DK945693
Clone id YMU02A01NGRL0010_C05
Library
Length 282
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_C05. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GTTGGATTATCACAGATAAAAAACAAAGGCCAAAGTTCTTAGAGTTGAGGTATGCCAAAG
CCAAGGTGAATAAAACATTGAACAGTACAGCAAAACCGATCAGAGCCAAAACACCAAGCC
AATACCAATATTCTTCTGCAAAAAAACCCTCACGACTTCAAGACGGCTGTTCCAATCGTA
TGGGCATCTATGGTCCCAGAGTACGGCTGAGAAACAGCAATTTCATAAAAATGAGATTTT
AGTTTTGCACGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q76CU2
Definition sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum
Align length 35
Score (bit) 58.5
E-value 1.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945693|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_C05, 5'
(252 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1 OS=Ni... 59 1e-08
sp|Q7PC84|PDR11_ARATH Probable pleiotropic drug resistance prote... 54 1e-08
sp|Q949G3|PDR1_NICPL Pleiotropic drug resistance protein 1 OS=Ni... 56 5e-08
sp|O81016|PDR4_ARATH Probable pleiotropic drug resistance protei... 55 1e-07
sp|Q9M9E1|PDR12_ARATH Pleiotropic drug resistance protein 12 OS=... 54 3e-07
sp|Q7PC87|PDR6_ARATH Pleiotropic drug resistance protein 6 OS=Ar... 51 4e-07
sp|Q7PC88|PDR3_ARATH Probable pleiotropic drug resistance protei... 53 5e-07
sp|Q7PC80|PDR1_ORYSJ Probable pleiotropic drug resistance protei... 52 7e-07
sp|Q0JLC5|PDR3_ORYSJ Pleiotropic drug resistance protein 3 OS=Or... 52 9e-07
sp|A2WSH0|PDR3_ORYSI Pleiotropic drug resistance protein 3 OS=Or... 52 9e-07
sp|Q7FMW4|PDR15_ORYSJ Pleiotropic drug resistance protein 15 OS=... 50 3e-06
sp|Q8GU87|PDR6_ORYSJ Pleiotropic drug resistance protein 6 OS=Or... 50 5e-06
sp|Q8GU92|PDR2_ORYSJ Probable pleiotropic drug resistance protei... 50 5e-06
sp|Q7PC85|PDR10_ARATH Probable pleiotropic drug resistance prote... 49 5e-06
sp|Q2PCF1|PDR2_NICPL Pleiotropic drug resistance protein 2 OS=Ni... 49 8e-06
sp|Q5Z9S8|PDR12_ORYSJ Pleiotropic drug resistance protein 12 OS=... 49 8e-06
sp|Q94A18|PDR1_ARATH Pleiotropic drug resistance protein 1 OS=Ar... 49 1e-05
sp|Q8GU89|PDR4_ORYSJ Pleiotropic drug resistance protein 4 OS=Or... 47 2e-05
sp|O24367|TUR2_SPIPO Pleiotropic drug resistance protein TUR2 OS... 47 3e-05
sp|Q7PC86|PDR7_ARATH Probable pleiotropic drug resistance protei... 47 3e-05
sp|Q9XIE2|PDR8_ARATH Pleiotropic drug resistance protein 8 OS=Ar... 47 4e-05
sp|Q8GU88|PDR7_ORYSJ Putative pleiotropic drug resistance protei... 47 4e-05
sp|Q8S628|PDR13_ORYSJ Pleiotropic drug resistance protein 13 OS=... 47 4e-05
sp|Q9LFH0|PDR9_ARATH Probable pleiotropic drug resistance protei... 46 7e-05
sp|Q8GU86|PDR5_ORYSJ Pleiotropic drug resistance protein 5 OS=Or... 43 2e-04
sp|Q5W274|PDR3_TOBAC Pleiotropic drug resistance protein 3 OS=Ni... 44 3e-04
sp|Q9ZUT8|PDR5_ARATH Probable pleiotropic drug resistance protei... 43 6e-04
sp|Q7PC83|PDR13_ARATH Probable pleiotropic drug resistance prote... 37 0.030
sp|Q8GZ52|PDR2_ARATH Pleiotropic drug resistance protein 2 OS=Ar... 35 0.12
sp|Q084P1|ISPZ_SHEFN Probable intracellular septation protein OS... 34 0.26

>sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1
OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1
Length = 1434

Score = 58.5 bits (140), Expect = 1e-08
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = -3

Query: 148 GFFAEEYWYWLGVLALIGFAVLFNVLFTLALAYLN 44
GFF E YWYW+GV AL+GF V+FN ++LALAYLN
Sbjct: 750 GFFPEAYWYWIGVGALVGFTVVFNFCYSLALAYLN 784


>sp|Q7PC84|PDR11_ARATH Probable pleiotropic drug resistance protein
11 OS=Arabidopsis thaliana GN=PDR11 PE=2 SV=1
Length = 1454

Score = 53.9 bits (128), Expect(2) = 1e-08
Identities = 20/35 (57%), Positives = 29/35 (82%)
Frame = -3

Query: 148 GFFAEEYWYWLGVLALIGFAVLFNVLFTLALAYLN 44
GFF E YW+W+ ++AL+GF++LFN+ + LAL YLN
Sbjct: 767 GFFTEPYWFWICIVALLGFSLLFNLFYILALMYLN 801



Score = 25.4 bits (54), Expect(2) = 1e-08
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2

Query: 212 SQPYSGTIDAHTIGTAVLKS*GFF 141
S Y I+A T+G +LKS GFF
Sbjct: 746 SPNYDTRINAKTVGEVLLKSRGFF 769


>sp|Q949G3|PDR1_NICPL Pleiotropic drug resistance protein 1
OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1
Length = 1436

Score = 56.2 bits (134), Expect = 5e-08
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = -3

Query: 148 GFFAEEYWYWLGVLALIGFAVLFNVLFTLALAYLN 44
GFF + YWYW+GV AL GF V+FN+ +++ALAYLN
Sbjct: 754 GFFPDAYWYWIGVGALAGFIVMFNIAYSVALAYLN 788


>sp|O81016|PDR4_ARATH Probable pleiotropic drug resistance protein 4
OS=Arabidopsis thaliana GN=PDR4 PE=2 SV=1
Length = 1420

Score = 55.1 bits (131), Expect = 1e-07
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = -3

Query: 142 FAEEYWYWLGVLALIGFAVLFNVLFTLALAYLN 44
F+ YWYW+GV AL+G+ VLFN+LFTL LA+LN
Sbjct: 727 FSGNYWYWIGVAALLGYTVLFNILFTLFLAHLN 759


>sp|Q9M9E1|PDR12_ARATH Pleiotropic drug resistance protein 12
OS=Arabidopsis thaliana GN=PDR12 PE=2 SV=1
Length = 1423

Score = 53.5 bits (127), Expect = 3e-07
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = -3

Query: 148 GFFAEEYWYWLGVLALIGFAVLFNVLFTLALAYLNS 41
GF YWYW+G AL+GF VLFN FTLAL +LNS
Sbjct: 743 GFLPHAYWYWIGTGALLGFVVLFNFGFTLALTFLNS 778


>sp|Q7PC87|PDR6_ARATH Pleiotropic drug resistance protein 6
OS=Arabidopsis thaliana GN=PDR6 PE=2 SV=1
Length = 1453

Score = 50.8 bits (120), Expect(2) = 4e-07
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -3

Query: 148 GFFAEEYWYWLGVLALIGFAVLFNVLFTLALAYLN 44
GFF E YW+W+ + AL+GF VLFN + +AL YLN
Sbjct: 765 GFFTEPYWFWICIGALLGFTVLFNFCYIIALMYLN 799



Score = 23.5 bits (49), Expect(2) = 4e-07
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2

