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NBDC - LSDB Archive
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DK945763
Clone id YMU02A01NGRL0010_F22
Library
Length 527
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_F22. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GTGTAGCTCCTAGCTGCGCCCCCGCATAGAGCTTGTCAAAGAGCTTCTCTGGTCTCAAGG
CCACTACCCTAGTTCGCCCCCTAGAGCCCCAACCCGCTCGCCATCTCTGATGGCACCTCG
TGTGAGCGCCATGCTTGTGTGTAATCCGTATGACAACAAGAAGTTCGAGACTCTGTCCTA
CTTGCCGCCCTTGTCAAGTGAGCATATTGCGAACCACGTGGACTTCATGGTCCTAAAAGG
CTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCCACGG
CAGCCGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCTGCCA
AGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTGAAGCCTT
CATCCGCGTGCTGGGCTTTGACGCTCAGAGGCATGTGCATGTCTCCAGCTTCCTTGTCCA
TAAGCCCTCTGTCTAAACTTTCTTAAAGCATGCCAATTTAGTTGGCA
■■Homology search results ■■ -
sp_hit_id O48550
Definition sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zantedeschia aethiopica
Align length 123
Score (bit) 159.0
E-value 1.0e-38
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945763|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_F22, 5'
         (527 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   159   1e-38
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   158   1e-38
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   157   3e-38
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   156   7e-38
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   155   1e-37
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   155   1e-37
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   155   1e-37
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   155   1e-37
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   155   1e-37
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   155   1e-37
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   154   2e-37
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   154   3e-37
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   154   3e-37
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   153   4e-37
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   153   6e-37
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   153   6e-37
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   152   9e-37
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   152   9e-37
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   152   9e-37
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   152   1e-36
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   151   2e-36
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   151   2e-36
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   151   2e-36
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   150   4e-36
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai...   150   4e-36
sp|P26573|RBS8_NICPL Ribulose bisphosphate carboxylase small cha...   150   4e-36
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   150   4e-36
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   150   4e-36
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   149   8e-36
sp|Q08183|RBS3_MESCR Ribulose bisphosphate carboxylase small cha...   149   1e-35

>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  159 bits (401), Expect = 1e-38
 Identities = 70/123 (56%), Positives = 87/123 (70%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFDKIGSVYREHFH 298
           RV  M V  P   KKFETLSYLPPL+ E +   VD+++  GW PCIEF K+G VYRE+ +
Sbjct: 53  RVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHN 112

Query: 299 GSRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSSFLV 478
              YYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++GFD  R V   SFL 
Sbjct: 113 SPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLT 172

Query: 479 HKP 487
           +KP
Sbjct: 173 YKP 175


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  158 bits (400), Expect = 1e-38
 Identities = 72/124 (58%), Positives = 88/124 (70%), Gaps = 1/124 (0%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFD-KIGSVYREHF 295
           RV  M V  P   KK+ETLSYLPPLS E ++  +D+++   W PC+EF+ + G VYREH 
Sbjct: 54  RVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHH 113

Query: 296 HGSRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSSFL 475
           H   YYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD  R V   SF+
Sbjct: 114 HSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFI 173

Query: 476 VHKP 487
           V KP
Sbjct: 174 VAKP 177


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  157 bits (397), Expect = 3e-38
 Identities = 74/126 (58%), Positives = 91/126 (72%), Gaps = 1/126 (0%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFDKIGSVYREHFH 298
           RVS M V  PY+N KFETLSYLPPLS + +A  +D+++  GW PCIEFD  G+V RE   
Sbjct: 55  RVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQGTVTREGST 114

Query: 299 GSRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEY-PEAFIRVLGFDAQRHVHVSSFL 475
              YYDGRYW MWKLPMFGC D+A+VLREI EC K Y  + +IR LGFD  R V  +SF+
Sbjct: 115 MPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLGFDNTRQVQCASFI 174

Query: 476 VHKPSV 493
           VH+P++
Sbjct: 175 VHQPTL 180


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  156 bits (394), Expect = 7e-38
 Identities = 72/124 (58%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFD-KIGSVYREHF 295
           RV  M V  P   KKFETLSYLPPLSSE +A  VD+++ K   PC+EF+ + G VYREH 
Sbjct: 56  RVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHN 115

Query: 296 HGSRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSSFL 475
               YYDGRYW MWKLPMFGC D++ VL+E+ EC K YP AFIR++GFD +R V + SF+
Sbjct: 116 RSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFI 175

