DK945708 |
Clone id |
YMU02A01NGRL0010_C24 |
Library |
YMU02 |
Length |
531 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_C24. 5' end sequence. |
Accession |
DK945708 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL147Contig1 |
Sequence |
GAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGAAGCAGTGGTATCAACGCAG AGTGGCCATTACGGCCGGGAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGGT GTCAGGAGGAAATTCAAAGGGTGCATTTTGATGCCTAACATTGGGTATGGCTCAAACAAG AAGACAAGGCATGTGCTCCCCAATGGGTTCACGAAGTTTTTGGTGCACAATTCTGCTGAA CTGGACCTTCTTATGATGCACAACAGGAAGTTTTGTGCTGAGATTGCTCACAACGTTTCC ACTTTGAAGCGGAAATCAATTGTGGAGCGAGCCGCTCAGCTCAACATTGCAGTTACCAAT GGTTCTGCCAGGCTTCGTAGTCAGGAGGATGAGTAGGTGCTGCCCGGTCCTAATGATCAC AGCATCAAGGATGAGATAGTTTAAGAAATCTTGGAACTGTAATTTTGTATTTGTGACAGC CATGCTCTGCTGTACTGGTTTTGGAATATTCAATATCAATGATCATCTTCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P49211 |
Definition |
sp|P49211|RL321_ARATH 60S ribosomal protein L32-1 OS=Arabidopsis thaliana |
Align length |
91 |
Score (bit) |
149.0 |
E-value |
3.0e-36 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TKA7 |
Definition |
tr|A9TKA7|A9TKA7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
91 |
Score (bit) |
159.0 |
E-value |
9.0e-38 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945708|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0010_C24, 5' (413 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TKA7|A9TKA7_PHYPA Predicted protein OS=Physcomitrella paten... 159 9e-38 tr|A9U4B4|A9U4B4_PHYPA Predicted protein OS=Physcomitrella paten... 158 1e-37 tr|A9SNP9|A9SNP9_PHYPA Predicted protein OS=Physcomitrella paten... 158 1e-37 tr|A9SJ67|A9SJ67_PHYPA Predicted protein OS=Physcomitrella paten... 158 1e-37 tr|A9SYS3|A9SYS3_PHYPA Predicted protein OS=Physcomitrella paten... 156 6e-37 tr|Q6RW44|Q6RW44_CAPAN Ly200 protein OS=Capsicum annuum PE=2 SV=1 155 1e-36 tr|A7R527|A7R527_VITVI Chromosome undetermined scaffold_840, who... 154 3e-36 tr|A5BD13|A5BD13_VITVI Putative uncharacterized protein (Chromos... 154 3e-36 tr|Q3HVK3|Q3HVK3_SOLTU Ly200-like protein OS=Solanum tuberosum P... 153 5e-36 tr|A9PBE9|A9PBE9_POPTR Putative uncharacterized protein OS=Popul... 151 1e-35 tr|A9NMY0|A9NMY0_PICSI Putative uncharacterized protein OS=Picea... 151 2e-35 tr|Q84QW3|Q84QW3_ORYSJ Os08g0524600 protein OS=Oryza sativa subs... 150 2e-35 tr|Q3MST7|Q3MST7_ORYSI Putative uncharacterized protein OS=Oryza... 150 2e-35 tr|Q0J0R0|Q0J0R0_ORYSJ Os09g0501700 protein OS=Oryza sativa subs... 150 2e-35 tr|Q0J0Q8|Q0J0Q8_ORYSJ Os09g0502000 protein OS=Oryza sativa subs... 150 2e-35 tr|B8BDC7|B8BDC7_ORYSI Putative uncharacterized protein OS=Oryza... 150 2e-35 tr|B8B8V1|B8B8V1_ORYSI Putative uncharacterized protein OS=Oryza... 150 2e-35 tr|B7E905|B7E905_ORYSJ cDNA clone:001-121-A02, full insert seque... 150 2e-35 tr|B6T872|B6T872_MAIZE 60S ribosomal protein L32 OS=Zea mays PE=... 150 2e-35 tr|A9NN33|A9NN33_PICSI Putative uncharacterized protein OS=Picea... 150 2e-35 tr|A3C0C5|A3C0C5_ORYSJ Putative uncharacterized protein OS=Oryza... 150 2e-35 tr|A3C0C3|A3C0C3_ORYSJ Putative uncharacterized protein OS=Oryza... 