DK945618 |
Clone id |
YMU02A01NGRL0009_O14 |
Library |
YMU02 |
Length |
556 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_O14. 5' end sequence. |
Accession |
DK945618 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL30Contig1 |
Sequence |
GTGTTAGGGAACATGGTATGGGAGCTATTTGCAATGGCATTGCACTCCATGGAAGTGGAC TGATTCCATATTGTGCCACATTCTTTGTGTTCACTGACTACATGCGAGGTGCCATGCGAA TTTCTGCTCTTTCTGAGGCCGGAGTGATCTATGTTATGACACATGACTCTATCGGTTTGG GAGAAGATGGTCCAACCCATCAACCCATAGAGCATCTGGCAAGCTTCAGAGCCATGCCCA ATATTTTGATGTTGCGACCTGCTGATGGAAATGAGACTGCTGGTGCATACAAGGTGGCTG TGGAGAGTAGAAAACGGCCCTCAATTCTTGCGCTCTCGCGCCAAAAGCTCCCCCATCTAC CTGGGACATCTATTGAAGGAGTAGAGAAAGGAGGCTATACCATCAGTTGCAACGCTTCTG GAAACAAGCCTGACTTGATCCTCTTCGGAACAGGATCTGAACTAGAGATTGCCTACNAAG CAGCCGAAGTCATCAGGAAGGAGGGCAAAACTGTGAGAGTTGTCTCAATGGTATCATGGG AGTTGTTTGAAGAACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7SIC9 |
Definition |
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays |
Align length |
184 |
Score (bit) |
335.0 |
E-value |
1.0e-91 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945618|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0009_O14, 5' (556 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 335 1e-91 sp|Q42676|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=... 325 9e-89 sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 319 5e-87 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 317 2e-86 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 292 7e-79 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 291 1e-78 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 246 4e-65 sp|O94039|TKT1_CANAL Transketolase 1 OS=Candida albicans GN=TKT1... 193 5e-49 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 191 3e-48 sp|Q12630|TKT1_KLULA Transketolase OS=Kluyveromyces lactis GN=TK... 190 3e-48 sp|P23254|TKT1_YEAST Transketolase 1 OS=Saccharomyces cerevisiae... 189 8e-48 sp|P34736|TKT_PICST Transketolase OS=Pichia stipitis GN=TKT PE=3... 188 1e-47 sp|P56900|TKT_SINMW Transketolase OS=Sinorhizobium medicae (stra... 187 2e-47 sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (stra... 185 1e-46 sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (stra... 185 1e-46 sp|Q6GH64|TKT_STAAR Transketolase OS=Staphylococcus aureus (stra... 185 1e-46 sp|P99161|TKT_STAAN Transketolase OS=Staphylococcus aureus (stra... 185 1e-46 sp|P66962|TKT_STAAM Transketolase OS=Staphylococcus aureus (stra... 185 1e-46 sp|Q5HG77|TKT_STAAC Transketolase OS=Staphylococcus aureus (stra... 185 1e-46 sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE... 184 2e-46 sp|Q9URM2|TKT_SCHPO Probable transketolase OS=Schizosaccharomyce... 183 4e-46 sp|P58333|TKT_RHIME Transketolase OS=Rhizobium meliloti GN=cbbT ... 183 4e-46 sp|O67642|TKT_AQUAE Transketolase OS=Aquifex aeolicus GN=tkt PE=... 179 6e-45 sp|P51010|TKT_XANFL Transketolase OS=Xanthobacter flavus GN=cbbT... 179 8e-45 sp|P22976|TKT_STRPN Probable transketolase OS=Streptococcus pneu... 179 8e-45 sp|Q8D6H8|TKT2_VIBVU Transketolase 2 OS=Vibrio vulnificus GN=tkt... 178 2e-44 sp|Q7MHK7|TKT1_VIBVY Transketolase 1 OS=Vibrio vulnificus (strai... 178 2e-44 sp|Q8DCA2|TKT1_VIBVU Transketolase 1 OS=Vibrio vulnificus GN=tkt... 178 2e-44 sp|P33315|TKT2_YEAST Transketolase 2 OS=Saccharomyces cerevisiae... 177 3e-44 sp|Q87GY4|TKT2_VIBPA Transketolase 2 OS=Vibrio parahaemolyticus ... 177 3e-44
