DK945732 |
Clone id |
YMU02A01NGRL0010_E10 |
Library |
YMU02 |
Length |
602 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_E10. 5' end sequence. |
Accession |
DK945732 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL1675Contig1 |
Sequence |
GGACACACGAAGGCAGCCCCGCCTCTCTCCCTCCGCACAAACACAGGAGTAGAAAATGGC GCCCGCTGCTGCCGCGGCAGCGAGCAGTGGCAGTGCCGCCTTCTCCTGTCCCACTCTCTC CCGAGTACCTGCCCACTCCTCGACACTCTTCTCCTTCTTCTCCAGATCACGTGCCCCCCG CTACTTCCTTCAGCCTCAGCCTCAGCTGGCGTTGATGATGGGTGGCCTACACATTGTCCG CGCTGAGAGTAGTGTGGATGAGGCCACCCCCCCGGCAGATGATCCGCCGCCGCCGCCTCC CAAGCAGAGCGTGCTTGAAGCTCTCGATTTCTCTGCCGTCCGTTCTCAAGACGACGCCCA GCTCCTGGACGATGCTCGCTATGCTACCAACATGGGCGAGAAGATGAGCCGCGAGCAGTA TGCGGCCTTGAGAAGGAAGATAGGTGGCACGTACAGAGACTTCTTCAAGGACTCTATCGA AGTGGAAGGGGAGTTCGTGGATGAAGGGTGGGTGGATAAGAGCTGCAGATTCTGCAAGAA AGACACAGCGTCTGAAGCCCGCACCGTTGATAAGTTTGGTCGGTACGCACACATTTCCTG CT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A7GWZ2 |
Definition |
sp|A7GWZ2|ENGA_CAMC5 GTP-binding protein engA OS=Campylobacter curvus (strain 525.92) |
Align length |
58 |
Score (bit) |
32.3 |
E-value |
1.9 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LP25 |
Definition |
tr|B8LP25|B8LP25_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
98 |
Score (bit) |
152.0 |
E-value |
1.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945732|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0010_E10, 5' (602 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LP25|B8LP25_PICSI Putative uncharacterized protein OS=Picea... 152 1e-35 tr|A9RPH7|A9RPH7_PHYPA Predicted protein (Fragment) OS=Physcomit... 146 8e-34 tr|A7Q3U2|A7Q3U2_VITVI Chromosome chr13 scaffold_48, whole genom... 145 2e-33 tr|A5ACL9|A5ACL9_VITVI Putative uncharacterized protein OS=Vitis... 145 2e-33 tr|Q9LYL4|Q9LYL4_ARATH Putative uncharacterized protein F18O21_2... 145 2e-33 tr|Q8LRD0|Q8LRD0_ORYSJ Putative uncharacterized protein P0031D02... 142 1e-32 tr|B6SY86|B6SY86_MAIZE Putative uncharacterized protein OS=Zea m... 142 1e-32 tr|B6SQ41|B6SQ41_MAIZE Putative uncharacterized protein OS=Zea m... 142 1e-32 tr|A2WWH6|A2WWH6_ORYSI Putative uncharacterized protein OS=Oryza... 142 1e-32 tr|Q00SR8|Q00SR8_OSTTA Homology to unknown gene OS=Ostreococcus ... 64 5e-09 tr|A4S9S3|A4S9S3_OSTLU Predicted protein OS=Ostreococcus lucimar... 60 1e-07 tr|B8AUK3|B8AUK3_ORYSI Putative uncharacterized protein OS=Oryza... 37 1.2 tr|Q5M6A3|Q5M6A3_STRT2 Polar amino acid ABC uptake transporter A... 34 5.7 tr|Q5M1R2|Q5M1R2_STRT1 Amino acid (Glutamine) ABC transporter AT... 34 5.7 tr|Q03MN8|Q03MN8_STRTD ABC-type polar amino acid transport syste... 34 5.7 tr|Q30BN3|Q30BN3_ADEG8 ORF12 OS=Avian adenovirus 8 (strain ATCC ... 33 9.8 tr|A2SCL0|A2SCL0_METPP Formate dehydrogenase, alpha subunit OS=M... 33 9.8 tr|Q4N4D9|Q4N4D9_THEPA Sec23, putative OS=Theileria parva GN=TP0... 33 9.8
