NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945681
Clone id YMU02A01NGRL0010_B16
Library
Length 585
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_B16. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GTATCTCACGGGACTCCACGCACAAGAGGCGGGCAACTGGAGGCAAGAAGAAGACATGGC
GCAAGAAAAGGAAATACGAGTTGGGTCGTCAACCAGGCATGACTAAGCTGTCCAGTAACA
AGACTGTAAGGAAGATCCGCGTGCGGGGAGGCAATTTCAAGTTTCGTGCTCTGCGCCTTG
ATACTGGCAACTACTCATGGGGATCAGAGGCAACGACCAGGAAGACCCGTATCTTAGATG
TTGTCTACAATGCATCCAATAATGAGCTTGTTAGGACGCAGACGCTCGTGAAGTCTGCCA
TTGTTCAGGTGGATGCTGCACCTTTCCGCCAGCGGTATAGCCAGCACTATGGTGTGGACT
TGGGAAAGAAGAAGAGAGCTGCCAGTGCCAAGAAGGAAGCTGAGGACACGGATGCTACCG
CAGGTGACGGGGAGAAGAAGCAAAGCAAACATGTCGAGCGGAAGATATCTGCTCGTAATG
AGGATCGCAAATTGGATGCTCATCTGGAGGATCAGATTGCAAGTGGACGCCTTCTCGCTT
GCATATCATCTCGTCCTGGCCAATGTGGGCGAGCCGATGGTTATA
■■Homology search results ■■ -
sp_hit_id P49199
Definition sp|P49199|RS8_ORYSJ 40S ribosomal protein S8 OS=Oryza sativa subsp. japonica
Align length 194
Score (bit) 250.0
E-value 4.0e-66
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945681|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_B16, 5'
         (585 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P49199|RS8_ORYSJ 40S ribosomal protein S8 OS=Oryza sativa sub...   250   4e-66
sp|Q93VG5|RS81_ARATH 40S ribosomal protein S8-1 OS=Arabidopsis t...   247   4e-65
sp|Q08069|RS8_MAIZE 40S ribosomal protein S8 OS=Zea mays GN=RPS8...   243   4e-64
sp|Q9FIF3|RS82_ARATH 40S ribosomal protein S8-2 OS=Arabidopsis t...   241   1e-63
sp|O81361|RS8_PRUAR 40S ribosomal protein S8 OS=Prunus armeniaca...   233   4e-61
sp|Q90YR6|RS8_ICTPU 40S ribosomal protein S8 OS=Ictalurus puncta...   188   1e-47
sp|O76756|RS8_APIME 40S ribosomal protein S8 OS=Apis mellifera G...   188   2e-47
sp|Q8WQI5|RS8_SPOFR 40S ribosomal protein S8 OS=Spodoptera frugi...   182   8e-46
sp|P62247|RS8_DANRE 40S ribosomal protein S8 OS=Danio rerio GN=r...   182   1e-45
sp|Q9P7B2|RS8B_SCHPO 40S ribosomal protein S8-B OS=Schizosacchar...   182   1e-45
sp|O14049|RS8A_SCHPO 40S ribosomal protein S8-A OS=Schizosacchar...   181   2e-45
sp|P62243|RS8_RAT 40S ribosomal protein S8 OS=Rattus norvegicus ...   181   2e-45
sp|P62242|RS8_MOUSE 40S ribosomal protein S8 OS=Mus musculus GN=...   181   2e-45
sp|Q4R6P8|RS8_MACFA 40S ribosomal protein S8 OS=Macaca fascicula...   181   2e-45
sp|P62241|RS8_HUMAN 40S ribosomal protein S8 OS=Homo sapiens GN=...   181   2e-45
sp|Q5E958|RS8_BOVIN 40S ribosomal protein S8 OS=Bos taurus GN=RP...   181   2e-45
sp|Q8MLY8|RS8_DROME 40S ribosomal protein S8 OS=Drosophila melan...   180   4e-45
sp|Q9ZT56|RS8_GRIJA 40S ribosomal protein S8 OS=Griffithsia japo...   179   9e-45
sp|Q7SYU0|RS8_XENLA 40S ribosomal protein S8 OS=Xenopus laevis G...   174   3e-43
sp|Q4N3P0|RS8_THEPA 40S ribosomal protein S8 OS=Theileria parva ...   172   1e-42
sp|P05754|RS8_YEAST 40S ribosomal protein S8 OS=Saccharomyces ce...   171   3e-42
sp|Q54E24|RS8_DICDI 40S ribosomal protein S8 OS=Dictyostelium di...   167   5e-41
sp|P48156|RS8_CAEEL 40S ribosomal protein S8 OS=Caenorhabditis e...   165   2e-40
sp|Q4UFS9|RS8_THEAN 40S ribosomal protein S8 OS=Theileria annula...   164   2e-40
sp|P25204|RS8_LEIMA 40S ribosomal protein S8 OS=Leishmania major...   154   4e-37
sp|A3DNX9|RS8E_STAMF 30S ribosomal protein S8e OS=Staphylothermu...    59   2e-08
sp|P61301|RS8E_NANEQ 30S ribosomal protein S8e OS=Nanoarchaeum e...    55   3e-07
sp|Q6L0D3|RS8E_PICTO 30S ribosomal protein S8e OS=Picrophilus to...    54   4e-07
sp|A0B8P7|RS8E_METTP 30S ribosomal protein S8e OS=Methanosaeta t...    54   7e-07
sp|A2STM4|RS8E_METLZ 30S ribosomal protein S8e OS=Methanocorpusc...    53   1e-06