Query: 476 VHKP 487
            +KP
Sbjct: 176 AYKP 179


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  155 bits (392), Expect = 1e-37
 Identities = 69/123 (56%), Positives = 87/123 (70%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFDKIGSVYREHFH 298
           RV  M V  P+ N KFETLSYLP L+ E +   V++++   W PC+EFD  GS+ R++  
Sbjct: 48  RVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNR 107

Query: 299 GSRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSSFLV 478
              YYDGRYWVMWKLPMFGC +A+ V+ E+ ECAK YP+AFIRV+GFD  R V   SF+V
Sbjct: 108 SPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCISFIV 167

Query: 479 HKP 487
           HKP
Sbjct: 168 HKP 170


>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1
          Length = 189

 Score =  155 bits (392), Expect = 1e-37
 Identities = 70/123 (56%), Positives = 87/123 (70%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFDKIGSVYREHFH 298
           RV  M V  PY NKKFETLSYLP L+ E +   V++++   W PC+EF++ G + R + +
Sbjct: 64  RVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKRVYGN 123

Query: 299 GSRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSSFLV 478
              YYDGRYWVMWKLPMFGC +A+ VL E+ ECAK YP AFIRV+GFD  R V   SF+V
Sbjct: 124 SPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCISFIV 183

Query: 479 HKP 487
           HKP
Sbjct: 184 HKP 186


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  155 bits (391), Expect = 1e-37
 Identities = 71/124 (57%), Positives = 86/124 (69%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFDKIGSVYREHFH 298
           RVS M V  P   KKFETLSYLPPLS E +A  VD+++   W PCIEF K G VYRE+  
Sbjct: 54  RVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA 113

Query: 299 GSRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSSFLV 478
              YYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD +R V   SF+ 
Sbjct: 114 SPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIA 173

Query: 479 HKPS 490
           +KP+
Sbjct: 174 YKPT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  155 bits (391), Expect = 1e-37
 Identities = 71/124 (57%), Positives = 86/124 (69%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFDKIGSVYREHFH 298
           RVS M V  P   KKFETLSYLPPLS E +A  VD+++   W PCIEF K G VYRE+  
Sbjct: 54  RVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA 113

Query: 299 GSRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSSFLV 478
              YYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD +R V   SF+ 
Sbjct: 114 SPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIA 173

Query: 479 HKPS 490
           +KP+
Sbjct: 174 YKPT 177


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
          Length = 177

 Score =  155 bits (391), Expect = 1e-37
 Identities = 71/124 (57%), Positives = 86/124 (69%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFDKIGSVYREHFH 298
           RVS M V  P   KKFETLSYLPPLS E +A  VD+++   W PCIEF K G VYRE+  
Sbjct: 54  RVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA 113

Query: 299 GSRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSSFLV 478
              YYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD +R V   SF+ 
Sbjct: 114 SPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIA 173

Query: 479 HKPS 490
           +KP+
Sbjct: 174 YKPT 177


>sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40A, chloroplastic OS=Lemna gibba GN=SSU40A PE=3 SV=1
          Length = 177

 Score =  155 bits (391), Expect = 1e-37
 Identities = 71/124 (57%), Positives = 86/124 (69%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFDKIGSVYREHFH 298
           RVS M V  P   KKFETLSYLPPLS E +A  VD+++   W PCIEF K G VYRE+  
Sbjct: 54  RVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA 113

Query: 299 GSRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSSFLV 478
              YYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD +R V   SF+ 
Sbjct: 114 SPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIA 173

Query: 479 HKPS 490
           +KP+
Sbjct: 174 YKPT 177
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 124
Score (bit) 216.0
E-value 7.0e-59
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945763|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_F22, 5'
         (527 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   216   7e-59
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   162   7e-39
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   162   7e-39
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   162   7e-39
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   160   3e-38
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   159   8e-38
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   156   5e-37
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   155   6e-37
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   155   6e-37
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   156   7e-37
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   155   1e-36
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   154   1e-36
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   155   2e-36
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c...   155   2e-36
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c...   155   2e-36
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c...   155   2e-36
tr|A9NM29|A9NM29_PICSI Ribulose bisphosphate carboxylase small c...   155   2e-36
tr|A9NLD6|A9NLD6_PICSI Ribulose bisphosphate carboxylase small c...   155   2e-36
tr|A9NL36|A9NL36_PICSI Ribulose bisphosphate carboxylase small c...   155   2e-36
tr|A9NKU8|A9NKU8_PICSI Ribulose bisphosphate carboxylase small c...   155   2e-36
tr|Q8CFJ2|Q8CFJ2_MOUSE Putative uncharacterized protein OS=Mus m...   154   3e-36
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   154   3e-36
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   154   3e-36
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   154   3e-36
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   153   4e-36
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   153   4e-36
tr|A5PJI4|A5PJI4_BOVIN Putative uncharacterized protein OS=Bos t...   153   4e-36
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   153   6e-36
tr|B3H5S2|B3H5S2_ARATH Uncharacterized protein At5g38410.3 OS=Ar...   152   8e-36
tr|A9NXP2|A9NXP2_PICSI Ribulose bisphosphate carboxylase small c...   152   8e-36

