DK945732
Clone id YMU02A01NGRL0010_E10
Library
Length 602
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_E10. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GGACACACGAAGGCAGCCCCGCCTCTCTCCCTCCGCACAAACACAGGAGTAGAAAATGGC
GCCCGCTGCTGCCGCGGCAGCGAGCAGTGGCAGTGCCGCCTTCTCCTGTCCCACTCTCTC
CCGAGTACCTGCCCACTCCTCGACACTCTTCTCCTTCTTCTCCAGATCACGTGCCCCCCG
CTACTTCCTTCAGCCTCAGCCTCAGCTGGCGTTGATGATGGGTGGCCTACACATTGTCCG
CGCTGAGAGTAGTGTGGATGAGGCCACCCCCCCGGCAGATGATCCGCCGCCGCCGCCTCC
CAAGCAGAGCGTGCTTGAAGCTCTCGATTTCTCTGCCGTCCGTTCTCAAGACGACGCCCA
GCTCCTGGACGATGCTCGCTATGCTACCAACATGGGCGAGAAGATGAGCCGCGAGCAGTA
TGCGGCCTTGAGAAGGAAGATAGGTGGCACGTACAGAGACTTCTTCAAGGACTCTATCGA
AGTGGAAGGGGAGTTCGTGGATGAAGGGTGGGTGGATAAGAGCTGCAGATTCTGCAAGAA
AGACACAGCGTCTGAAGCCCGCACCGTTGATAAGTTTGGTCGGTACGCACACATTTCCTG
CT
■■Homology search results ■■ -
sp_hit_id A7GWZ2
Definition sp|A7GWZ2|ENGA_CAMC5 GTP-binding protein engA OS=Campylobacter curvus (strain 525.92)
Align length 58
Score (bit) 32.3
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945732|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_E10, 5'
(602 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A7GWZ2|ENGA_CAMC5 GTP-binding protein engA OS=Campylobacter c... 32 1.9
sp|Q5KIA9|SET1_CRYNE Histone-lysine N-methyltransferase, H3 lysi... 31 4.2
sp|Q01656|RSP4_CHLRE Flagellar radial spoke protein 4 OS=Chlamyd... 30 7.2
sp|P09053|AVTA_ECOLI Valine--pyruvate aminotransferase OS=Escher... 24 9.3
sp|Q9RY51|SSB_DEIRA Single-stranded DNA-binding protein OS=Deino... 30 9.4
sp|Q01373|FOX2_NEUCR Peroxisomal hydratase-dehydrogenase-epimera... 30 9.4

>sp|A7GWZ2|ENGA_CAMC5 GTP-binding protein engA OS=Campylobacter
curvus (strain 525.92) GN=engA PE=3 SV=1
Length = 461

Score = 32.3 bits (72), Expect = 1.9
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = +2

Query: 416 QYAALRRKIGGTYRDFFKDSIEVEGE---FVDEGWVDKSCRFCKK---DTASEARTVD 571
Q A+ +I GT RD K IEVEG+ +D G +D+S K T +EA+ D
Sbjct: 24 QRIAITSEISGTTRDTNKAKIEVEGKDCLLIDSGGLDESSELFKNVKFKTLAEAKNSD 81


>sp|Q5KIA9|SET1_CRYNE Histone-lysine N-methyltransferase, H3
lysine-4 specific OS=Cryptococcus neoformans GN=SET1
PE=3 SV=1
Length = 1469

Score = 31.2 bits (69), Expect = 4.2
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = -1

Query: 383 HSEHRPGAGRRLENGRQRNRELQARSAWEAAAADHLPGGWPHPHYSQRGQCVGHPSSTPA 204
HS PG G+ +NG+ R+R L + E ++ + + QR + PS +P
Sbjct: 177 HSHREPGRGKEHQNGQGRDRSLYRDHSRERESSRDERDRYSEEYKHQRSKARFSPSPSPE 236

Query: 203 EAEAEGS 183
+ + S
Sbjct: 237 RSRLKSS 243


>sp|Q01656|RSP4_CHLRE Flagellar radial spoke protein 4
OS=Chlamydomonas reinhardtii GN=RSP4 PE=3 SV=1
Length = 465

Score = 30.4 bits (67), Expect = 7.2
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = -1

