DK945747 |
Clone id |
YMU02A01NGRL0010_F04 |
Library |
YMU02 |
Length |
589 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_F04. 5' end sequence. |
Accession |
DK945747 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL3000Contig1 |
Sequence |
AGGAGAGCGAGAGATTGAGGAGAGGAGAGGGCGAGACAGAAAGAGAGCGCGCGCGAGAGA GAGATGCCGCCACCTCGCAGCAACAAGCGCAATGTGCCAGCCATTAAAGCATCAAGCGGA GACGATGGAATTATCAAGCGCATGAACAACGCCGTTCGCGAAACAGCCCAGTATGTGCAC TCCATCGCCTCAGGTTATGGAAAGAAGCTGCTATTGAGCACCGGCAAGGCGGCGTGGATT GCAGGTACTTCTGTCCTTGTGCTCGTTGTGCCCCTCATCATCGAGCTCGACCGAGATGCC CAACTCGCTGAGCTTGAAGGTCACCAGGCGACCTTGCTTGGTGCCCCTTCTCAGCCCCCT GGTGTGCTTAGATGAAACAAGGAGCAAAGCTAGATTCTGGTCAGTTTTTTGCTATGGATT ATTCTGCCTTCATGGGTGCTAGAGTGTCTTGTATAGTGGAGATACCCTAGAGCTATTACC ATAATAGTTTTATGCGAGATATGTATCTGTACATGAAATTTTTGCTCGTCCTCCGATAAA GTAATTAGCTTGCTGTCTGGTTGTGTTTTTTATGTGATGGTTGTAGTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FNC9 |
Definition |
sp|Q9FNC9|TO222_ARATH Mitochondrial import receptor subunit TOM22 homolog 2 OS=Arabidopsis thaliana |
Align length |
91 |
Score (bit) |
63.5 |
E-value |
7.0e-10 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2XTD5 |
Definition |
tr|Q2XTD5|Q2XTD5_SOLTU Putative uncharacterized protein OS=Solanum tuberosum |
Align length |
84 |
Score (bit) |
61.2 |
E-value |
4.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945747|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0010_F04, 5' (589 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q2XTD5|Q2XTD5_SOLTU Putative uncharacterized protein OS=Solan... 61 4e-08 tr|A7Q1L3|A7Q1L3_VITVI Chromosome chr7 scaffold_44, whole genome... 59 2e-07 tr|A7NXI2|A7NXI2_VITVI Chromosome chr5 scaffold_2, whole genome ... 57 1e-06 tr|B6T3V3|B6T3V3_MAIZE Mitochondrial import receptor subunit TOM... 56 1e-06 tr|B6U2X6|B6U2X6_MAIZE Mitochondrial import receptor subunit TOM... 56 2e-06 tr|A9PDF2|A9PDF2_POPTR Putative uncharacterized protein OS=Popul... 56 2e-06 tr|A5BV42|A5BV42_VITVI Putative uncharacterized protein OS=Vitis... 56 2e-06 tr|A9TZ24|A9TZ24_PHYPA Predicted protein (Fragment) OS=Physcomit... 55 2e-06 tr|A9RNF1|A9RNF1_PHYPA Predicted protein (Fragment) OS=Physcomit... 53 1e-05 tr|Q6K929|Q6K929_ORYSJ Os02g0496900 protein OS=Oryza sativa subs... 51 4e-05 tr|Q1H594|Q1H594_ARATH At1g04070 OS=Arabidopsis thaliana PE=4 SV=1 51 4e-05 tr|A2X511|A2X511_ORYSI Putative uncharacterized protein OS=Oryza... 51 4e-05 tr|Q6ZG87|Q6ZG87_ORYSJ Os02g0131600 protein OS=Oryza sativa subs... 45 0.004 tr|A3A2T7|A3A2T7_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.004 tr|A2X0J3|A2X0J3_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.004 tr|A4RU64|A4RU64_OSTLU Predicted protein OS=Ostreococcus lucimar... 39 0.17 tr|A4X4A9|A4X4A9_SALTO 3-isopropylmalate dehydrogenase OS=Salini... 35 3.2 tr|Q01CX3|Q01CX3_OSTTA Translocase of outer mitochondrial membra... 35 3.2
