BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945754|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_F12, 5'
         (280 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5ZKH6|HDAC9_CHICK Histone deacetylase 9 OS=Gallus gallus GN=...    31   2.2  
sp|Q9Z896|PMP13_CHLPN Probable outer membrane protein pmp13 OS=C...    30   2.9  
sp|A1CEK6|HSE1_ASPCL Class E vacuolar protein-sorting machinery ...    30   3.7  
sp|Q6L1B5|RS4E_PICTO 30S ribosomal protein S4e OS=Picrophilus to...    29   8.3  

>sp|Q5ZKH6|HDAC9_CHICK Histone deacetylase 9 OS=Gallus gallus
           GN=hdac9 PE=2 SV=1
          Length = 594

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 18/58 (31%), Positives = 36/58 (62%)
 Frame = +1

Query: 7   PVAALSEGEAQDIAFTLYQAAIKDLKGRLCLSDDAIDLLSVHT*PSMINVISLLIAMQ 180
           P ++++E E   +  ++ QA     + RL + D++++LLS++T PS+ N+   L A+Q
Sbjct: 285 PTSSITESETSVLPSSI-QAEHLVSQQRLLIQDESVNLLSLYTSPSLPNITLGLPAVQ 341


>sp|Q9Z896|PMP13_CHLPN Probable outer membrane protein pmp13
           OS=Chlamydia pneumoniae GN=pmp13 PE=2 SV=1
          Length = 973

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -3

Query: 194 RNTNGCMAINNEMTFIIDGQVCTDRRSMASSDKQRRPLRSLMA 66
           ++TNG + I+  +  + + Q C D   M + D Q+ P+  L A
Sbjct: 567 QSTNGALTISGTLGLVKNSQDCCDNHGMFNKDLQQVPILELKA 609


>sp|A1CEK6|HSE1_ASPCL Class E vacuolar protein-sorting machinery
           protein hse1 OS=Aspergillus clavatus GN=hse1 PE=3 SV=1
          Length = 599

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +3

Query: 3   PPRCRALRGGSPGYRFHSLPGCHQRPQGAPLLIRRRH---RPSIRTYL 137
           PP+ +  R G P Y + +  G H  PQGAP    +R+   RP  +T++
Sbjct: 372 PPQPQYARPGQPPYGYPAPTGPHGYPQGAPQPDPQRYFSPRPQDQTHM 419


>sp|Q6L1B5|RS4E_PICTO 30S ribosomal protein S4e OS=Picrophilus
           torridus GN=rps4e PE=3 SV=1
          Length = 234

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +3

Query: 6   PRCRALRGGSPGYRFHSLPGCHQRPQGAPLLIRRRHRPSIRTYLTIDDK 152
           PR   +   S  +  +SLPG H++    PLLI      ++R YL + DK
Sbjct: 11  PRKLKIARKSRFWAVNSLPGSHKKDSSIPLLI------ALRDYLKLGDK 53

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945754|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_F12, 5'
         (280 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B5HET2|B5HET2_STRPR Predicted protein OS=Streptomyces pristin...    33   5.5  

>tr|B5HET2|B5HET2_STRPR Predicted protein OS=Streptomyces
           pristinaespiralis ATCC 25486 GN=SSDG_03729 PE=4 SV=1
          Length = 1190

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 18/38 (47%), Positives = 20/38 (52%)
 Frame = +3

Query: 6   PRCRALRGGSPGYRFHSLPGCHQRPQGAPLLIRRRHRP 119
           P CR  R G  G R  +L  C QRP+G    IRRR  P
Sbjct: 57  PECRCWRLGWVGARHKNLRVCRQRPRGRAGPIRRRRWP 94