DK945757 |
Clone id |
YMU02A01NGRL0010_F15 |
Library |
YMU02 |
Length |
508 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_F15. 5' end sequence. |
Accession |
DK945757 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
GCAGGCAAGACAACTCTTCTGCACATGCTGAAGGATGCCTGGTTGGTTCAACATCATCCA ACACAGTATCCCACTTCGGAGGAATTGAGTATTGGGAAAATCAAGTTCAAGGCTTTTGAC TTGCGCGGCCATCAAATAGCTCGTCGTGTTTGGAAAGATTATTATGCCAAGGTTGATGGT ATTGTTTATCTGGTTGATGCTGCTGACAAAGAGAGATTTGCGGAATCCAAGAAAGAACTC GATGGGCTTCTCTCACACGACTCTTTAGCTCAGGTACCCTTTTTGATTTTGGGAAACAAG ATAGACATACCTATCGCAGCGTCAGAGGATGAATTGAGATACTATTTGGGGCTTTCCAGT TATACCACAGGAAAAGGGAAGGTGAATCTTACAGACTCGAACATCCGGCCAATTGAAGTT TTCATGTGCAGCATTGTTCGGAAGATGGGCTATGGTGATGGTTTTAAGTGGTTATCTCAA TACATCAAGTGATGTTGCTGCTGCTGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O04834 |
Definition |
sp|O04834|SAR1A_ARATH GTP-binding protein SAR1A OS=Arabidopsis thaliana |
Align length |
163 |
Score (bit) |
293.0 |
E-value |
4.0e-79 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T8D1 |
Definition |
tr|A9T8D1|A9T8D1_PHYPA Sar1-family small GTPase OS=Physcomitrella patens subsp. patens |
Align length |
163 |
Score (bit) |
295.0 |
E-value |
8.0e-79 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945757|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0010_F15, 5' (495 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T8D1|A9T8D1_PHYPA Sar1-family small GTPase OS=Physcomitrell... 295 8e-79 tr|A9NLN7|A9NLN7_PICSI Putative uncharacterized protein OS=Picea... 295 8e-79 tr|Q9SDK4|Q9SDK4_ORYSJ cDNA clone:001-008-G03, full insert seque... 293 3e-78 tr|B8ABU1|B8ABU1_ORYSI Putative uncharacterized protein OS=Oryza... 293 3e-78 tr|B7ZZP2|B7ZZP2_MAIZE Putative uncharacterized protein OS=Zea m... 291 1e-77 tr|B6TG58|B6TG58_MAIZE GTP-binding protein SAR1A OS=Zea mays PE=... 291 1e-77 tr|B4FPT6|B4FPT6_MAIZE GTP-binding protein SAR1A OS=Zea mays PE=... 291 2e-77 tr|A9RG76|A9RG76_PHYPA Sar1-family small GTPase OS=Physcomitrell... 290 3e-77 tr|A9NLN4|A9NLN4_PICSI Putative uncharacterized protein OS=Picea... 290 3e-77 tr|Q6PLR8|Q6PLR8_MAIZE Putative ras-like small GTP binding ptote... 289 4e-77 tr|Q38M59|Q38M59_SOLTU NtSar1 protein-like OS=Solanum tuberosum ... 289 6e-77 tr|O81695|O81695_AVEFA Ras-like small monomeric GTP-binding prot... 289 6e-77 tr|B7FMA7|B7FMA7_MEDTR Putative uncharacterized protein OS=Medic... 