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 335 bits (858), Expect = 1e-91 Identities = 165/184 (89%), Positives = 173/184 (94%) Frame = +3
Query: 3 VREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLG 182 VREHGMGAICNGIALH G +PYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLG Sbjct: 421 VREHGMGAICNGIALHSPGFVPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLG 480
Query: 183 EDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHLP 362 EDGPTHQPIEHL SFRAMPNILMLRPADGNETAGAYKVAV +RKRPSILALSRQKLPHLP Sbjct: 481 EDGPTHQPIEHLVSFRAMPNILMLRPADGNETAGAYKVAVLNRKRPSILALSRQKLPHLP 540
Query: 363 GTSIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYXAAEVIRKEGKTVRVVSMVSWE 542 GTSIEGVEKGGYTIS N++GNKPDLI+ GTGSELEIA AA+ +RKEGKTVRVVS VSWE Sbjct: 541 GTSIEGVEKGGYTISDNSTGNKPDLIVMGTGSELEIAAKAADELRKEGKTVRVVSFVSWE 600
Query: 543 LFEE 554 LF+E Sbjct: 601 LFDE 604
>sp|Q42676|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=Craterostigma plantagineum GN=TKT3 PE=1 SV=1 Length = 519
Score = 325 bits (833), Expect = 9e-89 Identities = 162/184 (88%), Positives = 169/184 (91%) Frame = +3
Query: 3 VREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLG 182 VREHGMGAICNGIALH GLIPYCATFFVFTDYMR AMRISAL EA VIYVMTHDSIGLG Sbjct: 264 VREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAMRISALCEARVIYVMTHDSIGLG 323
Query: 183 EDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHLP 362 EDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAV++ KRPS+LALSRQKLP LP Sbjct: 324 EDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVQNLKRPSVLALSRQKLPQLP 383
Query: 363 GTSIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYXAAEVIRKEGKTVRVVSMVSWE 542 GTSIEGVEKGGY IS N+SGNKPD+IL GTGSELEIA A EV+RKEGK VRVVS VSWE Sbjct: 384 GTSIEGVEKGGYVISDNSSGNKPDVILIGTGSELEIAAKAGEVLRKEGKGVRVVSFVSWE 443
Query: 543 LFEE 554 LF+E Sbjct: 444 LFDE 447
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 319 bits (818), Expect = 5e-87 Identities = 159/184 (86%), Positives = 166/184 (90%) Frame = +3
Query: 3 VREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLG 182 VREHGMGAICNGIALH GLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLG Sbjct: 486 VREHGMGAICNGIALHSLGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLG 545
Query: 183 EDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHLP 362 EDGPTHQPIEHLASFRAMPNILM RPADGNETAGAYKVAV RK PSILALSRQKLP L Sbjct: 546 EDGPTHQPIEHLASFRAMPNILMFRPADGNETAGAYKVAVLKRKTPSILALSRQKLPQLA 605
Query: 363 GTSIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYXAAEVIRKEGKTVRVVSMVSWE 542 GTSIEG KGGY +S N+SGNKPD+IL GTGSELEIA AAE ++KEGKTVRVVS V WE Sbjct: 606 GTSIEGAAKGGYIVSDNSSGNKPDVILIGTGSELEIAVKAAEELKKEGKTVRVVSFVCWE 665
Query: 543 LFEE 554 L++E Sbjct: 666 LYDE 669
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 317 bits (812), Expect = 2e-86 Identities = 156/184 (84%), Positives = 168/184 (91%) Frame = +3
