DK945747
Clone id YMU02A01NGRL0010_F04
Library
Length 589
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_F04. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
AGGAGAGCGAGAGATTGAGGAGAGGAGAGGGCGAGACAGAAAGAGAGCGCGCGCGAGAGA
GAGATGCCGCCACCTCGCAGCAACAAGCGCAATGTGCCAGCCATTAAAGCATCAAGCGGA
GACGATGGAATTATCAAGCGCATGAACAACGCCGTTCGCGAAACAGCCCAGTATGTGCAC
TCCATCGCCTCAGGTTATGGAAAGAAGCTGCTATTGAGCACCGGCAAGGCGGCGTGGATT
GCAGGTACTTCTGTCCTTGTGCTCGTTGTGCCCCTCATCATCGAGCTCGACCGAGATGCC
CAACTCGCTGAGCTTGAAGGTCACCAGGCGACCTTGCTTGGTGCCCCTTCTCAGCCCCCT
GGTGTGCTTAGATGAAACAAGGAGCAAAGCTAGATTCTGGTCAGTTTTTTGCTATGGATT
ATTCTGCCTTCATGGGTGCTAGAGTGTCTTGTATAGTGGAGATACCCTAGAGCTATTACC
ATAATAGTTTTATGCGAGATATGTATCTGTACATGAAATTTTTGCTCGTCCTCCGATAAA
GTAATTAGCTTGCTGTCTGGTTGTGTTTTTTATGTGATGGTTGTAGTTG
■■Homology search results ■■ -
sp_hit_id Q9FNC9
Definition sp|Q9FNC9|TO222_ARATH Mitochondrial import receptor subunit TOM22 homolog 2 OS=Arabidopsis thaliana
Align length 91
Score (bit) 63.5
E-value 7.0e-10
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945747|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_F04, 5'
(589 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9FNC9|TO222_ARATH Mitochondrial import receptor subunit TOM2... 64 7e-10
sp|O64497|TO221_ARATH Mitochondrial import receptor subunit TOM2... 51 4e-06
sp|P24802|PLOD1_CHICK Procollagen-lysine,2-oxoglutarate 5-dioxyg... 33 1.1
sp|Q6NP60|MOX12_DROME MOXD1 homolog 2 OS=Drosophila melanogaster... 32 1.8
sp|A4TE12|LEU3_MYCGI 3-isopropylmalate dehydrogenase OS=Mycobact... 31 4.0

>sp|Q9FNC9|TO222_ARATH Mitochondrial import receptor subunit TOM22
homolog 2 OS=Arabidopsis thaliana GN=TOM22-2 PE=1 SV=3
Length = 99

Score = 63.5 bits (153), Expect = 7e-10
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +1

Query: 88 RNVPAIKASSGDDGIIKRMNNA-VRETAQYVHSIASGYGKKLLLSTGKAAWIAGTSXXXX 264
+ + A K+ GD I+ R++N+ + + A KKLL STGKAAWIAGT+
Sbjct: 4 KRIGAGKSGGGDPNILARISNSEIVSQGRRAAGDAVEVSKKLLRSTGKAAWIAGTTFLIL 63

Query: 265 XXXXXXXXDRDAQLAELEGHQATLLGAPSQP 357
DR+AQ+ E+E QA+LLGAP P
Sbjct: 64 VVPLIIEMDREAQINEIELQQASLLGAPPSP 94


>sp|O64497|TO221_ARATH Mitochondrial import receptor subunit TOM22
homolog 1 OS=Arabidopsis thaliana GN=TOM22-1 PE=2 SV=1
Length = 94

Score = 51.2 bits (121), Expect = 4e-06
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1

Query: 103 IKASSGDDGIIKRMNNA-VRETAQYVHSIASGYGKKLLLSTGKAAWIAGTSXXXXXXXXX 279
I A GD I+ +++N + + A KKLL STGKAAWIAGT+
Sbjct: 6 IGAGKGDSSILAKISNYDIVSQGRRAACDAVYVSKKLLKSTGKAAWIAGTTFLILAVPLI 65

