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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945632
Clone id YMU02A01NGRL0009_P08
Library
Length 133
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_P08. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
TCCCTTCGGGGACATCTGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGC
GCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTTTCAAAAAAAAAAAAAAAA
AAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q8SUR9
Definition sp|Q8SUR9|Z856_ENCCU Zinc finger C2H2 protein ECU08_0560 OS=Encephalitozoon cuniculi
Align length 16
Score (bit) 29.3
E-value 6.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945632|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_P08, 5'
         (104 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8SUR9|Z856_ENCCU Zinc finger C2H2 protein ECU08_0560 OS=Ence...    29   6.5  

>sp|Q8SUR9|Z856_ENCCU Zinc finger C2H2 protein ECU08_0560
           OS=Encephalitozoon cuniculi GN=ECU08_0560 PE=4 SV=1
          Length = 449

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = -3

Query: 72  CHPCAGAMLIFSVSFQ 25
           C P AGAMLIFSV FQ
Sbjct: 67  CRPYAGAMLIFSVLFQ 82
tr_hit_id A9U898
Definition tr|A9U898|A9U898_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 33
Score (bit) 68.9
E-value 1.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945632|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_P08, 5'
         (104 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9U898|A9U898_PHYPA Predicted protein OS=Physcomitrella paten...    69   1e-10
tr|A5AGR5|A5AGR5_VITVI Putative uncharacterized protein OS=Vitis...    69   2e-10
tr|A2Q271|A2Q271_MEDTR Putative uncharacterized protein OS=Medic...    58   2e-07
tr|Q4XSX0|Q4XSX0_PLACH Putative uncharacterized protein OS=Plasm...    47   4e-04
tr|Q4X7X8|Q4X7X8_PLACH Putative uncharacterized protein OS=Plasm...    45   0.001
tr|A7RME5|A7RME5_NEMVE Predicted protein OS=Nematostella vectens...    42   0.012
tr|Q7RPR4|Q7RPR4_PLAYO Putative uncharacterized protein PY01392 ...    42   0.020
tr|A9SFI4|A9SFI4_PHYPA Predicted protein OS=Physcomitrella paten...    40   0.059
tr|B0DEX0|B0DEX0_LACBS Predicted protein OS=Laccaria bicolor (st...    37   0.50 

>tr|A9U898|A9U898_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_104293 PE=4 SV=1
          Length = 202

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = +3

Query: 6   SGTSDKIGTIQRRLAWPLRKDDTHKSRNGPNFF 104
           S TSDKIGTIQRRLAWPLRKDDTHKSRNGP+FF
Sbjct: 88  SETSDKIGTIQRRLAWPLRKDDTHKSRNGPDFF 120


>tr|A5AGR5|A5AGR5_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_016436 PE=4 SV=1
          Length = 377

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 32/33 (96%), Positives = 32/33 (96%)
 Frame = -2

Query: 103 KKFGPFLDLCVSSLRRGHANLLCIVPILSDVPE 5
           KKFGPFLDLCVSSLRRGHANLLCIVPILSDV E
Sbjct: 32  KKFGPFLDLCVSSLRRGHANLLCIVPILSDVSE 64



 Score = 67.0 bits (162), Expect = 5e-10
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = -2

Query: 103 KKFGPFLDLCVSSLRRGHANLLCIVPILSDV 11
           KKFGPFLDLCVSSLRRGHANLLCIVPILSDV
Sbjct: 131 KKFGPFLDLCVSSLRRGHANLLCIVPILSDV 161



 Score = 67.0 bits (162), Expect = 5e-10
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = -2

Query: 103 KKFGPFLDLCVSSLRRGHANLLCIVPILSDV 11
           KKFGPFLDLCVSSLRRGHANLLCIVPILSDV
Sbjct: 230 KKFGPFLDLCVSSLRRGHANLLCIVPILSDV 260


>tr|A2Q271|A2Q271_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula GN=MtrDRAFT_AC149489g27v2 PE=4 SV=1
          Length = 69

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 26/32 (81%), Positives = 27/32 (84%)
 Frame = +3

Query: 3   PSGTSDKIGTIQRRLAWPLRKDDTHKSRNGPN 98
           PSGTSDKI TI RRL W L KDDTH+SRNGPN
Sbjct: 22  PSGTSDKIKTIHRRLTWLLHKDDTHQSRNGPN 53


>tr|Q4XSX0|Q4XSX0_PLACH Putative uncharacterized protein
          OS=Plasmodium chabaudi GN=PC106729.00.0 PE=4 SV=1
          Length = 44

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = -3

Query: 72 CHPCAGAMLIFSVSFQFYQMSPKG 1
          CHPCAGAMLIFSVSFQFYQ +  G
Sbjct: 2  CHPCAGAMLIFSVSFQFYQTASPG 25


>tr|Q4X7X8|Q4X7X8_PLACH Putative uncharacterized protein
           OS=Plasmodium chabaudi GN=PC405219.00.0 PE=4 SV=1
          Length = 62

 Score = 45.4 bits (106), Expect = 0.001
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = -2

Query: 103 KKFGPFLDLCVSSLRRGHANLLCIVPILSD 14
           KKF   L+  VSSLRRGHANLLCIVPILS+
Sbjct: 26  KKFTFLLERHVSSLRRGHANLLCIVPILSN 55


>tr|A7RME5|A7RME5_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g239358 PE=4 SV=1
          Length = 404

 Score = 42.4 bits (98), Expect = 0.012
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = +3

Query: 12  TSDKIGTIQRRLAWPLRKDDT 74
           T  KIGTIQRRLAWPLRKDDT
Sbjct: 206 TYTKIGTIQRRLAWPLRKDDT 226


>tr|Q7RPR4|Q7RPR4_PLAYO Putative uncharacterized protein PY01392
          OS=Plasmodium yoelii yoelii GN=PY01392 PE=4 SV=1
          Length = 37

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +3

Query: 21 KIGTIQRRLAWPLRKDDT 74
          KIGTIQRRLAWPLRKDDT
Sbjct: 20 KIGTIQRRLAWPLRKDDT 37


>tr|A9SFI4|A9SFI4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_78653 PE=4 SV=1
          Length = 123

 Score = 40.0 bits (92), Expect = 0.059
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = -2

Query: 61  RRGHANLLCIVPILSDVPE 5
           RRGHANLLCIVPILSDV E
Sbjct: 54  RRGHANLLCIVPILSDVSE 72


>tr|B0DEX0|B0DEX0_LACBS Predicted protein OS=Laccaria bicolor
          (strain S238N-H82) GN=LACBIDRAFT_299582 PE=4 SV=1
          Length = 77

 Score = 37.0 bits (84), Expect = 0.50
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +3

Query: 27 GTIQRRLAWPLRKDDTHKSRNG 92
          GTIQRRLAWPL KDDT  SR+G
Sbjct: 19 GTIQRRLAWPLHKDDT-LSRSG 39