Query: 191 IDAHTIGTAVLKS*GFF 141
I+A T+G +LKS GFF
Sbjct: 751 INAKTVGEVLLKSRGFF 767


>sp|Q7PC88|PDR3_ARATH Probable pleiotropic drug resistance protein 3
OS=Arabidopsis thaliana GN=PDR3 PE=2 SV=1
Length = 1426

Score = 52.8 bits (125), Expect = 5e-07
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = -3

Query: 145 FFAEEYWYWLGVLALIGFAVLFNVLFTLALAYLN 44
F +YWYW+G+ LIG+A+LFN + TLALAYLN
Sbjct: 751 FPTNDYWYWIGIAVLIGYAILFNNVVTLALAYLN 784


>sp|Q7PC80|PDR1_ORYSJ Probable pleiotropic drug resistance protein 1
OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1
Length = 1468

Score = 52.4 bits (124), Expect = 7e-07
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = -3

Query: 148 GFFAEEYWYWLGVLALIGFAVLFNVLFTLALAYL 47
G F E WYW+G AL+GF +LFN+LFTLAL YL
Sbjct: 768 GIFPEAKWYWIGFGALLGFIMLFNILFTLALTYL 801


>sp|Q0JLC5|PDR3_ORYSJ Pleiotropic drug resistance protein 3 OS=Oryza
sativa subsp. japonica GN=PDR3 PE=2 SV=1
Length = 1457

Score = 52.0 bits (123), Expect = 9e-07
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = -3

Query: 148 GFFAEEYWYWLGVLALIGFAVLFNVLFTLALAYL 47
G F E WYW+G A+IGF +LFN LFTLAL YL
Sbjct: 755 GVFPEARWYWIGFGAMIGFTILFNALFTLALTYL 788


>sp|A2WSH0|PDR3_ORYSI Pleiotropic drug resistance protein 3 OS=Oryza
sativa subsp. indica GN=PDR3 PE=2 SV=1
Length = 1457

Score = 52.0 bits (123), Expect = 9e-07
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = -3

Query: 148 GFFAEEYWYWLGVLALIGFAVLFNVLFTLALAYL 47
G F E WYW+G A+IGF +LFN LFTLAL YL
Sbjct: 755 GVFPEARWYWIGFGAMIGFTILFNALFTLALTYL 788


tr_hit_id A7P5L1
Definition tr|A7P5L1|A7P5L1_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera
Align length 35
Score (bit) 58.9
E-value 1.0e-07
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945693|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_C05, 5'
(252 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7P5L1|A7P5L1_VITVI Chromosome chr4 scaffold_6, whole genome ... 59 1e-07
tr|A5BAG5|A5BAG5_VITVI Putative uncharacterized protein OS=Vitis... 59 1e-07
tr|Q76CU1|Q76CU1_TOBAC PDR-type ABC transporter 2 (Fragment) OS=... 57 2e-07
tr|A5C7G2|A5C7G2_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-07
tr|A7P7M1|A7P7M1_VITVI Chromosome chr9 scaffold_7, whole genome ... 55 2e-07
tr|A5BT56|A5BT56_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-07
tr|A7P7M4|A7P7M4_VITVI Chromosome chr9 scaffold_7, whole genome ... 55 2e-07
tr|B3U2B8|B3U2B8_CUCSA Pleiotrophic drug resistance protein OS=C... 58 3e-07
tr|A7P5L5|A7P5L5_VITVI Chromosome chr4 scaffold_6, whole genome ... 58 3e-07
tr|A7P5G3|A7P5G3_VITVI Chromosome chr4 scaffold_6, whole genome ... 57 4e-07
tr|A5BWZ0|A5BWZ0_VITVI Putative uncharacterized protein OS=Vitis... 57 4e-07
tr|A5B969|A5B969_VITVI Putative uncharacterized protein OS=Vitis... 57 4e-07
tr|A5B5B2|A5B5B2_VITVI Putative uncharacterized protein OS=Vitis... 57 4e-07
tr|A7PPH7|A7PPH7_VITVI Chromosome chr8 scaffold_23, whole genome... 56 1e-06
tr|A5ADU1|A5ADU1_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-06
tr|A7PEW4|A7PEW4_VITVI Chromosome chr11 scaffold_13, whole genom... 54 3e-06
tr|Q1M2R7|Q1M2R7_SOYBN PDR-like ABC-transporter OS=Glycine max G... 54 4e-06
tr|A5AY86|A5AY86_VITVI Putative uncharacterized protein OS=Vitis... 53 9e-06
tr|A7P7L7|A7P7L7_VITVI Chromosome chr9 scaffold_7, whole genome ... 52 9e-06
tr|A7P7K8|A7P7K8_VITVI Chromosome chr9 scaffold_7, whole genome ... 52 9e-06
tr|A2ZV97|A2ZV97_ORYSJ Putative uncharacterized protein OS=Oryza... 52 1e-05
tr|A2WSG7|A2WSG7_ORYSI Putative uncharacterized protein OS=Oryza... 52 1e-05
tr|Q6YW62|Q6YW62_ORYSJ Putative PDR-like ABC transporter OS=Oryz... 52 1e-05
tr|Q0J5Z9|Q0J5Z9_ORYSJ Os08g0384500 protein (Fragment) OS=Oryza ... 52 1e-05
tr|B8BAB8|B8BAB8_ORYSI Putative uncharacterized protein OS=Oryza... 52 1e-05
tr|A3BSP7|A3BSP7_ORYSJ Putative uncharacterized protein OS=Oryza... 52 1e-05
tr|A2ZV99|A2ZV99_ORYSJ Putative uncharacterized protein OS=Oryza... 52 1e-05
tr|Q8GU85|Q8GU85_ORYSJ PDR-like ABC transporter OS=Oryza sativa ... 45 2e-05
tr|A7P7K4|A7P7K4_VITVI Chromosome chr9 scaffold_7, whole genome ... 51 2e-05
tr|A7P746|A7P746_VITVI Chromosome chr9 scaffold_7, whole genome ... 52 2e-05