Query: 280 XXXDRDAQLAELEGHQATLLGAP 348
++D +L E++ QA+LLG P
Sbjct: 66 LELEQDHRLGEIDFEQASLLGTP 88


>sp|P24802|PLOD1_CHICK Procollagen-lysine,2-oxoglutarate
5-dioxygenase 1 OS=Gallus gallus GN=PLOD1 PE=1 SV=1
Length = 730

Score = 33.1 bits (74), Expect = 1.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -2

Query: 408 KTDQNLALLLVSSKHTRGLRRGTKQGRLVTFKLSELGISVE 286
K ++NL +L V++K T G RR + + +K+ LG+ E
Sbjct: 25 KQEENLLVLTVATKQTEGFRRFRRSAQFFNYKIQVLGLDEE 65


>sp|Q6NP60|MOX12_DROME MOXD1 homolog 2 OS=Drosophila melanogaster
GN=olf413 PE=1 SV=1
Length = 760

Score = 32.3 bits (72), Expect = 1.8
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1

Query: 55 EREMPPPRSNKRNVPAIKASSGDDGIIKRMNNAVRETAQYVHSIASGYGK---KLLLSTG 225
ER PPP S+ +P + ++ II+ + R +A VHS++ G G+ LL G
Sbjct: 690 ERTAPPPASDLSELPVLHELDNNN-IIEGAARSSRSSATDVHSLSRGSGRHFISCLLWLG 748

Query: 226 KAAW 237
++W
Sbjct: 749 ASSW 752


>sp|A4TE12|LEU3_MYCGI 3-isopropylmalate dehydrogenase
OS=Mycobacterium gilvum (strain PYR-GCK) GN=leuB PE=3
SV=1
Length = 336

Score = 31.2 bits (69), Expect = 4.0
Identities = 17/28 (60%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
Frame = +1

Query: 295 DAQLAELEGHQATLLGA---PSQPPGVL 369
D+ L EL+GH A LLGA PS P GVL
Sbjct: 51 DSVLDELKGHDAILLGAIGDPSMPSGVL 78


tr_hit_id Q2XTD5
Definition tr|Q2XTD5|Q2XTD5_SOLTU Putative uncharacterized protein OS=Solanum tuberosum
Align length 84
Score (bit) 61.2
E-value 4.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945747|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_F04, 5'
(589 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2XTD5|Q2XTD5_SOLTU Putative uncharacterized protein OS=Solan... 61 4e-08
tr|A7Q1L3|A7Q1L3_VITVI Chromosome chr7 scaffold_44, whole genome... 59 2e-07
tr|A7NXI2|A7NXI2_VITVI Chromosome chr5 scaffold_2, whole genome ... 57 1e-06
tr|B6T3V3|B6T3V3_MAIZE Mitochondrial import receptor subunit TOM... 56 1e-06
tr|B6U2X6|B6U2X6_MAIZE Mitochondrial import receptor subunit TOM... 56 2e-06
tr|A9PDF2|A9PDF2_POPTR Putative uncharacterized protein OS=Popul... 56 2e-06
tr|A5BV42|A5BV42_VITVI Putative uncharacterized protein OS=Vitis... 56 2e-06
tr|A9TZ24|A9TZ24_PHYPA Predicted protein (Fragment) OS=Physcomit... 55 2e-06
tr|A9RNF1|A9RNF1_PHYPA Predicted protein (Fragment) OS=Physcomit... 53 1e-05
tr|Q6K929|Q6K929_ORYSJ Os02g0496900 protein OS=Oryza sativa subs... 51 4e-05
tr|Q1H594|Q1H594_ARATH At1g04070 OS=Arabidopsis thaliana PE=4 SV=1 51 4e-05
tr|A2X511|A2X511_ORYSI Putative uncharacterized protein OS=Oryza... 51 4e-05
tr|Q6ZG87|Q6ZG87_ORYSJ Os02g0131600 protein OS=Oryza sativa subs... 45 0.004
tr|A3A2T7|A3A2T7_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.004
tr|A2X0J3|A2X0J3_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.004
tr|A4RU64|A4RU64_OSTLU Predicted protein OS=Ostreococcus lucimar... 39 0.17
tr|A4X4A9|A4X4A9_SALTO 3-isopropylmalate dehydrogenase OS=Salini... 35 3.2
tr|Q01CX3|Q01CX3_OSTTA Translocase of outer mitochondrial membra... 35 3.2