Query: 3 VREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLG 182 VREHGMGAICNGI LH G +PYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLG Sbjct: 486 VREHGMGAICNGICLHSPGFVPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLG 545
Query: 183 EDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHLP 362 EDGPTHQPIE L+ F AMPNILMLRPADGNETAG+YKVAVE+RK PSILALSR+KLP+LP Sbjct: 546 EDGPTHQPIEALSKFPAMPNILMLRPADGNETAGSYKVAVENRKTPSILALSRKKLPNLP 605
Query: 363 GTSIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYXAAEVIRKEGKTVRVVSMVSWE 542 GTSIEGVEKGGYTI+ N+SGNKPD+IL GTGSELEIA A + +RKEGK VRVVS VSWE Sbjct: 606 GTSIEGVEKGGYTITDNSSGNKPDVILIGTGSELEIAAKAGDELRKEGKAVRVVSFVSWE 665
Query: 543 LFEE 554 LFE+ Sbjct: 666 LFEK 669
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 292 bits (748), Expect = 7e-79 Identities = 143/184 (77%), Positives = 163/184 (88%), Gaps = 1/184 (0%) Frame = +3
Query: 6 REHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGE 185 REHGMGAICNG+ALH GL+P+ AT+FVFTDYMR A+RI+ALS+A V+Y+MTHDSIGLGE Sbjct: 424 REHGMGAICNGVALHSPGLVPFSATYFVFTDYMRAAIRIAALSKARVVYIMTHDSIGLGE 483
Query: 186 DGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHLPG 365 DGPTHQP+EHLASFRAMPNIL+LRPADGNETAGAYKVAVE+ RPSIL+LSRQKLP LPG Sbjct: 484 DGPTHQPVEHLASFRAMPNILVLRPADGNETAGAYKVAVENAGRPSILSLSRQKLPQLPG 543
Query: 366 TSIEGVEKGGYTISCNA-SGNKPDLILFGTGSELEIAYXAAEVIRKEGKTVRVVSMVSWE 542 TS+EGV +GGY IS N+ G KP++IL GTGSELEIA A E +RKEGK VRVVS+VSWE Sbjct: 544 TSVEGVGRGGYVISDNSKDGEKPEVILMGTGSELEIAARAGEELRKEGKKVRVVSLVSWE 603
Query: 543 LFEE 554 LF E Sbjct: 604 LFGE 607
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 291 bits (745), Expect = 1e-78 Identities = 142/185 (76%), Positives = 161/185 (87%), Gaps = 2/185 (1%) Frame = +3
Query: 6 REHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGE 185 REH MG+ICNG+ALH GL+PYCAT+FVFTDYMR AMRISALS+A V+Y+MTHDSIGLGE Sbjct: 420 REHAMGSICNGLALHSPGLLPYCATYFVFTDYMRAAMRISALSKARVLYIMTHDSIGLGE 479
Query: 186 DGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHLPG 365 DGPTHQP+EHLASFRAMPNIL LRPADGNETAGAY+ AV++ +RPSIL L+RQKLP LPG Sbjct: 480 DGPTHQPVEHLASFRAMPNILTLRPADGNETAGAYRAAVQNGERPSILVLARQKLPQLPG 539
Query: 366 TSIEGVEKGGYTISCNASG--NKPDLILFGTGSELEIAYXAAEVIRKEGKTVRVVSMVSW 539 TSIEGV KGGY IS N+ G +KPD+IL GTGSELEIA A + +RKEGK VRVVS+V W Sbjct: 540 TSIEGVSKGGYVISDNSRGGNSKPDVILIGTGSELEIAARAGDELRKEGKKVRVVSLVCW 599
Query: 540 ELFEE 554 ELF E Sbjct: 600 ELFAE 604
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 246 bits (629), Expect = 4e-65 Identities = 122/185 (65%), Positives = 149/185 (80%), Gaps = 2/185 (1%) Frame = +3
Query: 3 VREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLG 182 VREHGMGAICNGIALHGSGLIPY ATF +F+DYMR +R+SALS+AG I+VMTHDSIG G Sbjct: 414 VREHGMGAICNGIALHGSGLIPYGATFLIFSDYMRAPIRLSALSQAGSIWVMTHDSIGQG 473
Query: 183 EDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKR--PSILALSRQKLPH 356 EDGPTHQPIE LAS RA+PN+ ++RPADGNET+GAYKVA+E K P++LA +RQ +P+ Sbjct: 474 EDGPTHQPIETLASLRAIPNLTVIRPADGNETSGAYKVAIERAKNNAPTLLAFTRQNVPN 533
