DK945635
Clone id YMU02A01NGRL0009_P12
Library
Length 163
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_P12. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
CCTGGGCTTACGCCACCAACTTCACCCCCGGAAAGTGAAACGGAGCTGTCCTGGCTGTTC
AATTGTGGCTATGGCCTTCGTCTTAAGTGGTTAAACGAATGTTGTGTAACTCATTGAGCT
TTTTTGGCAATGTAAAGTTAAGAAATACTTTTCTCTTCCAAAA
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 11
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945635|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_P12, 5'
(147 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 30 3.7

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
SV=1
Length = 265

Score = 30.0 bits (66), Expect = 3.7
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3

Query: 3 WAYATNFTPGK 35
WAYATNFTPGK
Sbjct: 255 WAYATNFTPGK 265


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945635|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_P12, 5'
(147 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******