>sp|P49199|RS8_ORYSJ 40S ribosomal protein S8 OS=Oryza sativa subsp.
           japonica GN=RPS8 PE=2 SV=2
          Length = 220

 Score =  250 bits (638), Expect = 4e-66
 Identities = 130/194 (67%), Positives = 140/194 (72%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRDS H                 YELGRQP  TKLSSNKTVR++RVRGGN K+RALRLD
Sbjct: 3   ISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLD 62

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           TGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+Q Y  HYGVD+
Sbjct: 63  TGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDI 122

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G               DA A   E K+S HV RK+  R + R LDAH+E+Q  SGRLLAC
Sbjct: 123 GRKKKAPAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLLAC 182

Query: 543 ISSRPGQCGRADGY 584
           ISSRPGQCGRADGY
Sbjct: 183 ISSRPGQCGRADGY 196


>sp|Q93VG5|RS81_ARATH 40S ribosomal protein S8-1 OS=Arabidopsis
           thaliana GN=RPS8A PE=2 SV=1
          Length = 222

 Score =  247 bits (630), Expect = 4e-65
 Identities = 130/197 (65%), Positives = 144/197 (73%), Gaps = 3/197 (1%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRDS H                 YE+GRQP  TKLSSNKTVR+IRVRGGN K+RALRLD
Sbjct: 3   ISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLD 62

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           TGNYSWGSEATTRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPF+Q Y  HYGV+L
Sbjct: 63  TGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGVEL 122

Query: 363 GXXXXXXXXXXXXXDTD---ATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRL 533
           G             +     A A   E K+S H+ RKI++R E R LD+H+EDQ ASGRL
Sbjct: 123 GRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASGRL 182

Query: 534 LACISSRPGQCGRADGY 584
           LACISSRPGQCGRADGY
Sbjct: 183 LACISSRPGQCGRADGY 199


>sp|Q08069|RS8_MAIZE 40S ribosomal protein S8 OS=Zea mays GN=RPS8
           PE=2 SV=2
          Length = 221

 Score =  243 bits (621), Expect = 4e-64
 Identities = 128/195 (65%), Positives = 139/195 (71%), Gaps = 1/195 (0%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRDS H                 YELGRQP  TKLSSNKTVR++RVRGGN K+RALRLD
Sbjct: 3   ISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLD 62

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           TGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+Q Y  HYGVD+
Sbjct: 63  TGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDI 122

Query: 363 GXXXXXXXXXXXXXD-TDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLA 539
           G             +  +  A   E K+S HV RK+  R E R LD H+E+Q  SGRLLA
Sbjct: 123 GRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRLLA 182

Query: 540 CISSRPGQCGRADGY 584
           CISSRPGQCGRADGY
Sbjct: 183 CISSRPGQCGRADGY 197


>sp|Q9FIF3|RS82_ARATH 40S ribosomal protein S8-2 OS=Arabidopsis
           thaliana GN=RPS8B PE=2 SV=1
          Length = 210