Query: 357 LPGTSIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYXAAEVIRKEGKTVRVVSMVS 536 L GTSI+ V KGGY + + PDLIL GTGSEL + AAE ++ EGK VRVVS+ + Sbjct: 534 LAGTSIDDVAKGGYIVV--DTDGTPDLILIGTGSELSLCVTAAEKLKAEGKKVRVVSLAA 591
Query: 537 WELFE 551 W+LF+ Sbjct: 592 WDLFD 596
>sp|O94039|TKT1_CANAL Transketolase 1 OS=Candida albicans GN=TKT1 PE=3 SV=1 Length = 677
Score = 193 bits (490), Expect = 5e-49 Identities = 99/184 (53%), Positives = 126/184 (68%) Frame = +3
Query: 3 VREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLG 182 VREHGMGAI NGIA G+ Y TF F Y GA+R+SALS VI+V THDSIGLG Sbjct: 413 VREHGMGAIMNGIAAFGANYKNYGGTFLNFVSYAAGALRLSALSHHPVIWVATHDSIGLG 472
Query: 183 EDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHLP 362 EDGPTHQPIE LA FRA+PN+ + RPADGNE + AY A+ES PS++AL+RQ LP L Sbjct: 473 EDGPTHQPIETLAHFRAIPNLSVWRPADGNEVSAAYAAAIESTSHPSVIALTRQNLPQLE 532
Query: 363 GTSIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYXAAEVIRKEGKTVRVVSMVSWE 542 G+SIE KGGYT+ + PD+I+ +GSE+ I+ A+E + K+G VVS+ + Sbjct: 533 GSSIENALKGGYTL---VKKDNPDVIIVSSGSEVSISVAASEELAKQGVKANVVSLPDFF 589
Query: 543 LFEE 554 F++ Sbjct: 590 TFDQ 593
>sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1 Length = 666
Score = 191 bits (484), Expect = 3e-48 Identities = 99/186 (53%), Positives = 131/186 (70%), Gaps = 3/186 (1%) Frame = +3
Query: 3 VREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLG 182 VRE MGA NG+ALHG GL + ATFFVF+DY+R A+R++AL + VIYV THDSI +G Sbjct: 408 VREFAMGAAMNGMALHG-GLKVFGATFFVFSDYLRPAIRLAALMQLPVIYVFTHDSIAVG 466
Query: 183 EDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHLP 362 EDGPTH+P+E LAS RAMP + ++RPADGNE+ A+K+A+ES+ +P+ L LSRQ LP L Sbjct: 467 EDGPTHEPVEQLASLRAMPGLSVIRPADGNESVAAWKLALESKDQPTALVLSRQNLPTLE 526
Query: 363 GT---SIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYXAAEVIRKEGKTVRVVSMV 533 G + +GV KG Y ++ + DL+L +GSE+ +A A E + KEG VVSM Sbjct: 527 GAVDRAYDGVSKGAYVLA--PANGSADLLLLASGSEVSLAVNAKEALEKEGIHAAVVSMP 584
Query: 534 SWELFE 551 SW+ FE Sbjct: 585 SWDRFE 590
>sp|Q12630|TKT1_KLULA Transketolase OS=Kluyveromyces lactis GN=TKL1 PE=3 SV=1 Length = 679
Score = 190 bits (483), Expect = 3e-48 Identities = 99/182 (54%), Positives = 126/182 (69%) Frame = +3
Query: 3 VREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLG 182 VREHGMGAI NGI+ G+ PY TF F Y GA+R+SALS VI+V THDSIGLG Sbjct: 415 VREHGMGAIMNGISAFGANYRPYGGTFLNFVSYASGAVRLSALSGHPVIWVATHDSIGLG 474
Query: 183 EDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHLP 362 EDGPTHQPIE LA FRA+PN+ + RPADGNE AYKVA+ ++ P+I+ALSRQ LP L Sbjct: 475 EDGPTHQPIETLAHFRAIPNLQVWRPADGNEVTAAYKVALTNKHTPAIIALSRQNLPQLQ 534
Query: 363 GTSIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYXAAEVIRKEGKTVRVVSMVSWE 542 G+S+E KGGY + ++PDL + TGSE+ IA AA+V+ ++ R+VS+ + Sbjct: 535 GSSVEKAVKGGYILQ---DVDQPDLAIVSTGSEVGIAVEAAKVLAEKNIKARIVSLPDFH 591
Query: 543 LF 548 F Sbjct: 592 SF 593
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B7ZYI1 |
Definition |
tr|B7ZYI1|B7ZYI1_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
184 |
Score (bit) |
334.0 |
E-value |
2.0e-90 |
Report |
|