289 6e-77 tr|B2ZGG7|B2ZGG7_WHEAT GTPase SAR1 OS=Triticum aestivum GN=Sar1.... 289 6e-77 tr|B2ZGG5|B2ZGG5_WHEAT GTPase SAR1 OS=Triticum aestivum GN=Sar1.... 289 6e-77 tr|A7Q8N0|A7Q8N0_VITVI Chromosome chr5 scaffold_64, whole genome... 288 8e-77 tr|A2ZLM3|A2ZLM3_ORYSI Putative uncharacterized protein OS=Oryza... 288 1e-76 tr|Q93W16|Q93W16_ORYSJ cDNA clone:006-210-H07, full insert seque... 287 2e-76 tr|A2WPH1|A2WPH1_ORYSI Putative uncharacterized protein OS=Oryza... 287 2e-76 tr|Q9SDQ5|Q9SDQ5_TOBAC Small GTP-binding protein Sar1BNt OS=Nico... 287 2e-76 tr|A9PD96|A9PD96_POPTR Putative uncharacterized protein OS=Popul... 287 2e-76 tr|Q2QNM5|Q2QNM5_ORYSJ Os12g0560300 protein OS=Oryza sativa subs... 286 3e-76 tr|Q3HRY1|Q3HRY1_SOLTU Small GTP-binding protein Sar1BNt-like pr... 286 5e-76 tr|B2ZGG4|B2ZGG4_WHEAT GTPase SAR1 OS=Triticum aestivum GN=Sar1.... 286 5e-76 tr|Q8VYP7|Q8VYP7_ARATH Putative Sar1 GTP binding protein (Sar1-l... 285 8e-76 tr|O24110|O24110_NICPL Small GTP-binding protein OS=Nicotiana pl... 285 8e-76 tr|O24138|O24138_TOBAC NtSar1 protein OS=Nicotiana tabacum GN=Nt... 285 1e-75 tr|A9PIL8|A9PIL8_POPJC Putative uncharacterized protein OS=Popul... 282 5e-75 tr|O65007|O65007_MALDO GTP-binding protein Sar1 OS=Malus domesti... 282 7e-75 tr|Q307Y7|Q307Y7_SOLTU GTPase-like OS=Solanum tuberosum PE=2 SV=1 278 8e-74
>tr|A9T8D1|A9T8D1_PHYPA Sar1-family small GTPase OS=Physcomitrella patens subsp. patens GN=Sar13 PE=3 SV=1 Length = 193
Score = 295 bits (755), Expect = 8e-79 Identities = 146/163 (89%), Positives = 151/163 (92%) Frame = +1
Query: 1 AGKTTLLHMLKDAWLVQHHPTQYPTSEELSIGKIKFKAFDLRGHQIARRVWKDYYAKVDG 180 AGKTTLLHMLKD L QH PTQYPTSEELSIGKIKFKAFDL GHQIARRVWKDYYAKVDG Sbjct: 31 AGKTTLLHMLKDERLAQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDG 90
Query: 181 IVYLVDAADKERFAESKKELDGLLSHDSLAQVPFLILGNKIDIPIAASEDELRYYLGLSS 360 IVYLVDAADKERF+ESKKELD LLS DSL QVPFL+LGNKIDIP AASEDELRY LGLS+ Sbjct: 91 IVYLVDAADKERFSESKKELDALLSDDSLGQVPFLVLGNKIDIPYAASEDELRYSLGLSN 150
Query: 361 YTTGKGKVNLTDSNIRPIEVFMCSIVRKMGYGDGFKWLSQYIK 489 YTTGKGKVNL DSNIRPIEVFMCSIVRKMGYG+G KW+SQYIK Sbjct: 151 YTTGKGKVNLGDSNIRPIEVFMCSIVRKMGYGEGIKWMSQYIK 193
>tr|A9NLN7|A9NLN7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 193
Score = 295 bits (755), Expect = 8e-79 Identities = 146/163 (89%), Positives = 150/163 (92%) Frame = +1