 Score =  241 bits (616), Expect = 1e-63
 Identities = 128/194 (65%), Positives = 142/194 (73%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRDS H                 YELGRQP  TKLSSNKTVR+IRVRGGN K+RALRLD
Sbjct: 3   ISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLD 62

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           TGN+SWGSEA TRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPF+Q Y QHYGVD+
Sbjct: 63  TGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGVDI 122

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G               +A   + E K+S HV+RK+  R E R LD+HLE+Q +SGRLLAC
Sbjct: 123 GRKKKG----------EAVTTE-EVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLAC 171

Query: 543 ISSRPGQCGRADGY 584
           I+SRPGQCGRADGY
Sbjct: 172 IASRPGQCGRADGY 185


>sp|O81361|RS8_PRUAR 40S ribosomal protein S8 OS=Prunus armeniaca
           GN=RPS8 PE=2 SV=1
          Length = 221

 Score =  233 bits (595), Expect = 4e-61
 Identities = 122/193 (63%), Positives = 138/193 (71%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRDS H                 YELGRQP  TKLSSNKTVR+IRVRGGN K+RALRLD
Sbjct: 3   ISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLD 62

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           TGN+SWGSEA TRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPF+Q Y QHYGV++
Sbjct: 63  TGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEI 122

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G             + +  A   E K+S HV  K+  R + R LDAH+E+Q   G+LLAC
Sbjct: 123 GRKKKTAAAKKDTPE-EGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLAC 181

Query: 543 ISSRPGQCGRADG 581
           ISSRPGQCG+ADG
Sbjct: 182 ISSRPGQCGKADG 194


>sp|Q90YR6|RS8_ICTPU 40S ribosomal protein S8 OS=Ictalurus punctatus
           GN=rps8 PE=2 SV=3
          Length = 208

 Score =  188 bits (478), Expect = 1e-47
 Identities = 101/194 (52%), Positives = 122/194 (62%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRD+ H                 YELGR P  TKL   K +  +RVRGGN K+RALRLD
Sbjct: 3   ISRDNWHKRRKTGGKRKPVHKKRKYELGRPPSNTKLGP-KRIHTVRVRGGNKKYRALRLD 61

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
            GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ ++ VD+APFRQ Y  HY + L
Sbjct: 62  VGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVILVDSAPFRQWYESHYALPL 121

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G              T        KK+SK V++K   R ++ K+   L++Q   G+LLAC
Sbjct: 122 GRKKGAKL-------TPEEEDILNKKRSKKVQKKFDKRRKNSKISPLLDEQFQQGKLLAC 174

Query: 543 ISSRPGQCGRADGY 584
           ISSRPGQCGRADGY
Sbjct: 175 ISSRPGQCGRADGY 188


>sp|O76756|RS8_APIME 40S ribosomal protein S8 OS=Apis mellifera
           GN=RpS8 PE=2 SV=2
          Length = 208

 Score =  188 bits (477), Expect = 2e-47
 Identities = 104/194 (53%), Positives = 122/194 (62%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRD  H                 +ELGR    TKL   + +  +R RGGN K+RALRLD
Sbjct: 3   ISRDHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQR-IHTVRTRGGNKKYRALRLD 61

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           TGN+SWGSE TTRKTRI+DVVYNASNNELVRT+TLVK+AIV +DA PFRQ Y  HY + L
Sbjct: 62  TGNFSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYVLPL 121

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G              T+A      KK+SK  E K  AR    K++  LE+Q A+GR+LAC
Sbjct: 122 GRKRGAKL-------TEAEEEVLNKKRSKKAEAKYKARQRFAKVEPALEEQFATGRVLAC 174

Query: 543 ISSRPGQCGRADGY 584
           ISSRPGQCGR DGY
Sbjct: 175 ISSRPGQCGREDGY 188


>sp|Q8WQI5|RS8_SPOFR 40S ribosomal protein S8 OS=Spodoptera
           frugiperda GN=RpS8 PE=2 SV=1
          Length = 208

