DK945730 [AcEST]

DK945730
Clone id	YMU02A01NGRL0010_E06
Library	YMU02
Length	327
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_E06. 5' end sequence.
Accession	DK945730
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	CL1Contig2
Sequence	AAGTCCTGGAAGAAAAGGGGGGCTTACCTACTAAATATCTGACGTGGCAGAAGGGATCTC CCAGAGACAAGAAGGGATGATATATTGGAACGACAAGCAGGGAGGAGAAAGAATTGGGCA AAAATGATGAATAGAATAAATTGAAAGAAAAGTGAAAAAAAAAATGGAAAAGGGCAAGAA GGCCTTGTGAAAATATTACGATTTTTGATCTCCCAGAGACAAGAAGGGATGATATATTGG AACGACAAGCAGGGAGGAGAAAGAATTGGGCAAAAATGATGAATAGAATAAATTGAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q6C187
Definition	sp\|Q6C187\|BBP_YARLI Branchpoint-bridging protein OS=Yarrowia lipolytica
Align length	30
Score (bit)	28.9
E-value	8.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK945730\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0010_E06, 5' (295 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q6C187\|BBP_YARLI Branchpoint-bridging protein OS=Yarrowia lip... 29 8.2 >sp\|Q6C187\|BBP_YARLI Branchpoint-bridging protein OS=Yarrowia lipolytica GN=BBP PE=3 SV=1 Length = 605 Score = 28.9 bits (63), Expect = 8.2 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = +3 Query: 204 FDLPETRRDDILERQAGRRK-NWAKMMNRI 290 F +P TR DD +RQ GRRK W+ N++ Sbjct: 47 FVVPPTRHDDGTKRQPGRRKQRWSHGENKV 76
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q53N99
Definition	tr\|Q53N99\|Q53N99_ORYSJ Os11g0245200 protein OS=Oryza sativa subsp. japonica
Align length	24
Score (bit)	32.7
E-value	9.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK945730\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0010_E06, 5' (295 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q53N99\|Q53N99_ORYSJ Os11g0245200 protein OS=Oryza sativa subs... 33 9.2 tr\|B8BJW1\|B8BJW1_ORYSI Putative uncharacterized protein OS=Oryza... 33 9.2 tr\|A3CA56\|A3CA56_ORYSJ Putative uncharacterized protein OS=Oryza... 33 9.2 >tr\|Q53N99\|Q53N99_ORYSJ Os11g0245200 protein OS=Oryza sativa subsp. japonica GN=Os11g0245200 PE=4 SV=1 Length = 897 Score = 32.7 bits (73), Expect = 9.2 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -3 Query: 290 YSIHHFCPILSPPCLSFQYIIPSC 219 YS CP L P CLS QY+ P+C Sbjct: 352 YSTQSICPGLPPTCLSDQYLSPNC 375 >tr\|B8BJW1\|B8BJW1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35675 PE=4 SV=1 Length = 954 Score = 32.7 bits (73), Expect = 9.2 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -3 Query: 290 YSIHHFCPILSPPCLSFQYIIPSC 219 YS CP L P CLS QY+ P+C Sbjct: 427 YSTQSICPGLPPTCLSDQYLSPNC 450 >tr\|A3CA56\|A3CA56_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_032178 PE=4 SV=1 Length = 893 Score = 32.7 bits (73), Expect = 9.2 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -3 Query: 290 YSIHHFCPILSPPCLSFQYIIPSC 219 YS CP L P CLS QY+ P+C Sbjct: 352 YSTQSICPGLPPTCLSDQYLSPNC 375