Query: 323 ELQARSAWEAAAADHL--PGGWPH--PHYSQRGQCVGHPSSTPAEAEAE 189
EL+ WE A + P W H PH +G+C H P +A+ +
Sbjct: 298 ELERAEDWEPPAGREMAAPTAWVHVRPHLKSQGRCEVHKRELPEDADED 346


>sp|P09053|AVTA_ECOLI Valine--pyruvate aminotransferase
OS=Escherichia coli (strain K12) GN=avtA PE=3 SV=3
Length = 417

Score = 23.9 bits (50), Expect(2) = 9.3
Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = -1

Query: 338 RQRNRELQARSAWEAAAADHLPG---GWPHPHYSQRGQCVGHPSSTPA 204
+Q + L+AR + PG WPH H R V P A
Sbjct: 353 KQLYQRLKARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYVPEPEKIEA 400



Score = 23.5 bits (49), Expect(2) = 9.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2

Query: 490 PFHFDRVLEEVSVRATYLP 434
PF++ RV E +++ YLP
Sbjct: 308 PFYYQRVQETIAIIRRYLP 326


>sp|Q9RY51|SSB_DEIRA Single-stranded DNA-binding protein
OS=Deinococcus radiodurans GN=ssb PE=1 SV=2
Length = 301

Score = 30.0 bits (66), Expect = 9.4
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +2

Query: 380 YATNMGEKMSREQY--AALRRKIGGTYRDFFK-DSIEVEGEFVDEGWVDKSCRFCKKDTA 550
Y G++ + Y A L R + ++ K D + + G V+EGW DK + T
Sbjct: 164 YQDRQGQRQEKVHYIDATLWRDLAENMKELRKGDPVMIMGRLVNEGWTDKDGN-KRNSTR 222

Query: 551 SEARTVDKFGRYA 589
EA V+ R A
Sbjct: 223 VEATRVEALARGA 235


>sp|Q01373|FOX2_NEUCR Peroxisomal hydratase-dehydrogenase-epimerase
OS=Neurospora crassa GN=fox-2 PE=1 SV=1
Length = 894

Score = 30.0 bits (66), Expect = 9.4
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 14/76 (18%)
Frame = -2

Query: 511 PPFIHELPFHFDRVLEEVS------------VRATYLPSQGRILLAAHLLAHV--GSIAS 374
PPF E+PF FD ++ S VR +P+ GR++ LL V GS A
Sbjct: 669 PPFNTEMPFSFDDIVPNFSPMMLLHGEQYLEVRKYPIPTSGRLVSKGKLLEVVDKGSAAI 728

Query: 373 IVQELGVVLRTDGREI 326
+ Q + G E+
Sbjct: 729 VKQGITTFNAETGEEL 744


tr_hit_id B8LP25
Definition tr|B8LP25|B8LP25_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 98
Score (bit) 152.0
E-value 1.0e-35
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945732|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_E10, 5'
(602 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LP25|B8LP25_PICSI Putative uncharacterized protein OS=Picea... 152 1e-35
tr|A9RPH7|A9RPH7_PHYPA Predicted protein (Fragment) OS=Physcomit... 146 8e-34
tr|A7Q3U2|A7Q3U2_VITVI Chromosome chr13 scaffold_48, whole genom... 145 2e-33
tr|A5ACL9|A5ACL9_VITVI Putative uncharacterized protein OS=Vitis... 145 2e-33
tr|Q9LYL4|Q9LYL4_ARATH Putative uncharacterized protein F18O21_2... 145 2e-33
tr|Q8LRD0|Q8LRD0_ORYSJ Putative uncharacterized protein P0031D02... 142 1e-32
tr|B6SY86|B6SY86_MAIZE Putative uncharacterized protein OS=Zea m... 142 1e-32
tr|B6SQ41|B6SQ41_MAIZE Putative uncharacterized protein OS=Zea m... 142 1e-32
tr|A2WWH6|A2WWH6_ORYSI Putative uncharacterized protein OS=Oryza... 142 1e-32
tr|Q00SR8|Q00SR8_OSTTA Homology to unknown gene OS=Ostreococcus ... 64 5e-09
tr|A4S9S3|A4S9S3_OSTLU Predicted protein OS=Ostreococcus lucimar... 60 1e-07
tr|B8AUK3|B8AUK3_ORYSI Putative uncharacterized protein OS=Oryza... 37 1.2
tr|Q5M6A3|Q5M6A3_STRT2 Polar amino acid ABC uptake transporter A... 34 5.7
tr|Q5M1R2|Q5M1R2_STRT1 Amino acid (Glutamine) ABC transporter AT... 34 5.7
tr|Q03MN8|Q03MN8_STRTD ABC-type polar amino acid transport syste... 34 5.7
tr|Q30BN3|Q30BN3_ADEG8 ORF12 OS=Avian adenovirus 8 (strain ATCC ... 33 9.8
tr|A2SCL0|A2SCL0_METPP Formate dehydrogenase, alpha subunit OS=M... 33 9.8
tr|Q4N4D9|Q4N4D9_THEPA Sec23, putative OS=Theileria parva GN=TP0... 33 9.8