 Score =  182 bits (463), Expect = 8e-46
 Identities = 101/194 (52%), Positives = 123/194 (63%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRD  H                 YELGR    TKL   + +  +R RGGN K+RALRLD
Sbjct: 3   ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQR-IHLVRSRGGNTKYRALRLD 61

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           TGN+SWGSE +TRK+RI+DVVYNASNNELVRT+TLVK+AIV VDA PFRQ Y  HY + L
Sbjct: 62  TGNFSWGSECSTRKSRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPL 121

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G              T+A      KK+S+   +K  AR    K+++ LE+Q  +GRLLAC
Sbjct: 122 GRKKGAKL-------TEAEDAIINKKRSQKTAKKYLARQRLSKVESALEEQFHTGRLLAC 174

Query: 543 ISSRPGQCGRADGY 584
           ++SRPGQCGRADGY
Sbjct: 175 VASRPGQCGRADGY 188


>sp|P62247|RS8_DANRE 40S ribosomal protein S8 OS=Danio rerio GN=rps8
           PE=2 SV=2
          Length = 208

 Score =  182 bits (462), Expect = 1e-45
 Identities = 99/194 (51%), Positives = 120/194 (61%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRD+ H                 YELGR    TK+   + +  IRVRGGN K+RALRLD
Sbjct: 3   ISRDNWHKRRRTGGKRKPVHKKRKYELGRPAANTKIGPRR-IHTIRVRGGNKKYRALRLD 61

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
            GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ +V VD+ P+RQ Y  HY + L
Sbjct: 62  VGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVVLVDSTPYRQWYESHYALPL 121

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G              T        KK+SK V++K + R +  K+   LE+Q   G+LLAC
Sbjct: 122 GRKKGAKL-------TPEEEEILNKKRSKKVQKKFTLRRKTAKISPLLEEQFLQGKLLAC 174

Query: 543 ISSRPGQCGRADGY 584
           ISSRPGQCGRADGY
Sbjct: 175 ISSRPGQCGRADGY 188


>sp|Q9P7B2|RS8B_SCHPO 40S ribosomal protein S8-B
           OS=Schizosaccharomyces pombe GN=rps8b PE=1 SV=1
          Length = 200

 Score =  182 bits (461), Expect = 1e-45
 Identities = 102/194 (52%), Positives = 123/194 (63%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           I+RDS H                 +ELGRQP  T++   K + ++RVRGGN KFRALRLD
Sbjct: 3   ITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGP-KRIHEVRVRGGNKKFRALRLD 61

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           +GN+SWGSE  ++KTRI+ V Y+ SNNELVRT TL KSAIVQ+DAAPFR  Y  HYG+ +
Sbjct: 62  SGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILM 121

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G                ATA    K  SKHV+RK SAR  D K+D+ LE Q A+GRL A 
Sbjct: 122 G-----------SKGKKATATPTPK--SKHVQRKHSARLGDSKVDSALETQFAAGRLYAV 168

