTCGCTTTTCATATGCGAAAAGAGTGCAAGAGTG CTCGCCAAATTCACTCAATGGATCATTTTGAGTATCTAATGCAACATTTAATTTTCTCAT CCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O06353 |
Definition |
sp|O06353|OTSA_MYCTU Trehalose-phosphate synthase OS=Mycobacterium tuberculosis |
Align length |
38 |
Score (bit) |
30.4 |
E-value |
4.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PCQ4 |
Definition |
tr|A7PCQ4|A7PCQ4_VITVI Chromosome chr17 scaffold_12, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
64 |
Score (bit) |
85.5 |
E-value |
1.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945612|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0009_O07, 5' (483 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PCQ4|A7PCQ4_VITVI Chromosome chr17 scaffold_12, whole genom... 86 1e-15 tr|A5CB21|A5CB21_VITVI Putative uncharacterized protein OS=Vitis... 85 2e-15 tr|Q8S343|Q8S343_CAPAN Putative uncharacterized protein upa10 OS... 83 8e-15 tr|Q4LEX1|Q4LEX1_PHYPA Putative component of high affinity nitra... 79 1e-13 tr|A9SPC3|A9SPC3_PHYPA Predicted protein OS=Physcomitrella paten... 79 1e-13 tr|Q4LEX3|Q4LEX3_PHYPA Putative component of high affinity nitra... 78 2e-13 tr|A9SXC2|A9SXC2_PHYPA Predicted protein OS=Physcomitrella paten... 78 2e-13 tr|Q9FGS5|Q9FGS5_ARATH Genomic DNA, chromosome 5, TAC clone:K6A1... 77 4e-13 tr|Q9ARM2|Q9ARM2_ARATH Putative component of high affinity nitra... 77 4e-13 tr|Q8LE73|Q8LE73_ARATH Putative component of high affinity nitra... 77 4e-13 tr|Q9SB67|Q9SB67_ARATH Putative uncharacterized protein AT4g2472... 76 9e-13 tr|Q1G2Z1|Q1G2Z1_ARATH Putative uncharacterized protein OS=Arabi... 76 9e-13 tr|B3H755|B3H755_ARATH Uncharacterized protein At4g24730.1 OS=Ar... 76 9e-13 tr|Q4LEX2|Q4LEX2_PHYPA Putative component of high affinity nitra... 74 3e-12 tr|A9RML2|A9RML2_PHYPA Predicted protein OS=Physcomitrella paten... 74 3e-12 tr|Q5UBW9|Q5UBW9_WHEAT NAR2.1 OS=Triticum aestivum GN=nar2.1 PE=... 64 5e-09 tr|Q6X678|Q6X678_HORVD NAR2.2 OS=Hordeum vulgare var. distichum ... 62 1e-08 tr|Q5UBW8|Q5UBW8_WHEAT NAR2.2 OS=Triticum aestivum GN=nar2.2 PE=... 62 1e-08 tr|Q6ZI50|Q6ZI50_ORYSJ Os02g0595900 protein OS=Oryza sativa subs... 62 2e-08 tr|A2X6R3|A2X6R3_ORYSI Putative uncharacterized protein OS=Oryza... 62 2e-08 tr|Q6X679|Q6X679_HORVD NAR2.1 OS=Hordeum vulgare var. distichum ... 61 2e-08 tr|Q6X677|Q6X677_HORVD NAR2.3 OS=Hordeum vulgare var. distichum ... 61 2e-08 tr|Q0VH26|Q0VH26_MAIZE High affinity nitrate transporter OS=Zea ... 59 1e-07 tr|Q7XK12|Q7XK12_ORYSJ Os04g0480200 protein OS=Oryza sativa subs... 55 1e-06 tr|Q01K42|Q01K42_ORYSA OSIGBa0158F13.5 protein OS=Oryza sativa G... 55 1e-06 tr|A3AUW8|A3AUW8_ORYSJ Putative uncharacterized protein OS=Oryza... 55 1e-06 tr|A2XUP7|A2XUP7_ORYSI Putative uncharacterized protein OS=Oryza... 55 2e-06 tr|Q0VH25|Q0VH25_MAIZE High affinity nitrate transporter OS=Zea ... 52 1e-05 tr|B6SZ04|B6SZ04_MAIZE Component of high affinity nitrate transp... 52 1e-05 tr|Q2JUF3|Q2JUF3_SYNJA Membrane protein/conserved domain protein... 34 3.1