Query: 1 AGKTTLLHMLKDAWLVQHHPTQYPTSEELSIGKIKFKAFDLRGHQIARRVWKDYYAKVDG 180 AGKTTLLHMLKD LVQH PTQYPTSEELSIGKIKFKAFDL GHQIARRVWKDYYAKVD Sbjct: 31 AGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDA 90
Query: 181 IVYLVDAADKERFAESKKELDGLLSHDSLAQVPFLILGNKIDIPIAASEDELRYYLGLSS 360 +VYLVDAADKERFAESKKELD LLS DSL VPFLILGNKIDIP AASEDELRYYLGLS+ Sbjct: 91 VVYLVDAADKERFAESKKELDALLSDDSLTNVPFLILGNKIDIPYAASEDELRYYLGLSN 150
Query: 361 YTTGKGKVNLTDSNIRPIEVFMCSIVRKMGYGDGFKWLSQYIK 489 YTTGKGKVNL DSN+R IEVFMCSIVRKMGYG+G KWLSQYIK Sbjct: 151 YTTGKGKVNLADSNVRAIEVFMCSIVRKMGYGEGIKWLSQYIK 193
>tr|Q9SDK4|Q9SDK4_ORYSJ cDNA clone:001-008-G03, full insert sequence OS=Oryza sativa subsp. japonica GN=P0705D01.9 PE=2 SV=1 Length = 193
Score = 293 bits (750), Expect = 3e-78 Identities = 141/163 (86%), Positives = 152/163 (93%) Frame = +1
Query: 1 AGKTTLLHMLKDAWLVQHHPTQYPTSEELSIGKIKFKAFDLRGHQIARRVWKDYYAKVDG 180 AGKTTLLHMLKD LVQH PTQYPTSEELSIGKIKFKAFDL GHQIARRVWKDYYAKVD Sbjct: 31 AGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDA 90
Query: 181 IVYLVDAADKERFAESKKELDGLLSHDSLAQVPFLILGNKIDIPIAASEDELRYYLGLSS 360 +VYLVDAADKERFAESKKELD LL+ DSLA VPFLILGNKIDIP AASE+ELRYYLGLS+ Sbjct: 91 VVYLVDAADKERFAESKKELDALLADDSLATVPFLILGNKIDIPYAASEEELRYYLGLSN 150
Query: 361 YTTGKGKVNLTDSNIRPIEVFMCSIVRKMGYGDGFKWLSQYIK 489 +TTGKG VNL DSN+RP+E+FMCS+VRKMGYG+GFKW+SQYIK Sbjct: 151 FTTGKGNVNLADSNVRPLEIFMCSVVRKMGYGEGFKWMSQYIK 193
>tr|B8ABU1|B8ABU1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01215 PE=4 SV=1 Length = 193
Score = 293 bits (750), Expect = 3e-78 Identities = 141/163 (86%), Positives = 152/163 (93%) Frame = +1
Query: 1 AGKTTLLHMLKDAWLVQHHPTQYPTSEELSIGKIKFKAFDLRGHQIARRVWKDYYAKVDG 180 AGKTTLLHMLKD LVQH PTQYPTSEELSIGKIKFKAFDL GHQIARRVWKDYYAKVD Sbjct: 31 AGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDA 90
Query: 181 IVYLVDAADKERFAESKKELDGLLSHDSLAQVPFLILGNKIDIPIAASEDELRYYLGLSS 360 +VYLVDAADKERFAESKKELD LL+ DSLA VPFLILGNKIDIP AASE+ELRYYLGLS+ Sbjct: 91 VVYLVDAADKERFAESKKELDALLADDSLATVPFLILGNKIDIPYAASEEELRYYLGLSN 150
Query: 361 YTTGKGKVNLTDSNIRPIEVFMCSIVRKMGYGDGFKWLSQYIK 489 +TTGKG VNL DSN+RP+E+FMCS+VRKMGYG+GFKW+SQYIK Sbjct: 151 FTTGKGNVNLADSNVRPLEIFMCSVVRKMGYGEGFKWMSQYIK 193
>tr|B7ZZP2|B7ZZP2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 193