Query: 543 ISSRPGQCGRADGY 584
           +SSRPGQ GR DGY
Sbjct: 169 VSSRPGQSGRCDGY 182
tr_hit_id A9TGU7
Definition tr|A9TGU7|A9TGU7_PHYPA Ribosomal protein S8 OS=Physcomitrella patens subsp. patens
Align length 194
Score (bit) 255.0
E-value 1.0e-66
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945681|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_B16, 5'
         (585 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TGU7|A9TGU7_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...   255   1e-66
tr|A9T469|A9T469_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...   255   1e-66
tr|A9NMS2|A9NMS2_PICSI Ribosomal protein S8 OS=Picea sitchensis ...   253   6e-66
tr|A9TQV8|A9TQV8_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...   253   7e-66
tr|A9TG34|A9TG34_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...   252   1e-65
tr|A9S3Y5|A9S3Y5_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...   252   1e-65
tr|A9NMR0|A9NMR0_PICSI Ribosomal protein S8 OS=Picea sitchensis ...   251   2e-65
tr|B8LML6|B8LML6_PICSI Putative uncharacterized protein OS=Picea...   251   2e-65
tr|Q0E158|Q0E158_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs...   250   5e-65
tr|B8AHZ6|B8AHZ6_ORYSI Putative uncharacterized protein OS=Oryza...   250   5e-65
tr|A9NNT7|A9NNT7_PICSI Ribosomal protein S8 OS=Picea sitchensis ...   250   5e-65
tr|A9P8H4|A9P8H4_POPTR Ribosomal protein S8 OS=Populus trichocar...   249   8e-65
tr|A9P8D2|A9P8D2_POPTR Ribosomal protein S8 OS=Populus trichocar...   249   8e-65
tr|B3TM36|B3TM36_ELAGV 40S ribosomal protein S8 OS=Elaeis guinee...   245   1e-63
tr|Q3HRZ6|Q3HRZ6_SOLTU Ribosomal protein S8 OS=Solanum tuberosum...   245   1e-63
tr|B7FMW0|B7FMW0_MEDTR Putative uncharacterized protein OS=Medic...   245   1e-63
tr|B4FGG1|B4FGG1_MAIZE Putative uncharacterized protein OS=Zea m...   245   1e-63
tr|A2XS59|A2XS59_ORYSI Ribosomal protein S8 OS=Oryza sativa subs...   244   2e-63
tr|Q7XKS7|Q7XKS7_ORYSA Ribosomal protein S8 OS=Oryza sativa GN=O...   243   4e-63
tr|Q0JDZ7|Q0JDZ7_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs...   243   4e-63
tr|B4FE90|B4FE90_MAIZE 40S ribosomal protein S8 OS=Zea mays PE=2...   243   4e-63
tr|A5AUZ0|A5AUZ0_VITVI Ribosomal protein S8 OS=Vitis vinifera GN...   243   7e-63
tr|Q0WSK1|Q0WSK1_ARATH Ribosomal protein S8 OS=Arabidopsis thali...   241   2e-62
tr|A1YKE4|A1YKE4_BRASY Ribosomal protein S8 OS=Brachypodium sylv...   239   6e-62
tr|A3A6Z9|A3A6Z9_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs...   239   8e-62
tr|B7FGL5|B7FGL5_MEDTR Putative uncharacterized protein OS=Medic...   238   2e-61
tr|A7P0G2|A7P0G2_VITVI Ribosomal protein S8 OS=Vitis vinifera GN...   236   5e-61
tr|Q2XPV9|Q2XPV9_SOLTU Ribosomal protein S8 OS=Solanum tuberosum...   236   7e-61
tr|B6DMH1|B6DMH1_9LAMI Putative 40S ribosomal protein S8-like pr...   233   5e-60
tr|A8HVQ1|A8HVQ1_CHLRE Ribosomal protein S8 OS=Chlamydomonas rei...   219   9e-56

>tr|A9TGU7|A9TGU7_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_194964 PE=3 SV=1
          Length = 216

 Score =  255 bits (652), Expect = 1e-66
 Identities = 133/194 (68%), Positives = 146/194 (75%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRDSTH                 YELGRQ  MTKLSSNKTVR+IRVRGGNFKFRALRLD
Sbjct: 3   ISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNFKFRALRLD 62

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           TGN+SWGSEA TRKTR+LDVVYNASNNELVRTQTLVK+AI+QVDAAPFR  YSQHYGV++
Sbjct: 63  TGNFSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGVEI 122

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G             D +      E+K+SKHV RKI+ R E +KLDAHLEDQ ASGRLLAC
Sbjct: 123 G----KKKKTAAKKDAEEAEATEEEKKSKHVLRKIAKRVESQKLDAHLEDQFASGRLLAC 178

Query: 543 ISSRPGQCGRADGY 584
           I+SRPGQCGR DGY
Sbjct: 179 IASRPGQCGRVDGY 192


>tr|A9T469|A9T469_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_191463 PE=3 SV=1
          Length = 216

 Score =  255 bits (651), Expect = 1e-66
 Identities = 135/194 (69%), Positives = 146/194 (75%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRDSTH                 YELGRQ  MTKLSSNKTVR+IRVRGGN KFRALRLD
Sbjct: 3   ISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALRLD 62

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           TGN+SWGSEA TRKTRILDVVYNASNNELVRTQTLVK+AI+QVDAAPFR  YSQHYGV++
Sbjct: 63  TGNFSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGVEI 122