150 2e-35 tr|A3BV04|A3BV04_ORYSJ Putative uncharacterized protein OS=Oryza... 150 2e-35 tr|A2Z2T1|A2Z2T1_ORYSI Putative uncharacterized protein OS=Oryza... 150 2e-35 tr|A9PDT0|A9PDT0_POPTR Putative uncharacterized protein OS=Popul... 150 3e-35 tr|B4FFZ7|B4FFZ7_MAIZE Putative uncharacterized protein OS=Zea m... 149 5e-35 tr|A5Y735|A5Y735_CUCME 60S ribosomal protein L32A (Fragment) OS=... 149 7e-35 tr|B6SX67|B6SX67_MAIZE 60S ribosomal protein L32 OS=Zea mays PE=... 149 9e-35 tr|B4FI53|B4FI53_MAIZE 60S ribosomal protein L32 OS=Zea mays PE=... 149 9e-35 tr|B3TLM9|B3TLM9_ELAGV Ribosomal protein L32 OS=Elaeis guineensi... 149 9e-35
>tr|A9TKA7|A9TKA7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_108328 PE=4 SV=1 Length = 133
Score = 159 bits (401), Expect = 9e-38 Identities = 77/91 (84%), Positives = 85/91 (93%) Frame = +3
Query: 3 VRRKFKGCILMPNIGYGSNKKTRHVLPNGFTKFLVHNSAELDLLMMHNRKFCAEIAHNVS 182 VRRKFKG LMPNIGYGSNKKTRHVLP+GF KFLVHN +L+LL+MHNRK+ AEIAHNVS Sbjct: 43 VRRKFKGTTLMPNIGYGSNKKTRHVLPSGFVKFLVHNVKDLELLLMHNRKYSAEIAHNVS 102
Query: 183 TLKRKSIVERAAQLNIAVTNGSARLRSQEDE 275 TLKRK+IVERAAQLN+A+TNGSARLRSQEDE Sbjct: 103 TLKRKAIVERAAQLNVALTNGSARLRSQEDE 133
>tr|A9U4B4|A9U4B4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228178 PE=4 SV=1 Length = 133
Score = 158 bits (399), Expect = 1e-37 Identities = 77/91 (84%), Positives = 85/91 (93%) Frame = +3
Query: 3 VRRKFKGCILMPNIGYGSNKKTRHVLPNGFTKFLVHNSAELDLLMMHNRKFCAEIAHNVS 182 VRRKFKG LMPNIGYGSNKKTRHVLP+GF KFLVHN +++LL+MHNRK+ AEIAHNVS Sbjct: 43 VRRKFKGTTLMPNIGYGSNKKTRHVLPSGFVKFLVHNVKDVELLLMHNRKYSAEIAHNVS 102
Query: 183 TLKRKSIVERAAQLNIAVTNGSARLRSQEDE 275 TLKRK+IVERAAQLNIA+TNGSARLRSQEDE Sbjct: 103 TLKRKAIVERAAQLNIALTNGSARLRSQEDE 133
>tr|A9SNP9|A9SNP9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165850 PE=4 SV=1 Length = 133
Score = 158 bits (399), Expect = 1e-37 Identities = 77/91 (84%), Positives = 85/91 (93%) Frame = +3
Query: 3 VRRKFKGCILMPNIGYGSNKKTRHVLPNGFTKFLVHNSAELDLLMMHNRKFCAEIAHNVS 182 VRRKFKG LMPNIGYGSNKKTRHVLP+GF KFLVHN +++LL+MHNRK+ AEIAHNVS Sbjct: 43 VRRKFKGTTLMPNIGYGSNKKTRHVLPSGFVKFLVHNVKDVELLLMHNRKYSAEIAHNVS 102
Query: 183 TLKRKSIVERAAQLNIAVTNGSARLRSQEDE 275 TLKRK+IVERAAQLNIA+TNGSARLRSQEDE Sbjct: 103 TLKRKAIVERAAQLNIALTNGSARLRSQEDE 133
>tr|A9SJ67|A9SJ67_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_212907 PE=4 SV=1 Length = 133
Score = 158 bits (399), Expect = 1e-37 Identities = 77/91 (84%), Positives = 85/91 (93%) Frame = +3
Query: 3 VRRKFKGCILMPNIGYGSNKKTRHVLPNGFTKFLVHNSAELDLLMMHNRKFCAEIAHNVS 182 VRRKFKG LMPNIGYGSNKKTRHVLP+GF KFLVHN +++LL+MHNRK+ AEIAHNVS Sbjct: 43 VRRKFKGTTLMPNIGYGSNKKTRHVLPSGFVKFLVHNVKDVELLLMHNRKYSAEIAHNVS 102
Query: 183 TLKRKSIVERAAQLNIAVTNGSARLRSQEDE 275 TLKRK+IVERAAQLNIA+TNGSARLRSQEDE Sbjct: 103 TLKRKAIVERAAQLNIALTNGSARLRSQEDE 133
>tr|A9SYS3|A9SYS3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_217206 PE=4 SV=1 Length = 133
Score = 156 bits (394), Expect = 6e-37 Identities = 76/91 (83%), Positives = 83/91 (91%) Frame = +3
Query: 3 VRRKFKGCILMPNIGYGSNKKTRHVLPNGFTKFLVHNSAELDLLMMHNRKFCAEIAHNVS 182 VRRKFKG LMPNIGYGSNKKTRHVLP+GF KF VHN +L+LL+MHNRK+ AEIAHNVS Sbjct: 43 VRRKFKGTTLMPNIGYGSNKKTRHVLPSGFVKFSVHNVTDLELLLMHNRKYSAEIAHNVS 102
