DK945624
Clone id YMU02A01NGRL0009_O21
Library
Length 163
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_O21. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GGCTTACCTACTAAATATCTGACGTGGCAGAAGGGATCTCCCAGAGACAAGAAGGGATGA
TATATTGGAACGACAAGCAGGAAGGAGAAAGAATTGGGCAAAAATGATGAATAGAATAAA
TTGAAAGAAAAGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945624|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_O21, 5'
(116 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q53N99
Definition tr|Q53N99|Q53N99_ORYSJ Os11g0245200 protein OS=Oryza sativa subsp. japonica
Align length 28
Score (bit) 33.1
E-value 7.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945624|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_O21, 5'
(116 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q53N99|Q53N99_ORYSJ Os11g0245200 protein OS=Oryza sativa subs... 33 7.2
tr|B8BJW1|B8BJW1_ORYSI Putative uncharacterized protein OS=Oryza... 33 7.2
tr|A3CA56|A3CA56_ORYSJ Putative uncharacterized protein OS=Oryza... 33 7.2

>tr|Q53N99|Q53N99_ORYSJ Os11g0245200 protein OS=Oryza sativa subsp.
japonica GN=Os11g0245200 PE=4 SV=1
Length = 897

Score = 33.1 bits (74), Expect = 7.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2

Query: 115 SIHHFCPILSPSCLSFQYIIPSCLWEIP 32
S CP L P+CLS QY+ P+C +P
Sbjct: 353 STQSICPGLPPTCLSDQYLSPNCTCAVP 380


>tr|B8BJW1|B8BJW1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_35675 PE=4 SV=1
Length = 954

Score = 33.1 bits (74), Expect = 7.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2

Query: 115 SIHHFCPILSPSCLSFQYIIPSCLWEIP 32
S CP L P+CLS QY+ P+C +P
Sbjct: 428 STQSICPGLPPTCLSDQYLSPNCTCAVP 455


>tr|A3CA56|A3CA56_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_032178 PE=4 SV=1
Length = 893

Score = 33.1 bits (74), Expect = 7.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2

Query: 115 SIHHFCPILSPSCLSFQYIIPSCLWEIP 32
S CP L P+CLS QY+ P+C +P
Sbjct: 353 STQSICPGLPPTCLSDQYLSPNCTCAVP 380