>tr|B8LP25|B8LP25_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 202

Score = 152 bits (385), Expect = 1e-35
Identities = 69/98 (70%), Positives = 85/98 (86%)
Frame = +2

Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487
S+ EALDFS VRS++DA LL+DAR AT G++MSREQYAALRRKIGGTY+DFFK +EVE
Sbjct: 89 SITEALDFSEVRSEEDAVLLEDARDATKSGDRMSREQYAALRRKIGGTYQDFFKGYVEVE 148

Query: 488 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601
GE+V+EGWVDK+C+ CKKDT++E R VD GRYAH++C
Sbjct: 149 GEYVEEGWVDKTCKICKKDTSNEPRNVDAMGRYAHVAC 186


>tr|A9RPH7|A9RPH7_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_48718 PE=4 SV=1
Length = 128

Score = 146 bits (369), Expect = 8e-34
Identities = 67/98 (68%), Positives = 80/98 (81%)
Frame = +2

Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487
S+ +ALDF+AVRS+ DA+LL DAR AT GEKMSREQY ALRRKIGGTY DFFK +EV+
Sbjct: 15 SLTDALDFAAVRSEKDAELLQDARQATKSGEKMSREQYGALRRKIGGTYGDFFKGYVEVD 74

Query: 488 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601
G +VDEGWVDK+C++CKKDT RT D GRYAH++C
Sbjct: 75 GAYVDEGWVDKTCKYCKKDTKGAPRTKDSSGRYAHVAC 112


>tr|A7Q3U2|A7Q3U2_VITVI Chromosome chr13 scaffold_48, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00029417001
PE=4 SV=1
Length = 176

Score = 145 bits (366), Expect = 2e-33
Identities = 66/98 (67%), Positives = 81/98 (82%)
Frame = +2

Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487
SV EALDFS VRS +DAQLL+ AR AT G +MSREQY ALRRKIGGTY+DFFK ++V+
Sbjct: 63 SVTEALDFSQVRSVEDAQLLEKARDATQSGGRMSREQYGALRRKIGGTYKDFFKSYVDVD 122

Query: 488 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601
G++V+EGWVDK+C+ CK+DT E R VDKFGRY H++C
Sbjct: 123 GQYVEEGWVDKTCKVCKEDTRGEPRQVDKFGRYVHVAC 160


>tr|A5ACL9|A5ACL9_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_043600 PE=4 SV=1
Length = 176

Score = 145 bits (366), Expect = 2e-33
Identities = 66/98 (67%), Positives = 81/98 (82%)
Frame = +2

Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487
SV EALDFS VRS +DAQLL+ AR AT G +MSREQY ALRRKIGGTY+DFFK ++V+
Sbjct: 63 SVTEALDFSQVRSVEDAQLLEKARDATQSGGRMSREQYGALRRKIGGTYKDFFKSYVDVD 122

Query: 488 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601
G++V+EGWVDK+C+ CK+DT E R VDKFGRY H++C
Sbjct: 123 GQYVEEGWVDKTCKVCKEDTRGEPRQVDKFGRYVHVAC 160


>tr|Q9LYL4|Q9LYL4_ARATH Putative uncharacterized protein F18O21_250
(Putative uncharacterized protein At3g56290) (Putative
uncharacterized protein At3g56290; F18O21_250)
OS=Arabidopsis thaliana GN=F18O21_250 PE=2 SV=1
Length = 173

Score = 145 bits (365), Expect = 2e-33
Identities = 65/95 (68%), Positives = 80/95 (84%)
Frame = +2