>tr|A7PCQ4|A7PCQ4_VITVI Chromosome chr17 scaffold_12, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015965001 PE=4 SV=1 Length = 201
Score = 85.5 bits (210), Expect = 1e-15 Identities = 41/64 (64%), Positives = 52/64 (81%) Frame = +3
Query: 6 YFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFGF 185 YF+RAY D+ ++V YGQ+++A KT+NLF IE I+GRHAS+DIAA FSAFSVVSL GF Sbjct: 130 YFIRAYAYDAEDQEVAYGQTTDAHKTTNLFGIEAITGRHASLDIAAVCFSAFSVVSLCGF 189
Query: 186 FFYE 197 F+ E Sbjct: 190 FWVE 193
>tr|A5CB21|A5CB21_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021663 PE=4 SV=1 Length = 201
Score = 85.1 bits (209), Expect = 2e-15 Identities = 40/64 (62%), Positives = 52/64 (81%) Frame = +3
Query: 6 YFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFGF 185 YF+RAY D+ ++V YGQ+++A KT+NLF IE I+GRHAS+DIAA FSAFSV+SL GF Sbjct: 130 YFIRAYAYDAEDQEVAYGQTTDAHKTTNLFGIEAITGRHASLDIAAVCFSAFSVISLCGF 189
Query: 186 FFYE 197 F+ E Sbjct: 190 FWVE 193
>tr|Q8S343|Q8S343_CAPAN Putative uncharacterized protein upa10 OS=Capsicum annuum GN=upa10 PE=2 SV=1 Length = 202
Score = 82.8 bits (203), Expect = 8e-15 Identities = 37/64 (57%), Positives = 53/64 (82%) Frame = +3
Query: 6 YFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFGF 185 +FVRAY+L+ G ++ YGQ+++ +K +NLF I+ ISGRHA++DI + VFSAF+VVSLFGF Sbjct: 131 FFVRAYILNGDGHEIGYGQNTDDKKVNNLFDIQAISGRHATLDICSVVFSAFAVVSLFGF 190
Query: 186 FFYE 197 F+ E Sbjct: 191 FYME 194
>tr|Q4LEX1|Q4LEX1_PHYPA Putative component of high affinity nitrate transporter OS=Physcomitrella patens GN=Nar2;3 PE=2 SV=1 Length = 209
Score = 79.0 bits (193), Expect = 1e-13 Identities = 40/65 (61%), Positives = 48/65 (73%) Frame = +3
Query: 3 QYFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFG 182 +YFVRAYV +S+ ++ YGQSS K +N FT+ PISGRH SID A GVFS FSV SLF Sbjct: 136 KYFVRAYVFNSSDLQIAYGQSS-PNKINNTFTVIPISGRHGSIDAAVGVFSIFSVGSLFA 194
Query: 183 FFFYE 197 FF +E Sbjct: 195 FFIFE 199
>tr|A9SPC3|A9SPC3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165983 PE=4 SV=1 Length = 209
Score = 79.0 bits (193), Expect = 1e-13 Identities = 40/65 (61%), Positives = 48/65 (73%) Frame = +3
Query: 3 QYFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFG 182 +YFVRAYV +S+ ++ YGQSS K +N FT+ PISGRH SID A GVFS FSV SLF Sbjct: 136 KYFVRAYVFNSSDLQIAYGQSS-PNKINNTFTVIPISGRHGSIDAAVGVFSIFSVGSLFA 194