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  216 bits (549), Expect(2) = 7e-59
 Identities = 98/124 (79%), Positives = 109/124 (87%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFDKIGSVYREHFH 298
           R+SAMLV  PYDNKKFETLSYLPPL+++ IA  V++MV KGWTPCIEFD IGSVYREHFH
Sbjct: 50  RISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFH 109

Query: 299 GSRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSSFLV 478
           GS YYDGRYW+MWKLPMFGC D+ +VLREIAECAKEYP AFIRVLGFDA+R V V+ FLV
Sbjct: 110 GSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLV 169

Query: 479 HKPS 490
            KPS
Sbjct: 170 KKPS 173



 Score = 35.0 bits (79), Expect(2) = 7e-59
 Identities = 20/26 (76%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
 Frame = +3

Query: 6  APSCAPA*-SLSKSFSGLKATTLVRP 80
          APSCA A  SLSKSFSGLKA TL  P
Sbjct: 12 APSCAAAAESLSKSFSGLKANTLFAP 37


>tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small
           chain OS=Oryza sativa subsp. japonica GN=P0463E12.1 PE=3
           SV=1
          Length = 183

 Score =  162 bits (411), Expect = 7e-39
 Identities = 67/123 (54%), Positives = 91/123 (73%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFDKIGSVYREHFH 298
           R   M   NP+ N+++E +SYLPPLS++ I+  ++F++ KGW PC+EFDK G ++R +  
Sbjct: 47  RTYCMQTWNPFTNRRYEAMSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKEGEIHRSNSR 106

Query: 299 GSRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSSFLV 478
              YYDGRYW +WKLPMFGC DAAAVLRE+ EC +EYP+AFIR++ FD+ R     SF+V
Sbjct: 107 MPGYYDGRYWTLWKLPMFGCSDAAAVLREVEECRREYPDAFIRLIAFDSSRQCQCMSFVV 166

Query: 479 HKP 487
           HKP
Sbjct: 167 HKP 169


>tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05882 PE=4 SV=1
          Length = 183

 Score =  162 bits (411), Expect = 7e-39
 Identities = 67/123 (54%), Positives = 91/123 (73%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFDKIGSVYREHFH 298
           R   M   NP+ N+++E +SYLPPLS++ I+  ++F++ KGW PC+EFDK G ++R +  
Sbjct: 47  RTYCMQTWNPFTNRRYEAMSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKEGEIHRSNSR 106

Query: 299 GSRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSSFLV 478
              YYDGRYW +WKLPMFGC DAAAVLRE+ EC +EYP+AFIR++ FD+ R     SF+V
Sbjct: 107 MPGYYDGRYWTLWKLPMFGCSDAAAVLREVEECRREYPDAFIRLIAFDSSRQCQCMSFVV 166

Query: 479 HKP 487
           HKP
Sbjct: 167 HKP 169


>tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small
           chain OS=Oryza sativa subsp. japonica GN=OsJ_005253 PE=3
           SV=1
          Length = 234

 Score =  162 bits (411), Expect = 7e-39
 Identities = 67/123 (54%), Positives = 91/123 (73%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFDKIGSVYREHFH 298
           R   M   NP+ N+++E +SYLPPLS++ I+  ++F++ KGW PC+EFDK G ++R +  
Sbjct: 98  RTYCMQTWNPFTNRRYEAMSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKEGEIHRSNSR 157

Query: 299 GSRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSSFLV 478
              YYDGRYW +WKLPMFGC DAAAVLRE+ EC +EYP+AFIR++ FD+ R     SF+V
Sbjct: 158 MPGYYDGRYWTLWKLPMFGCSDAAAVLREVEECRREYPDAFIRLIAFDSSRQCQCMSFVV 217

Query: 479 HKP 487
           HKP
Sbjct: 218 HKP 220


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  160 bits (406), Expect = 3e-38
 Identities = 72/124 (58%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFD-KIGSVYREHF 295
           RV  M V  P   KK+ETLSYLPPLS E ++  +D+++   W PC+EF+ + G VYREH 
Sbjct: 54  RVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVYREHH 113