>tr|Q2XTD5|Q2XTD5_SOLTU Putative uncharacterized protein OS=Solanum
tuberosum PE=4 SV=1
Length = 103

Score = 61.2 bits (147), Expect = 4e-08
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Frame = +1

Query: 124 DGIIKRMNNAVRET-----AQYVHSIASGYGKKLLLSTGKAAWIAGTSXXXXXXXXXXXX 288
DGII R ++++ E+ + S + KKL STGKAAWIAGT+
Sbjct: 18 DGIISRFSSSISESPIVYQGKRAASDVAFVAKKLFKSTGKAAWIAGTTFLILVVPLIIEM 77

Query: 289 DRDAQLAELEGHQATLLGAPSQPP 360
DRDAQ ELE QA+LLGAP PP
Sbjct: 78 DRDAQFTELEMQQASLLGAP--PP 99


>tr|A7Q1L3|A7Q1L3_VITVI Chromosome chr7 scaffold_44, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00028513001
PE=4 SV=1
Length = 147

Score = 59.3 bits (142), Expect = 2e-07
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Frame = +1

Query: 121 DDGIIKRMNNAVRET-----AQYVHSIASGYGKKLLLSTGKAAWIAGTSXXXXXXXXXXX 285
++GI+ R++N++ ++ + S A+ KKL STGKAAWIAGT+
Sbjct: 64 NEGILSRVSNSISQSPILFQGRQAASDAAVVAKKLFKSTGKAAWIAGTTFLILVVPLIIE 123

Query: 286 XDRDAQLAELEGHQATLLGAPSQ 354
DR+ Q+ ELE QA+LLG P+Q
Sbjct: 124 MDREQQMNELEMQQASLLGTPAQ 146


>tr|A7NXI2|A7NXI2_VITVI Chromosome chr5 scaffold_2, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00020345001
PE=4 SV=1
Length = 97

Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Frame = +1

Query: 112 SSGDDGIIKRMNNAVRETAQYVH-----SIASGYGKKLLLSTGKAAWIAGTSXXXXXXXX 276
S + G++ R++N++ + H S A+ KKLL STGKAAWIAGT+
Sbjct: 8 SKSNSGLVSRISNSISGSGIMFHGKRAASDAAYVTKKLLRSTGKAAWIAGTTFVILVVPL 67

Query: 277 XXXXDRDAQLAELEGHQATLLGAPSQP 357
DR+ QL +L+ QATLLG P
Sbjct: 68 IIEMDREQQLNDLDLQQATLLGTTPLP 94


>tr|B6T3V3|B6T3V3_MAIZE Mitochondrial import receptor subunit TOM22
OS=Zea mays PE=4 SV=1
Length = 94

Score = 56.2 bits (134), Expect = 1e-06
Identities = 37/99 (37%), Positives = 50/99 (50%)
Frame = +1

Query: 64 MPPPRSNKRNVPAIKASSGDDGIIKRMNNAVRETAQYVHSIASGYGKKLLLSTGKAAWIA 243
MP P + + + G DGI+ ++ + + A + A+ KKLL STGKAAWIA
Sbjct: 1 MPTPSALSK-----RGGDGGDGILAALSRS--QVAAHGRE-AAAVAKKLLRSTGKAAWIA 52

Query: 244 GTSXXXXXXXXXXXXDRDAQLAELEGHQATLLGAPSQPP 360
GT+ DR+ QL +LE Q TLLG PP
Sbjct: 53 GTTFLVLVVPLIIEMDREQQLNDLELQQQTLLGGAPPPP 91


>tr|B6U2X6|B6U2X6_MAIZE Mitochondrial import receptor subunit TOM22
OS=Zea mays PE=4 SV=1
Length = 95

Score = 55.8 bits (133), Expect = 2e-06
Identities = 34/85 (40%), Positives = 45/85 (52%)
Frame = +1

Query: 106 KASSGDDGIIKRMNNAVRETAQYVHSIASGYGKKLLLSTGKAAWIAGTSXXXXXXXXXXX 285
+ G DGI+ ++ + + A + A+ KKLL STGKAAWIAGT+
Sbjct: 10 RGGDGGDGILAALSRS--QVAAHGRE-AAAVAKKLLRSTGKAAWIAGTTFLVLVVPLIIE 66