>tr|Q2XTD5|Q2XTD5_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=4 SV=1 Length = 103
Score = 61.2 bits (147), Expect = 4e-08 Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 5/84 (5%) Frame = +1
Query: 124 DGIIKRMNNAVRET-----AQYVHSIASGYGKKLLLSTGKAAWIAGTSXXXXXXXXXXXX 288 DGII R ++++ E+ + S + KKL STGKAAWIAGT+ Sbjct: 18 DGIISRFSSSISESPIVYQGKRAASDVAFVAKKLFKSTGKAAWIAGTTFLILVVPLIIEM 77
Query: 289 DRDAQLAELEGHQATLLGAPSQPP 360 DRDAQ ELE QA+LLGAP PP Sbjct: 78 DRDAQFTELEMQQASLLGAP--PP 99
>tr|A7Q1L3|A7Q1L3_VITVI Chromosome chr7 scaffold_44, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028513001 PE=4 SV=1 Length = 147
Score = 59.3 bits (142), Expect = 2e-07 Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Frame = +1
Query: 121 DDGIIKRMNNAVRET-----AQYVHSIASGYGKKLLLSTGKAAWIAGTSXXXXXXXXXXX 285 ++GI+ R++N++ ++ + S A+ KKL STGKAAWIAGT+ Sbjct: 64 NEGILSRVSNSISQSPILFQGRQAASDAAVVAKKLFKSTGKAAWIAGTTFLILVVPLIIE 123
Query: 286 XDRDAQLAELEGHQATLLGAPSQ 354 DR+ Q+ ELE QA+LLG P+Q Sbjct: 124 MDREQQMNELEMQQASLLGTPAQ 146
>tr|A7NXI2|A7NXI2_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020345001 PE=4 SV=1 Length = 97
Score = 56.6 bits (135), Expect = 1e-06 Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 5/87 (5%) Frame = +1
Query: 112 SSGDDGIIKRMNNAVRETAQYVH-----SIASGYGKKLLLSTGKAAWIAGTSXXXXXXXX 276 S + G++ R++N++ + H S A+ KKLL STGKAAWIAGT+ Sbjct: 8 SKSNSGLVSRISNSISGSGIMFHGKRAASDAAYVTKKLLRSTGKAAWIAGTTFVILVVPL 67
Query: 277 XXXXDRDAQLAELEGHQATLLGAPSQP 357 DR+ QL +L+ QATLLG P Sbjct: 68 IIEMDREQQLNDLDLQQATLLGTTPLP 94
>tr|B6T3V3|B6T3V3_MAIZE Mitochondrial import receptor subunit TOM22 OS=Zea mays PE=4 SV=1 Length = 94
Score = 56.2 bits (134), Expect = 1e-06 Identities = 37/99 (37%), Positives = 50/99 (50%) Frame = +1
Query: 64 MPPPRSNKRNVPAIKASSGDDGIIKRMNNAVRETAQYVHSIASGYGKKLLLSTGKAAWIA 243 MP P + + + G DGI+ ++ + + A + A+ KKLL STGKAAWIA Sbjct: 1 MPTPSALSK-----RGGDGGDGILAALSRS--QVAAHGRE-AAAVAKKLLRSTGKAAWIA 52
Query: 244 GTSXXXXXXXXXXXXDRDAQLAELEGHQATLLGAPSQPP 360 GT+ DR+ QL +LE Q TLLG PP Sbjct: 53 GTTFLVLVVPLIIEMDREQQLNDLELQQQTLLGGAPPPP 91
>tr|B6U2X6|B6U2X6_MAIZE Mitochondrial import receptor subunit TOM22 OS=Zea mays PE=4 SV=1 Length = 95
Score = 55.8 bits (133), Expect = 2e-06 Identities = 34/85 (40%), Positives = 45/85 (52%) Frame = +1