Score = 291 bits (745), Expect = 1e-77 Identities = 142/163 (87%), Positives = 152/163 (93%) Frame = +1
Query: 1 AGKTTLLHMLKDAWLVQHHPTQYPTSEELSIGKIKFKAFDLRGHQIARRVWKDYYAKVDG 180 AGKTTLLHMLKD LVQH PTQ+PTSEELSIGKIKFKAFDL GHQIARRVWKDYYAKVD Sbjct: 31 AGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDA 90
Query: 181 IVYLVDAADKERFAESKKELDGLLSHDSLAQVPFLILGNKIDIPIAASEDELRYYLGLSS 360 +VYLVDA DKERFAESKKELD LLS DSLA VPFLILGNKIDIP AASE+ELRY+LGLS+ Sbjct: 91 VVYLVDAYDKERFAESKKELDALLSDDSLANVPFLILGNKIDIPYAASEEELRYHLGLSN 150
Query: 361 YTTGKGKVNLTDSNIRPIEVFMCSIVRKMGYGDGFKWLSQYIK 489 +TTGKGKVNL DSN+RP+EVFMCS+VRKMGYGDGFKW+SQYIK Sbjct: 151 FTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK 193
>tr|B6TG58|B6TG58_MAIZE GTP-binding protein SAR1A OS=Zea mays PE=2 SV=1 Length = 193
Score = 291 bits (745), Expect = 1e-77 Identities = 142/163 (87%), Positives = 152/163 (93%) Frame = +1
Query: 1 AGKTTLLHMLKDAWLVQHHPTQYPTSEELSIGKIKFKAFDLRGHQIARRVWKDYYAKVDG 180 AGKTTLLHMLKD LVQH PTQ+PTSEELSIGKIKFKAFDL GHQIARRVWKDYYAKVD Sbjct: 31 AGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDA 90
Query: 181 IVYLVDAADKERFAESKKELDGLLSHDSLAQVPFLILGNKIDIPIAASEDELRYYLGLSS 360 +VYLVDA DKERFAESKKELD LLS DSLA VPFLILGNKIDIP AASE+ELRY+LGLS+ Sbjct: 91 VVYLVDAYDKERFAESKKELDALLSDDSLANVPFLILGNKIDIPYAASEEELRYHLGLSN 150
Query: 361 YTTGKGKVNLTDSNIRPIEVFMCSIVRKMGYGDGFKWLSQYIK 489 +TTGKGKVNL DSN+RP+EVFMCS+VRKMGYGDGFKW+SQYIK Sbjct: 151 FTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK 193
>tr|B4FPT6|B4FPT6_MAIZE GTP-binding protein SAR1A OS=Zea mays PE=2 SV=1 Length = 193
Score = 291 bits (744), Expect = 2e-77 Identities = 139/163 (85%), Positives = 151/163 (92%) Frame = +1
Query: 1 AGKTTLLHMLKDAWLVQHHPTQYPTSEELSIGKIKFKAFDLRGHQIARRVWKDYYAKVDG 180 AGKTTLLHMLKD LVQH PTQYPTSEELSIG+IKFKAFDL GHQIARRVWKDYYAKVD Sbjct: 31 AGKTTLLHMLKDERLVQHQPTQYPTSEELSIGRIKFKAFDLGGHQIARRVWKDYYAKVDA 90
Query: 181 IVYLVDAADKERFAESKKELDGLLSHDSLAQVPFLILGNKIDIPIAASEDELRYYLGLSS 360 +VYLVDA DKERFAESKKELD LL+ DSLA VPFLILGNKIDIP AASE+ELRYYLGLS+ Sbjct: 91 VVYLVDAVDKERFAESKKELDALLADDSLANVPFLILGNKIDIPYAASEEELRYYLGLSN 150
Query: 361 YTTGKGKVNLTDSNIRPIEVFMCSIVRKMGYGDGFKWLSQYIK 489 +TTGKG VNL DSN+RP+E+FMCS+VRKMGYG+GFKW+SQYIK Sbjct: 151 FTTGKGNVNLADSNVRPLEIFMCSVVRKMGYGEGFKWMSQYIK 193
>tr|A9RG76|A9RG76_PHYPA Sar1-family small GTPase OS=Physcomitrella patens subsp. patens GN=Sar12 PE=3 SV=1 Length = 193
