DK945755
Clone id YMU02A01NGRL0010_F13
Library
Length 232
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_F13. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
TAGCAAAGTCAGGGTCCAAGAAGCGCACAAAGTCTGGTAGAAAGGCCAGTCGCACATGAG
GAAAAGTTTTGTAATGGACTGCGGATTTTGATACTGAACCTTACAATTGTATGCAGCAAA
GTGGGTCATGATTTTACATTTACGAGGGAGGTAAGTTTGCTTAAAATTTTGAGTGTAGTC
ACTTTCTCACCCGAGTGTCATTCTTCATTAAGTGATTTTCTGGTTTTACTCC
■■Homology search results ■■ -
sp_hit_id Q5UQU4
Definition sp|Q5UQU4|YR348_MIMIV Uncharacterized protein R348 OS=Acanthamoeba polyphaga mimivirus
Align length 48
Score (bit) 28.9
E-value 8.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945755|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_F13, 5'
(232 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5UQU4|YR348_MIMIV Uncharacterized protein R348 OS=Acanthamoe... 29 8.4

>sp|Q5UQU4|YR348_MIMIV Uncharacterized protein R348 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_R348 PE=4 SV=1
Length = 705

Score = 28.9 bits (63), Expect = 8.4
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -2

Query: 198 TLG*ESDYTQNFKQTYLPRKCKIMTHFAAYNCKVQYQ-NPQSITKLFL 58
T+ ESDYT YL +K K ++ YN +QY+ NPQ++ +L L
Sbjct: 460 TMSKESDYT------YLLKKFKSASYNIYYNQWIQYKNNPQTLVELGL 501


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945755|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_F13, 5'
(232 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******