Query: 106 KASSGDDGIIKRMNNAVRETAQYVHSIASGYGKKLLLSTGKAAWIAGTSXXXXXXXXXXX 285 + G DGI+ ++ + + A + A+ KKLL STGKAAWIAGT+ Sbjct: 10 RGGDGGDGILAALSRS--QVAAHGRE-AAAVAKKLLRSTGKAAWIAGTTFLVLVVPLIIE 66
Query: 286 XDRDAQLAELEGHQATLLGAPSQPP 360 DR+ QL +LE Q TLLG PP Sbjct: 67 MDREQQLNDLELQQQTLLGGAPPPP 91
>tr|A9PDF2|A9PDF2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 106
Score = 55.8 bits (133), Expect = 2e-06 Identities = 37/99 (37%), Positives = 47/99 (47%) Frame = +1
Query: 64 MPPPRSNKRNVPAIKASSGDDGIIKRMNNAVRETAQYVHSIASGYGKKLLLSTGKAAWIA 243 +P R + + P I A + I+ + A + A KKLL STGKAAWIA Sbjct: 12 LPDRRGSSKQEPNILAKINNTQIVSKGKQAASD--------ALFVAKKLLKSTGKAAWIA 63
Query: 244 GTSXXXXXXXXXXXXDRDAQLAELEGHQATLLGAPSQPP 360 GT+ DR+ QL ELE Q +LLGAP P Sbjct: 64 GTTFLILAVPLIIEMDREQQLNELELQQQSLLGAPPVGP 102
>tr|A5BV42|A5BV42_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006999 PE=4 SV=1 Length = 95
Score = 55.8 bits (133), Expect = 2e-06 Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 5/80 (6%) Frame = +1
Query: 130 IIKRMNNAVRET-----AQYVHSIASGYGKKLLLSTGKAAWIAGTSXXXXXXXXXXXXDR 294 I+ R++N++ ++ + S A+ KKL STGKAAWIAGT+ DR Sbjct: 15 ILSRVSNSISQSPILFQGRQAASDAAVVAKKLFKSTGKAAWIAGTTFLILVVPLIIEMDR 74
Query: 295 DAQLAELEGHQATLLGAPSQ 354 + Q+ ELE QA+LLG P+Q Sbjct: 75 EQQMNELEMQQASLLGTPAQ 94
>tr|A9TZ24|A9TZ24_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_9452 PE=4 SV=1 Length = 87
Score = 55.5 bits (132), Expect = 2e-06 Identities = 29/69 (42%), Positives = 40/69 (57%) Frame = +1
Query: 151 AVRETAQYVHSIASGYGKKLLLSTGKAAWIAGTSXXXXXXXXXXXXDRDAQLAELEGHQA 330 ++ + A+ S S + +KLL STGKAAWIAGT+ DR+ Q+ ++E QA Sbjct: 19 SLADKARRAASNTSRFSQKLLWSTGKAAWIAGTTFLILVVPLIIEMDREQQMVDMESQQA 78
Query: 331 TLLGAPSQP 357 LLGAP P Sbjct: 79 GLLGAPPLP 87
>tr|A9RNF1|A9RNF1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_29444 PE=4 SV=1 Length = 84
Score = 52.8 bits (125), Expect = 1e-05 Identities = 27/66 (40%), Positives = 39/66 (59%) Frame = +1
Query: 151 AVRETAQYVHSIASGYGKKLLLSTGKAAWIAGTSXXXXXXXXXXXXDRDAQLAELEGHQA 330 ++ + A+ S + + +KLL STGKAAWIAGT+ DR+ Q+ ++E QA Sbjct: 17 SLTDKARRAASNTARFSQKLLWSTGKAAWIAGTTFLILVVPLIIEMDREQQMVDMESQQA 76
Query: 331 TLLGAP 348 LLGAP Sbjct: 77 GLLGAP 82
>tr|Q6K929|Q6K929_ORYSJ Os02g0496900 protein OS=Oryza sativa subsp. japonica GN=OJ1288_D09.11 PE=4 SV=1 Length = 93
Score = 51.2 bits (121), Expect = 4e-05 Identities = 28/57 (49%), Positives = 32/57 (56%) Frame = +1
Query: 187 ASGYGKKLLLSTGKAAWIAGTSXXXXXXXXXXXXDRDAQLAELEGHQATLLGAPSQP 357 A+ KKLL STGKAAWIAGT+ DR+ QL +LE Q LLG P P Sbjct: 33 AATMAKKLLRSTGKAAWIAGTTFLVLVVPLIIEMDREQQLNDLELQQQALLGGPPPP 89
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