Query: 183 TLKRKSIVERAAQLNIAVTNGSARLRSQEDE 275 TLKRK+IVERAAQLN+AVTNGSARL SQEDE Sbjct: 103 TLKRKAIVERAAQLNVAVTNGSARLHSQEDE 133
>tr|Q6RW44|Q6RW44_CAPAN Ly200 protein OS=Capsicum annuum PE=2 SV=1 Length = 133
Score = 155 bits (391), Expect = 1e-36 Identities = 73/91 (80%), Positives = 83/91 (91%) Frame = +3
Query: 3 VRRKFKGCILMPNIGYGSNKKTRHVLPNGFTKFLVHNSAELDLLMMHNRKFCAEIAHNVS 182 VRRKFKGC+LMPNIGYGS+KKTRH LPNGF KF+VHN++EL++LMMHNR +CAEIAHNVS Sbjct: 43 VRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNASELEVLMMHNRTYCAEIAHNVS 102
Query: 183 TLKRKSIVERAAQLNIAVTNGSARLRSQEDE 275 T KRK IVERAAQL++ VTN ARLRSQEDE Sbjct: 103 TRKRKEIVERAAQLDVVVTNKLARLRSQEDE 133
>tr|A7R527|A7R527_VITVI Chromosome undetermined scaffold_840, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00004884001 PE=4 SV=1 Length = 133
Score = 154 bits (388), Expect = 3e-36 Identities = 73/91 (80%), Positives = 81/91 (89%) Frame = +3
Query: 3 VRRKFKGCILMPNIGYGSNKKTRHVLPNGFTKFLVHNSAELDLLMMHNRKFCAEIAHNVS 182 VRRKFKGC+LMPNIGYGS+KKTRH LPNGF KF+VHN EL+LLMMHNR +CAEIAHN+S Sbjct: 43 VRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVQELELLMMHNRTYCAEIAHNIS 102
Query: 183 TLKRKSIVERAAQLNIAVTNGSARLRSQEDE 275 T KRK IVERAAQL++ VTN ARLRSQEDE Sbjct: 103 TRKRKDIVERAAQLDVVVTNKLARLRSQEDE 133
>tr|A5BD13|A5BD13_VITVI Putative uncharacterized protein (Chromosome undetermined scaffold_143, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00003384001 PE=4 SV=1 Length = 133
Score = 154 bits (388), Expect = 3e-36 Identities = 74/91 (81%), Positives = 81/91 (89%) Frame = +3
Query: 3 VRRKFKGCILMPNIGYGSNKKTRHVLPNGFTKFLVHNSAELDLLMMHNRKFCAEIAHNVS 182 VRRKFKGC LMPNIGYGS+KKTRH LPNGF KF+VHN+ EL+LLMMHNR +CAEIAHNVS Sbjct: 43 VRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNAQELELLMMHNRTYCAEIAHNVS 102
Query: 183 TLKRKSIVERAAQLNIAVTNGSARLRSQEDE 275 T KRK IVERAAQL++ VTN ARLRSQEDE Sbjct: 103 TRKRKEIVERAAQLDVVVTNKLARLRSQEDE 133
>tr|Q3HVK3|Q3HVK3_SOLTU Ly200-like protein OS=Solanum tuberosum PE=2 SV=1 Length = 133
Score = 153 bits (386), Expect = 5e-36 Identities = 71/91 (78%), Positives = 82/91 (90%) Frame = +3
Query: 3 VRRKFKGCILMPNIGYGSNKKTRHVLPNGFTKFLVHNSAELDLLMMHNRKFCAEIAHNVS 182 VRRKFKGC+LMPNIGYGS+KKTRH LPNGF KF+VHN++EL++LMMHNR +CAEIAHNVS Sbjct: 43 VRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNASELEILMMHNRTYCAEIAHNVS 102
Query: 183 TLKRKSIVERAAQLNIAVTNGSARLRSQEDE 275 T KRK IVERAAQL++ +TN ARL SQEDE Sbjct: 103 TRKRKEIVERAAQLDVVITNKLARLHSQEDE 133
>tr|A9PBE9|A9PBE9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 133
Score = 151 bits (382), Expect = 1e-35 Identities = 73/91 (80%), Positives = 80/91 (87%) Frame = +3
Query: 3 VRRKFKGCILMPNIGYGSNKKTRHVLPNGFTKFLVHNSAELDLLMMHNRKFCAEIAHNVS 182 VRRKFKGC LMPNIGYGS+KKTRH LPNGF KF+VHN EL++LMMHNR +CAEIAHNVS Sbjct: 43 VRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHNVS 102
Query: 183 TLKRKSIVERAAQLNIAVTNGSARLRSQEDE 275 T KRK IVERAAQL++ VTN ARLRSQEDE Sbjct: 103 TRKRKEIVERAAQLDVVVTNKLARLRSQEDE 133
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