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G             +T     + EKKQS HV RKI+ R E +KLDAHLEDQ ASGRLLAC
Sbjct: 123 GKKKKAAVKKEEVAETT----EEEKKQSSHVLRKIAKRAEGQKLDAHLEDQFASGRLLAC 178

Query: 543 ISSRPGQCGRADGY 584
           ISSRPGQCGR+DGY
Sbjct: 179 ISSRPGQCGRSDGY 192


>tr|A9NMS2|A9NMS2_PICSI Ribosomal protein S8 OS=Picea sitchensis
           PE=2 SV=1
          Length = 221

 Score =  253 bits (646), Expect = 6e-66
 Identities = 129/194 (66%), Positives = 143/194 (73%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRDS H                 YELGRQP MTKLSSNKTVR++RVRGGN K+RALRLD
Sbjct: 3   ISRDSLHKKRATGGKKKVWRKKRKYELGRQPSMTKLSSNKTVRRVRVRGGNVKWRALRLD 62

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           TGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFRQ Y QHYG+D+
Sbjct: 63  TGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYEQHYGLDI 122

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G             +      + EKK+SKH+ +KI  R E  KLD+HLE+Q ASGRLLA 
Sbjct: 123 GRKKKAAAAKKETTEEGEATAEEEKKKSKHLLKKIEKRQEGHKLDSHLEEQFASGRLLAA 182

Query: 543 ISSRPGQCGRADGY 584
           I+SRPGQCGRADGY
Sbjct: 183 IASRPGQCGRADGY 196


>tr|A9TQV8|A9TQV8_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_110504 PE=3 SV=1
          Length = 216

 Score =  253 bits (645), Expect = 7e-66
 Identities = 133/194 (68%), Positives = 147/194 (75%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRDSTH                 YELGRQ  MTKLSSNKTVR+IRVRGGN KFRALRLD
Sbjct: 3   ISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALRLD 62

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           TGN+SWGSEA TRKTR+LDVVYNASNNELVRTQTLVK+AI+QVDAAPFR  YSQHYGV++
Sbjct: 63  TGNFSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGVEI 122

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G             D +A A + + KQS HV RKI+ R E +KLD+HLEDQ ASGRLLAC
Sbjct: 123 G----KKKKAAAKKDEEAEATEEQTKQSGHVLRKIAKRVEGQKLDSHLEDQFASGRLLAC 178

Query: 543 ISSRPGQCGRADGY 584
           I+SRPGQCGRADGY
Sbjct: 179 IASRPGQCGRADGY 192


>tr|A9TG34|A9TG34_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_194737 PE=3 SV=1
          Length = 216

 Score =  252 bits (643), Expect = 1e-65
 Identities = 131/194 (67%), Positives = 147/194 (75%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRDSTH                 YELGRQ  MTKLSSNKTVR+IRVRGGN KFRALRLD
Sbjct: 3   ISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALRLD 62

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           TGN+SWGSEA TRKTR+LDVVYNASNNELVRTQTLVK+AI+QVDAAPFR  YSQHYGV++
Sbjct: 63  TGNFSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGVEI 122

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G             DT+      E+K+S HV+RK++ R E +KLD+HLEDQ ASGRLLAC
Sbjct: 123 G----KKKKAAAKKDTEDAETTEEEKKSAHVQRKLAKRLEGQKLDSHLEDQFASGRLLAC 178

Query: 543 ISSRPGQCGRADGY 584
           I+SRPGQCGRADGY
Sbjct: 179 IASRPGQCGRADGY 192


>tr|A9S3Y5|A9S3Y5_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_208398 PE=3 SV=1
          Length = 216

 Score =  252 bits (643), Expect = 1e-65
 Identities = 131/194 (67%), Positives = 146/194 (75%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRDSTH                 YELGRQ  MTKLSSNKTVR+IRVRGGN KFRALRLD
Sbjct: 3   ISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALRLD 62

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           TGNYSWGSEA TRKTR+LDVVYNASNNELVRTQTLVK+AIVQVDAAPFR  YSQHYGV++
Sbjct: 63  TGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIVQVDAAPFRTWYSQHYGVEI 122