Query: 296 HGSRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSSFL 475
           H   YYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD+ R V   SF+
Sbjct: 114 HSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFI 173

Query: 476 VHKP 487
           V KP
Sbjct: 174 VSKP 177


>tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small
           chain OS=Ammopiptanthus mongolicus PE=2 SV=1
          Length = 174

 Score =  159 bits (402), Expect = 8e-38
 Identities = 71/124 (57%), Positives = 90/124 (72%), Gaps = 1/124 (0%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFD-KIGSVYREHF 295
           RV  MLV  P   KKFETLSYLPPLS E +   V++++ KGW PC+EF+ + G VYRE+ 
Sbjct: 46  RVQCMLVWPPLGRKKFETLSYLPPLSIESLTKEVEYLLRKGWVPCLEFELEHGFVYRENN 105

Query: 296 HGSRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSSFL 475
               YYDGRYW MWKLPMFGC DA+ V++E+ EC KEYP AF+R++GFD +R V   SF+
Sbjct: 106 RSPGYYDGRYWTMWKLPMFGCSDASQVMKELEECKKEYPTAFVRIIGFDNKRQVQCISFI 165

Query: 476 VHKP 487
            +KP
Sbjct: 166 AYKP 169


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  156 bits (395), Expect = 5e-37
 Identities = 68/119 (57%), Positives = 85/119 (71%)
 Frame = +2

Query: 131 MLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFDKIGSVYREHFHGSRY 310
           M   NP +NKKFE LSYLPPLS + IA  +D+M+ KGW PC+EFD++GSV REH     Y
Sbjct: 50  MKTWNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVRREHSRMPGY 109

Query: 311 YDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSSFLVHKP 487
           YDGRYW +WKLPMFGC D++ VL EI EC K YP+A+IR L FD +      +F++ KP
Sbjct: 110 YDGRYWTLWKLPMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQGQCMAFVIQKP 168


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  155 bits (392), Expect(2) = 6e-37
 Identities = 72/127 (56%), Positives = 89/127 (70%), Gaps = 3/127 (2%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFDKIGSVYREHFH 298
           RV  M V NP    KFET SYLPPL+ + IA  VDFM+ +   PCIEFD +GSV R +F 
Sbjct: 53  RVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFS 112

Query: 299 G---SRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSS 469
           G   S YYDGRYW MWKLPMFGC D+A VLREI EC + +P  ++RVLGFD+++ V +  
Sbjct: 113 GPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICG 172

Query: 470 FLVHKPS 490
           FLV +P+
Sbjct: 173 FLVARPN 179



 Score = 21.9 bits (45), Expect(2) = 6e-37
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 39 KSFSGLKATTL 71
          K FSGLK+TTL
Sbjct: 27 KQFSGLKSTTL 37


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  155 bits (392), Expect(2) = 6e-37
 Identities = 72/127 (56%), Positives = 89/127 (70%), Gaps = 3/127 (2%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFDKIGSVYREHFH 298
           RV  M V NP    KFET SYLPPL+ + IA  VDFM+ +   PCIEFD +GSV R +F 
Sbjct: 53  RVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFS 112

Query: 299 G---SRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSS 469
           G   S YYDGRYW MWKLPMFGC D+A VLREI EC + +P  ++RVLGFD+++ V +  
Sbjct: 113 GPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICG 172

Query: 470 FLVHKPS 490
           FLV +P+
Sbjct: 173 FLVARPN 179



 Score = 21.9 bits (45), Expect(2) = 6e-37
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 39 KSFSGLKATTL 71
          K FSGLK+TTL
Sbjct: 27 KQFSGLKSTTL 37


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  156 bits (394), Expect = 7e-37
 Identities = 70/124 (56%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
 Frame = +2

Query: 119 RVSAMLVCNPYDNKKFETLSYLPPLSSEHIANHVDFMVLKGWTPCIEFD-KIGSVYREHF 295
           RV  M V  P   KKFETLSYLP L+ E ++  VD+++  GW PC+EF+ + G VYREH 
Sbjct: 55  RVQCMKVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHH 114

Query: 296 HGSRYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAQRHVHVSSFL 475
           H   YYDGRYW MWKLPMFGC D++ VL+E+ EC KEYP A+IR++GFD  R V   SF+
Sbjct: 115 HSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFI 174

Query: 476 VHKP 487
             KP
Sbjct: 175 AFKP 178