Score = 290 bits (741), Expect = 3e-77 Identities = 142/163 (87%), Positives = 150/163 (92%) Frame = +1
Query: 1 AGKTTLLHMLKDAWLVQHHPTQYPTSEELSIGKIKFKAFDLRGHQIARRVWKDYYAKVDG 180 AGKTTLLHMLKD L QH PTQYPTSEELSIGKIKFKAFDL GHQIARRVWKDYYAKVDG Sbjct: 31 AGKTTLLHMLKDERLAQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDG 90
Query: 181 IVYLVDAADKERFAESKKELDGLLSHDSLAQVPFLILGNKIDIPIAASEDELRYYLGLSS 360 IVYLVDAADKERF+ESKKELD LLS DSL QVPFL+LGNKIDIP A SEDELRY LGLS+ Sbjct: 91 IVYLVDAADKERFSESKKELDALLSDDSLGQVPFLVLGNKIDIPYAVSEDELRYSLGLSN 150
Query: 361 YTTGKGKVNLTDSNIRPIEVFMCSIVRKMGYGDGFKWLSQYIK 489 +TTGKGKVNL D+N+RPIEVFMCSIVRKMGYG+G KW+SQYIK Sbjct: 151 FTTGKGKVNLGDTNMRPIEVFMCSIVRKMGYGEGIKWMSQYIK 193
>tr|A9NLN4|A9NLN4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 193
Score = 290 bits (741), Expect = 3e-77 Identities = 141/163 (86%), Positives = 151/163 (92%) Frame = +1
Query: 1 AGKTTLLHMLKDAWLVQHHPTQYPTSEELSIGKIKFKAFDLRGHQIARRVWKDYYAKVDG 180 AGKTTLLHMLKD LVQH PTQYPTSEELSIG+IKFKAFDL GHQIARRVWKDYYAKVD Sbjct: 31 AGKTTLLHMLKDERLVQHQPTQYPTSEELSIGQIKFKAFDLGGHQIARRVWKDYYAKVDA 90
Query: 181 IVYLVDAADKERFAESKKELDGLLSHDSLAQVPFLILGNKIDIPIAASEDELRYYLGLSS 360 +VYLVDAADKERFAES+KELD LL+ DSL VPFLILGNKIDIP AASE+ELRYYL L++ Sbjct: 91 VVYLVDAADKERFAESRKELDALLTDDSLTNVPFLILGNKIDIPYAASEEELRYYLSLAN 150
Query: 361 YTTGKGKVNLTDSNIRPIEVFMCSIVRKMGYGDGFKWLSQYIK 489 YTTGKGKVNL+DSN+RPIEVFMCSIVRKMGYG+G KWLSQYIK Sbjct: 151 YTTGKGKVNLSDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK 193
>tr|Q6PLR8|Q6PLR8_MAIZE Putative ras-like small GTP binding ptotein OS=Zea mays PE=2 SV=1 Length = 193
Score = 289 bits (740), Expect = 4e-77 Identities = 138/163 (84%), Positives = 151/163 (92%) Frame = +1
Query: 1 AGKTTLLHMLKDAWLVQHHPTQYPTSEELSIGKIKFKAFDLRGHQIARRVWKDYYAKVDG 180 AGKTTLLHMLKD LVQH PTQYPTSEELSIG+IKFKAFDL GHQIARRVWKDYYAKVD Sbjct: 31 AGKTTLLHMLKDERLVQHQPTQYPTSEELSIGRIKFKAFDLGGHQIARRVWKDYYAKVDA 90
Query: 181 IVYLVDAADKERFAESKKELDGLLSHDSLAQVPFLILGNKIDIPIAASEDELRYYLGLSS 360 +VYLVDA DKERFAESKKELD LL+ DSLA VPFLILGNKIDIP AASE+ELRYYLGLS+ Sbjct: 91 VVYLVDAVDKERFAESKKELDALLADDSLANVPFLILGNKIDIPYAASEEELRYYLGLSN 150
Query: 361 YTTGKGKVNLTDSNIRPIEVFMCSIVRKMGYGDGFKWLSQYIK 489 +TTGKG VNL DSN+RP+++FMCS+VRKMGYG+GFKW+SQYIK Sbjct: 151 FTTGKGNVNLADSNVRPLKIFMCSVVRKMGYGEGFKWMSQYIK 193
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