>tr|A7P5L1|A7P5L1_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032575001
PE=3 SV=1
Length = 1435

Score = 58.9 bits (141), Expect = 1e-07
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -3

Query: 148 GFFAEEYWYWLGVLALIGFAVLFNVLFTLALAYLN 44
G F E YWYWLGV ALIG+ LFN LFT+ALAYLN
Sbjct: 740 GIFPEAYWYWLGVGALIGYVFLFNFLFTVALAYLN 774


>tr|A5BAG5|A5BAG5_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_032205 PE=3 SV=1
Length = 1441

Score = 58.9 bits (141), Expect = 1e-07
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -3

Query: 148 GFFAEEYWYWLGVLALIGFAVLFNVLFTLALAYLN 44
G F E YWYWLGV ALIG+ LFN LFT+ALAYLN
Sbjct: 740 GIFPEAYWYWLGVGALIGYVFLFNFLFTVALAYLN 774


>tr|Q76CU1|Q76CU1_TOBAC PDR-type ABC transporter 2 (Fragment)
OS=Nicotiana tabacum GN=NtPDR2 PE=2 SV=1
Length = 1078

Score = 56.6 bits (135), Expect(2) = 2e-07
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = -3

Query: 148 GFFAEEYWYWLGVLALIGFAVLFNVLFTLALAYLN 44
GFF E YWYW+GV AL+GF ++FN ++LALA+LN
Sbjct: 393 GFFPEAYWYWIGVGALVGFTIVFNFCYSLALAFLN 427



Score = 22.3 bits (46), Expect(2) = 2e-07
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2

Query: 179 TIGTAVLKS*GFF 141
T+GT V+KS GFF
Sbjct: 383 TLGTTVVKSRGFF 395


>tr|A5C7G2|A5C7G2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_022715 PE=3 SV=1
Length = 1471

Score = 54.7 bits (130), Expect(2) = 2e-07
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = -3

Query: 148 GFFAEEYWYWLGVLALIGFAVLFNVLFTLALAYLNS 41
GFF E YWYW+G AL+GF ++FN +T+AL YLN+
Sbjct: 759 GFFTEAYWYWIGAGALLGFILVFNFCYTVALTYLNA 794