>tr|B8LP25|B8LP25_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 202
Score = 152 bits (385), Expect = 1e-35 Identities = 69/98 (70%), Positives = 85/98 (86%) Frame = +2
Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487 S+ EALDFS VRS++DA LL+DAR AT G++MSREQYAALRRKIGGTY+DFFK +EVE Sbjct: 89 SITEALDFSEVRSEEDAVLLEDARDATKSGDRMSREQYAALRRKIGGTYQDFFKGYVEVE 148
Query: 488 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601 GE+V+EGWVDK+C+ CKKDT++E R VD GRYAH++C Sbjct: 149 GEYVEEGWVDKTCKICKKDTSNEPRNVDAMGRYAHVAC 186
>tr|A9RPH7|A9RPH7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_48718 PE=4 SV=1 Length = 128
Score = 146 bits (369), Expect = 8e-34 Identities = 67/98 (68%), Positives = 80/98 (81%) Frame = +2
Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487 S+ +ALDF+AVRS+ DA+LL DAR AT GEKMSREQY ALRRKIGGTY DFFK +EV+ Sbjct: 15 SLTDALDFAAVRSEKDAELLQDARQATKSGEKMSREQYGALRRKIGGTYGDFFKGYVEVD 74
Query: 488 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601 G +VDEGWVDK+C++CKKDT RT D GRYAH++C Sbjct: 75 GAYVDEGWVDKTCKYCKKDTKGAPRTKDSSGRYAHVAC 112
>tr|A7Q3U2|A7Q3U2_VITVI Chromosome chr13 scaffold_48, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029417001 PE=4 SV=1 Length = 176
Score = 145 bits (366), Expect = 2e-33 Identities = 66/98 (67%), Positives = 81/98 (82%) Frame = +2
Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487 SV EALDFS VRS +DAQLL+ AR AT G +MSREQY ALRRKIGGTY+DFFK ++V+ Sbjct: 63 SVTEALDFSQVRSVEDAQLLEKARDATQSGGRMSREQYGALRRKIGGTYKDFFKSYVDVD 122
Query: 488 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601 G++V+EGWVDK+C+ CK+DT E R VDKFGRY H++C Sbjct: 123 GQYVEEGWVDKTCKVCKEDTRGEPRQVDKFGRYVHVAC 160
>tr|A5ACL9|A5ACL9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043600 PE=4 SV=1 Length = 176
Score = 145 bits (366), Expect = 2e-33 Identities = 66/98 (67%), Positives = 81/98 (82%) Frame = +2
Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487 SV EALDFS VRS +DAQLL+ AR AT G +MSREQY ALRRKIGGTY+DFFK ++V+ Sbjct: 63 SVTEALDFSQVRSVEDAQLLEKARDATQSGGRMSREQYGALRRKIGGTYKDFFKSYVDVD 122
Query: 488 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601 G++V+EGWVDK+C+ CK+DT E R VDKFGRY H++C Sbjct: 123 GQYVEEGWVDKTCKVCKEDTRGEPRQVDKFGRYVHVAC 160
>tr|Q9LYL4|Q9LYL4_ARATH Putative uncharacterized protein F18O21_250 (Putative uncharacterized protein At3g56290) (Putative uncharacterized protein At3g56290; F18O21_250) OS=Arabidopsis thaliana GN=F18O21_250 PE=2 SV=1 Length = 173
Score = 145 bits (365), Expect = 2e-33 Identities = 65/95 (68%), Positives = 80/95 (84%) Frame = +2
Query: 317 EALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVEGEF 496 +ALDFS VRS+ DA+LL +AR AT G KM++EQY ALRRKIGGTY+DFFK +EV+G++ Sbjct: 63 DALDFSQVRSEKDAELLYEAREATKSGRKMTQEQYGALRRKIGGTYKDFFKSYVEVDGQY 122
Query: 497 VDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601 V+EGWVDK+C+ CKKDT EAR VDK GRYAH+SC Sbjct: 123 VEEGWVDKTCKICKKDTKGEARQVDKLGRYAHVSC 157
