DK945613
Clone id YMU02A01NGRL0009_O08
Library
Length 261
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_O08. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAAAGAAAAGTGAAAAAAAAAATGGAAAAGGGCAAGAAGGCCTTGTGAAAATATTACGAT
TTTTGATCTCGCACGACAAATTCTGATAAAATGACTTATCAACAATCTGGTAATCTCATA
TTCAAGAGAACTATACCAACTCCTGGAATATAGAAATAGGAATGAGGGACCTAAAAGTGG
TTTGGGTAGCTTAGTGGGAACAGATATGACAATTGCCATTGGAAAATCTTCCAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945613|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_O08, 5'
(232 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id B2EI57
Definition tr|B2EI57|B2EI57_9BACT NHL repeat containing protein OS=bacterium Ellin514
Align length 47
Score (bit) 37.0
E-value 0.49
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945613|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_O08, 5'
(232 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B2EI57|B2EI57_9BACT NHL repeat containing protein OS=bacteriu... 37 0.49

>tr|B2EI57|B2EI57_9BACT NHL repeat containing protein OS=bacterium
Ellin514 GN=CflavDRAFT_2021 PE=3 SV=1
Length = 791

Score = 37.0 bits (84), Expect = 0.49
Identities = 15/47 (31%), Positives = 31/47 (65%)
Frame = -2

Query: 222 PMAIVISVPTKLPKPLLGPSFLFLYSRSWYSSLEYEITRLLISHFIR 82
P+ +V+ +P +P LLG +F+FL++R W S+ + +++++ IR
Sbjct: 294 PVGLVLWLPFLVPGVLLGIAFIFLFNRPWLSAFYQSVGIVILAYCIR 340