Query: 317 EALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVEGEF 496
+ALDFS VRS+ DA+LL +AR AT G KM++EQY ALRRKIGGTY+DFFK +EV+G++
Sbjct: 63 DALDFSQVRSEKDAELLYEAREATKSGRKMTQEQYGALRRKIGGTYKDFFKSYVEVDGQY 122

Query: 497 VDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601
V+EGWVDK+C+ CKKDT EAR VDK GRYAH+SC
Sbjct: 123 VEEGWVDKTCKICKKDTKGEARQVDKLGRYAHVSC 157


>tr|Q8LRD0|Q8LRD0_ORYSJ Putative uncharacterized protein P0031D02.18
(Putative uncharacterized protein) (Os01g0823600
protein) OS=Oryza sativa subsp. japonica GN=P0031D02.18
PE=4 SV=1
Length = 170

Score = 142 bits (359), Expect = 1e-32
Identities = 64/98 (65%), Positives = 81/98 (82%)
Frame = +2

Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487
S+ EALDFS VRS+ DA+LL +AR AT G +M++EQY ALRRKIGGTY+DFFK ++V+
Sbjct: 57 SITEALDFSQVRSEKDAELLYEAREATKDGGRMTKEQYGALRRKIGGTYKDFFKSYVDVD 116

Query: 488 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601
GE+V+EGWVDK+C+ CKKDT E R VDK GRYAH++C
Sbjct: 117 GEYVEEGWVDKTCKVCKKDTRGEPRQVDKLGRYAHVAC 154


>tr|B6SY86|B6SY86_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 162

Score = 142 bits (359), Expect = 1e-32
Identities = 64/98 (65%), Positives = 81/98 (82%)
Frame = +2

Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487
S+ EALDFS VRS+ DA+LL +AR +T G +M+REQY ALRRKIGGTY+DFFK +EV+
Sbjct: 49 SITEALDFSQVRSEKDAELLYEARESTRGGGRMTREQYGALRRKIGGTYQDFFKSYVEVD 108

Query: 488 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601
G++V+EGWVDK+C+ CKKDT E R VDK GRYAH++C
Sbjct: 109 GQYVEEGWVDKTCKICKKDTRGEPRQVDKLGRYAHVAC 146


>tr|B6SQ41|B6SQ41_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 162

Score = 142 bits (359), Expect = 1e-32
Identities = 64/98 (65%), Positives = 81/98 (82%)
Frame = +2

Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487
S+ EALDFS VRS+ DA+LL +AR +T G +M+REQY ALRRKIGGTY+DFFK +EV+
Sbjct: 49 SITEALDFSQVRSEKDAELLYEARESTKGGGRMTREQYGALRRKIGGTYQDFFKSYVEVD 108

Query: 488 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601
G++V+EGWVDK+C+ CKKDT E R VDK GRYAH++C
Sbjct: 109 GQYVEEGWVDKTCKICKKDTRGEPRQVDKLGRYAHVAC 146


>tr|A2WWH6|A2WWH6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_04255 PE=4 SV=1
Length = 170

Score = 142 bits (359), Expect = 1e-32
Identities = 64/98 (65%), Positives = 81/98 (82%)
Frame = +2

Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487
S+ EALDFS VRS+ DA+LL +AR AT G +M++EQY ALRRKIGGTY+DFFK ++V+
Sbjct: 57 SITEALDFSQVRSEKDAELLYEAREATKDGGRMTKEQYGALRRKIGGTYKDFFKSYVDVD 116

Query: 488 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601
GE+V+EGWVDK+C+ CKKDT E R VDK GRYAH++C
Sbjct: 117 GEYVEEGWVDKTCKVCKKDTRGEPRQVDKLGRYAHVAC 154


>tr|Q00SR8|Q00SR8_OSTTA Homology to unknown gene OS=Ostreococcus
tauri GN=Ot18g00990 PE=4 SV=1
Length = 161

Score = 64.3 bits (155), Expect = 5e-09
Identities = 36/71 (50%), Positives = 47/71 (66%)
Frame = +2

Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487
SV ALDF + D LL+ AR N G+KMS EQY ALRRK+GGT FF ++++V
Sbjct: 61 SVARALDFQE-DIESDRGLLNAARRMRN-GDKMSTEQYGALRRKVGGTKGGFFGENVDVV 118

Query: 488 GEFVDEGWVDK 520
G + D+G+VDK
Sbjct: 119 GAYTDKGYVDK 129