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G             D++      E+K+S HV++K++ R E  KLD+HLEDQ ASGRLLAC
Sbjct: 123 G----KKKKSAAKKDSEDAEATEEEKKSNHVQKKLAKRVEGHKLDSHLEDQFASGRLLAC 178

Query: 543 ISSRPGQCGRADGY 584
           I+SRPGQCGRADGY
Sbjct: 179 IASRPGQCGRADGY 192


>tr|A9NMR0|A9NMR0_PICSI Ribosomal protein S8 OS=Picea sitchensis
           PE=2 SV=1
          Length = 221

 Score =  251 bits (642), Expect = 2e-65
 Identities = 128/194 (65%), Positives = 142/194 (73%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRDS H                 YELGRQP MTKLSSNKTVR++RVRGGN K+RALRLD
Sbjct: 3   ISRDSLHKKRATGGKKKVWRKKRKYELGRQPSMTKLSSNKTVRRVRVRGGNVKWRALRLD 62

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           TGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFRQ Y QHYG+D+
Sbjct: 63  TGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYEQHYGLDI 122

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G             +      + EKK+SKH+ +KI  R E  KLD+HLE+Q  SGRLLA 
Sbjct: 123 GRKKKAAAAKKETTEEGEATAEEEKKKSKHLLKKIEKRQEGHKLDSHLEEQFGSGRLLAA 182

Query: 543 ISSRPGQCGRADGY 584
           I+SRPGQCGRADGY
Sbjct: 183 IASRPGQCGRADGY 196


>tr|B8LML6|B8LML6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 221

 Score =  251 bits (641), Expect = 2e-65
 Identities = 128/194 (65%), Positives = 142/194 (73%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRDS H                 YELGRQP MTKLSSNKTVR++RVRGGN K+RALRLD
Sbjct: 3   ISRDSLHKKRATGGKKKVWRKKRKYELGRQPSMTKLSSNKTVRRVRVRGGNVKWRALRLD 62

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           TGNYSWGSE  TRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFRQ Y QHYG+D+
Sbjct: 63  TGNYSWGSEPVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYEQHYGLDI 122

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G             +      + EKK+SKH+ +KI  R E  KLD+HLE+Q ASGRLLA 
Sbjct: 123 GRKKKAAAAKKETTEEGEATAEEEKKKSKHLLKKIEKRQEGHKLDSHLEEQFASGRLLAA 182

Query: 543 ISSRPGQCGRADGY 584
           I+SRPGQCGRADGY
Sbjct: 183 IASRPGQCGRADGY 196


>tr|Q0E158|Q0E158_ORYSJ Ribosomal protein S8 OS=Oryza sativa subsp.
           japonica GN=Os02g0489400 PE=2 SV=1
          Length = 220

 Score =  250 bits (638), Expect = 5e-65
 Identities = 130/194 (67%), Positives = 140/194 (72%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRDS H                 YELGRQP  TKLSSNKTVR++RVRGGN K+RALRLD
Sbjct: 3   ISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLD 62

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           TGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+Q Y  HYGVD+
Sbjct: 63  TGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDI 122

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G               DA A   E K+S HV RK+  R + R LDAH+E+Q  SGRLLAC
Sbjct: 123 GRKKKAPAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLLAC 182

Query: 543 ISSRPGQCGRADGY 584
           ISSRPGQCGRADGY
Sbjct: 183 ISSRPGQCGRADGY 196


>tr|B8AHZ6|B8AHZ6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_07259 PE=4 SV=1
          Length = 220

 Score =  250 bits (638), Expect = 5e-65
 Identities = 130/194 (67%), Positives = 140/194 (72%)
 Frame = +3

Query: 3   ISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALRLD 182
           ISRDS H                 YELGRQP  TKLSSNKTVR++RVRGGN K+RALRLD
Sbjct: 3   ISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLD 62

Query: 183 TGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQRYSQHYGVDL 362
           TGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+Q Y  HYGVD+
Sbjct: 63  TGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDI 122

Query: 363 GXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLAC 542
           G               DA A   E K+S HV RK+  R + R LDAH+E+Q  SGRLLAC
Sbjct: 123 GRKKKAPAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLLAC 182

Query: 543 ISSRPGQCGRADGY 584
           ISSRPGQCGRADGY
Sbjct: 183 ISSRPGQCGRADGY 196