>tr|Q8LRD0|Q8LRD0_ORYSJ Putative uncharacterized protein P0031D02.18 (Putative uncharacterized protein) (Os01g0823600 protein) OS=Oryza sativa subsp. japonica GN=P0031D02.18 PE=4 SV=1 Length = 170
Score = 142 bits (359), Expect = 1e-32 Identities = 64/98 (65%), Positives = 81/98 (82%) Frame = +2
Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487 S+ EALDFS VRS+ DA+LL +AR AT G +M++EQY ALRRKIGGTY+DFFK ++V+ Sbjct: 57 SITEALDFSQVRSEKDAELLYEAREATKDGGRMTKEQYGALRRKIGGTYKDFFKSYVDVD 116
Query: 488 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601 GE+V+EGWVDK+C+ CKKDT E R VDK GRYAH++C Sbjct: 117 GEYVEEGWVDKTCKVCKKDTRGEPRQVDKLGRYAHVAC 154
>tr|B6SY86|B6SY86_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 162
Score = 142 bits (359), Expect = 1e-32 Identities = 64/98 (65%), Positives = 81/98 (82%) Frame = +2
Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487 S+ EALDFS VRS+ DA+LL +AR +T G +M+REQY ALRRKIGGTY+DFFK +EV+ Sbjct: 49 SITEALDFSQVRSEKDAELLYEARESTRGGGRMTREQYGALRRKIGGTYQDFFKSYVEVD 108
Query: 488 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601 G++V+EGWVDK+C+ CKKDT E R VDK GRYAH++C Sbjct: 109 GQYVEEGWVDKTCKICKKDTRGEPRQVDKLGRYAHVAC 146
>tr|B6SQ41|B6SQ41_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 162
Score = 142 bits (359), Expect = 1e-32 Identities = 64/98 (65%), Positives = 81/98 (82%) Frame = +2
Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487 S+ EALDFS VRS+ DA+LL +AR +T G +M+REQY ALRRKIGGTY+DFFK +EV+ Sbjct: 49 SITEALDFSQVRSEKDAELLYEARESTKGGGRMTREQYGALRRKIGGTYQDFFKSYVEVD 108
Query: 488 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601 G++V+EGWVDK+C+ CKKDT E R VDK GRYAH++C Sbjct: 109 GQYVEEGWVDKTCKICKKDTRGEPRQVDKLGRYAHVAC 146
>tr|A2WWH6|A2WWH6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04255 PE=4 SV=1 Length = 170
Score = 142 bits (359), Expect = 1e-32 Identities = 64/98 (65%), Positives = 81/98 (82%) Frame = +2
Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487 S+ EALDFS VRS+ DA+LL +AR AT G +M++EQY ALRRKIGGTY+DFFK ++V+ Sbjct: 57 SITEALDFSQVRSEKDAELLYEAREATKDGGRMTKEQYGALRRKIGGTYKDFFKSYVDVD 116
Query: 488 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISC 601 GE+V+EGWVDK+C+ CKKDT E R VDK GRYAH++C Sbjct: 117 GEYVEEGWVDKTCKVCKKDTRGEPRQVDKLGRYAHVAC 154
>tr|Q00SR8|Q00SR8_OSTTA Homology to unknown gene OS=Ostreococcus tauri GN=Ot18g00990 PE=4 SV=1 Length = 161
Score = 64.3 bits (155), Expect = 5e-09 Identities = 36/71 (50%), Positives = 47/71 (66%) Frame = +2
Query: 308 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 487 SV ALDF + D LL+ AR N G+KMS EQY ALRRK+GGT FF ++++V Sbjct: 61 SVARALDFQE-DIESDRGLLNAARRMRN-GDKMSTEQYGALRRKVGGTKGGFFGENVDVV 118
Query: 488 GEFVDEGWVDK 520 G + D+G+VDK Sbjct: 119 GAYTDKGYVDK 129
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