Query: 183 FFFYE 197 FF +E Sbjct: 195 FFIFE 199
>tr|Q4LEX3|Q4LEX3_PHYPA Putative component of high affinity nitrate transporter OS=Physcomitrella patens GN=Nar2;1 PE=2 SV=1 Length = 206
Score = 78.2 bits (191), Expect = 2e-13 Identities = 41/65 (63%), Positives = 48/65 (73%) Frame = +3
Query: 3 QYFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFG 182 +YFVRAY +++ G +V GQSS K +N FT+ PISGRHASIDIA GV S FSV SLFG Sbjct: 133 KYFVRAYAVNADGVQVATGQSS-PNKVANTFTVIPISGRHASIDIAVGVLSVFSVGSLFG 191
Query: 183 FFFYE 197 FF E Sbjct: 192 FFILE 196
>tr|A9SXC2|A9SXC2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_216690 PE=4 SV=1 Length = 206
Score = 78.2 bits (191), Expect = 2e-13 Identities = 41/65 (63%), Positives = 48/65 (73%) Frame = +3
Query: 3 QYFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFG 182 +YFVRAY +++ G +V GQSS K +N FT+ PISGRHASIDIA GV S FSV SLFG Sbjct: 133 KYFVRAYAVNADGVQVATGQSS-PNKVANTFTVIPISGRHASIDIAVGVLSVFSVGSLFG 191
Query: 183 FFFYE 197 FF E Sbjct: 192 FFILE 196
>tr|Q9FGS5|Q9FGS5_ARATH Genomic DNA, chromosome 5, TAC clone:K6A12 (Putative component of high affinity nitrate transporter) OS=Arabidopsis thaliana GN=nar2.1 PE=2 SV=1 Length = 210
Score = 77.0 bits (188), Expect = 4e-13 Identities = 37/64 (57%), Positives = 49/64 (76%) Frame = +3
Query: 6 YFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFGF 185 YFVRAY +D+ G +V YGQS++ K +NLF+++ ISGRHAS+DIA+ FS FSVV+L F Sbjct: 137 YFVRAYAVDAIGHEVAYGQSTDDAKKTNLFSVQAISGRHASLDIASICFSVFSVVALVVF 196
Query: 186 FFYE 197 F E Sbjct: 197 FVNE 200
>tr|Q9ARM2|Q9ARM2_ARATH Putative component of high affinity nitrate transporter OS=Arabidopsis thaliana GN=nar2.2 PE=2 SV=1 Length = 210
Score = 77.0 bits (188), Expect = 4e-13 Identities = 37/64 (57%), Positives = 49/64 (76%) Frame = +3
Query: 6 YFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFGF 185 YFVRAY +D+ G +V YGQS++ K +NLF+++ ISGRHAS+DIA+ FS FSVV+L F Sbjct: 137 YFVRAYAVDAIGHEVAYGQSTDDAKKTNLFSVQAISGRHASLDIASICFSVFSVVALVVF 196
Query: 186 FFYE 197 F E Sbjct: 197 FVNE 200
>tr|Q8LE73|Q8LE73_ARATH Putative component of high affinity nitrate transporter OS=Arabidopsis thaliana PE=2 SV=1 Length = 210
Score = 77.0 bits (188), Expect = 4e-13 Identities = 37/64 (57%), Positives = 49/64 (76%) Frame = +3
Query: 6 YFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFGF 185 YFVRAY +D+ G +V YGQS++ K +NLF+++ ISGRHAS+DIA+ FS FSVV+L F Sbjct: 137 YFVRAYAVDAIGHEVAYGQSTDDAKKTNLFSVQAISGRHASLDIASICFSVFSVVALVVF 196
Query: 186 FFYE 197 F E Sbjct: 197 FVNE 200
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