Query: 286 XDRDAQLAELEGHQATLLGAPSQPP 360
DR+ QL +LE Q TLLG PP
Sbjct: 67 MDREQQLNDLELQQQTLLGGAPPPP 91


>tr|A9PDF2|A9PDF2_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 106

Score = 55.8 bits (133), Expect = 2e-06
Identities = 37/99 (37%), Positives = 47/99 (47%)
Frame = +1

Query: 64 MPPPRSNKRNVPAIKASSGDDGIIKRMNNAVRETAQYVHSIASGYGKKLLLSTGKAAWIA 243
+P R + + P I A + I+ + A + A KKLL STGKAAWIA
Sbjct: 12 LPDRRGSSKQEPNILAKINNTQIVSKGKQAASD--------ALFVAKKLLKSTGKAAWIA 63

Query: 244 GTSXXXXXXXXXXXXDRDAQLAELEGHQATLLGAPSQPP 360
GT+ DR+ QL ELE Q +LLGAP P
Sbjct: 64 GTTFLILAVPLIIEMDREQQLNELELQQQSLLGAPPVGP 102


>tr|A5BV42|A5BV42_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_006999 PE=4 SV=1
Length = 95

Score = 55.8 bits (133), Expect = 2e-06
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Frame = +1

Query: 130 IIKRMNNAVRET-----AQYVHSIASGYGKKLLLSTGKAAWIAGTSXXXXXXXXXXXXDR 294
I+ R++N++ ++ + S A+ KKL STGKAAWIAGT+ DR
Sbjct: 15 ILSRVSNSISQSPILFQGRQAASDAAVVAKKLFKSTGKAAWIAGTTFLILVVPLIIEMDR 74

Query: 295 DAQLAELEGHQATLLGAPSQ 354
+ Q+ ELE QA+LLG P+Q
Sbjct: 75 EQQMNELEMQQASLLGTPAQ 94


>tr|A9TZ24|A9TZ24_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_9452 PE=4 SV=1
Length = 87

Score = 55.5 bits (132), Expect = 2e-06
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = +1

Query: 151 AVRETAQYVHSIASGYGKKLLLSTGKAAWIAGTSXXXXXXXXXXXXDRDAQLAELEGHQA 330
++ + A+ S S + +KLL STGKAAWIAGT+ DR+ Q+ ++E QA
Sbjct: 19 SLADKARRAASNTSRFSQKLLWSTGKAAWIAGTTFLILVVPLIIEMDREQQMVDMESQQA 78

Query: 331 TLLGAPSQP 357
LLGAP P
Sbjct: 79 GLLGAPPLP 87


>tr|A9RNF1|A9RNF1_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_29444 PE=4 SV=1
Length = 84

Score = 52.8 bits (125), Expect = 1e-05
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +1

Query: 151 AVRETAQYVHSIASGYGKKLLLSTGKAAWIAGTSXXXXXXXXXXXXDRDAQLAELEGHQA 330
++ + A+ S + + +KLL STGKAAWIAGT+ DR+ Q+ ++E QA
Sbjct: 17 SLTDKARRAASNTARFSQKLLWSTGKAAWIAGTTFLILVVPLIIEMDREQQMVDMESQQA 76

Query: 331 TLLGAP 348
LLGAP
Sbjct: 77 GLLGAP 82


>tr|Q6K929|Q6K929_ORYSJ Os02g0496900 protein OS=Oryza sativa subsp.
japonica GN=OJ1288_D09.11 PE=4 SV=1
Length = 93

Score = 51.2 bits (121), Expect = 4e-05
Identities = 28/57 (49%), Positives = 32/57 (56%)
Frame = +1

Query: 187 ASGYGKKLLLSTGKAAWIAGTSXXXXXXXXXXXXDRDAQLAELEGHQATLLGAPSQP 357
A+ KKLL STGKAAWIAGT+ DR+ QL +LE Q LLG P P
Sbjct: 33 AATMAKKLLRSTGKAAWIAGTTFLVLVVPLIIEMDREQQLNDLELQQQALLGGPPPP 89