Score = 23.9 bits (50), Expect(2) = 2e-07
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2

Query: 200 SGTIDAHTIGTAVLKS*GFF 141
S T ++G AVLKS GFF
Sbjct: 742 SSTDSTESLGVAVLKSRGFF 761


>tr|A7P7M1|A7P7M1_VITVI Chromosome chr9 scaffold_7, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034517001
PE=3 SV=1
Length = 1440

Score = 54.7 bits (130), Expect(2) = 2e-07
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = -3

Query: 148 GFFAEEYWYWLGVLALIGFAVLFNVLFTLALAYLNS 41
GFF E YWYW+G AL+GF ++FN +T+AL YLN+
Sbjct: 739 GFFTEAYWYWIGAGALLGFILVFNFCYTVALTYLNA 774



Score = 23.9 bits (50), Expect(2) = 2e-07
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2

Query: 200 SGTIDAHTIGTAVLKS*GFF 141
S T ++G AVLKS GFF
Sbjct: 722 SSTNSTESLGVAVLKSRGFF 741


>tr|A5BT56|A5BT56_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_025401 PE=3 SV=1
Length = 1427

Score = 54.7 bits (130), Expect(2) = 2e-07
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = -3

Query: 148 GFFAEEYWYWLGVLALIGFAVLFNVLFTLALAYLNS 41
GFF E YWYW+G AL+GF ++FN +T+AL YLN+
Sbjct: 724 GFFTEAYWYWIGAGALLGFILVFNFCYTVALTYLNA 759



Score = 23.9 bits (50), Expect(2) = 2e-07
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2

Query: 200 SGTIDAHTIGTAVLKS*GFF 141
S T ++G AVLKS GFF
Sbjct: 707 SSTNSTESLGVAVLKSRGFF 726


>tr|A7P7M4|A7P7M4_VITVI Chromosome chr9 scaffold_7, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034520001
PE=4 SV=1
Length = 248

Score = 54.7 bits (130), Expect(2) = 2e-07
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = -3

Query: 148 GFFAEEYWYWLGVLALIGFAVLFNVLFTLALAYLNS 41
GFF E YWYW+G AL+GF ++FN +T+AL YLN+
Sbjct: 121 GFFTEAYWYWIGAGALLGFILVFNFCYTVALTYLNA 156



Score = 23.9 bits (50), Expect(2) = 2e-07
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2

Query: 200 SGTIDAHTIGTAVLKS*GFF 141
S T ++G AVLKS GFF
Sbjct: 104 SSTDSTESLGVAVLKSRGFF 123


>tr|B3U2B8|B3U2B8_CUCSA Pleiotrophic drug resistance protein
OS=Cucumis sativus PE=4 SV=1
Length = 1354

Score = 57.8 bits (138), Expect = 3e-07
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = -3

Query: 148 GFFAEEYWYWLGVLALIGFAVLFNVLFTLALAYLN 44
GF+ EEYWYW+ + AL GF +LFN+LFT+AL YL+
Sbjct: 729 GFYKEEYWYWICIAALFGFTLLFNILFTIALTYLD 763


>tr|A7P5L5|A7P5L5_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032579001
PE=3 SV=1
Length = 886

Score = 57.8 bits (138), Expect = 3e-07
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = -3

Query: 148 GFFAEEYWYWLGVLALIGFAVLFNVLFTLALAYLN 44
G F E +WYWLGV ALIG+ +LFN LFTLAL+YLN
Sbjct: 184 GVFTEPHWYWLGVGALIGYVLLFNFLFTLALSYLN 218


>tr|A7P5G3|A7P5G3_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032522001
PE=3 SV=1
Length = 840

Score = 57.4 bits (137), Expect = 4e-07
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = -3

Query: 142 FAEEYWYWLGVLALIGFAVLFNVLFTLALAYLN 44
F E YWYW+GV AL+G+A+LFN+LFTL L YLN
Sbjct: 728 FPESYWYWIGVGALLGYAILFNILFTLFLTYLN 760