DK945782
Clone id YMU02A01NGRL0010_G20
Library
Length 157
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_G20. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GCAAATGGGATTAGATACCCCATTAGTCCTAGCCGTAAACGATGGAGATTAATCGCTGCG
CGTATCGACCCGTGCAGTGATGTAGCTTACGCGTTAAATATCCCGCCTGGCCTCTGAATA
CATGAAAGGACCGCCACAAACCAAAAAAAAATCATGT
■■Homology search results ■■ -
sp_hit_id P44302
Definition sp|P44302|Y1738_HAEIN Uncharacterized membrane protein HI1738 OS=Haemophilus influenzae
Align length 34
Score (bit) 28.9
E-value 8.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945782|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_G20, 5'
(157 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P44302|Y1738_HAEIN Uncharacterized membrane protein HI1738 OS... 29 8.4

>sp|P44302|Y1738_HAEIN Uncharacterized membrane protein HI1738
OS=Haemophilus influenzae GN=HI1738 PE=3 SV=1
Length = 244

Score = 28.9 bits (63), Expect = 8.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1

Query: 13 RYPISPSRKRWRLIAARIDPCSDVAYALNIPPGL 114
+Y I +KRW LI +D + Y IPP L
Sbjct: 102 KYGIHIGKKRWYLITTLVDESFSLNYMAKIPPHL 135


tr_hit_id A1IW38
Definition tr|A1IW38|A1IW38_9LAMI Putative uncharacterized protein ophh-67 (Fragment) OS=Phillyrea latifolia
Align length 36
Score (bit) 60.8
E-value 3.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945782|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_G20, 5'
(157 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A1IW38|A1IW38_9LAMI Putative uncharacterized protein ophh-67 ... 61 3e-08
tr|Q5W7C9|Q5W7C9_ORYSJ Unknow protein OS=Oryza sativa subsp. jap... 54 5e-06
tr|B0TIG5|B0TIG5_HELMI Putative uncharacterized protein OS=Helio... 35 1.4
tr|A4VYJ1|A4VYJ1_STRS2 Putative uncharacterized protein OS=Strep... 34 3.2
tr|Q302M8|Q302M8_STRSU Putative uncharacterized protein OS=Strep... 34 3.2

>tr|A1IW38|A1IW38_9LAMI Putative uncharacterized protein ophh-67
(Fragment) OS=Phillyrea latifolia GN=ophh-67 PE=2 SV=1
Length = 84

Score = 60.8 bits (146), Expect = 3e-08
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = -3

Query: 110 PGGIFNA*ATSLHGSIRAAINLHRLRLGLMGYLIPF 3
PGGI NA AT+LHGSIR A ++HRLRLGL+GYLIPF
Sbjct: 4 PGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPF 39


>tr|Q5W7C9|Q5W7C9_ORYSJ Unknow protein OS=Oryza sativa subsp.
japonica GN=P0496H07.14 PE=4 SV=1
Length = 265

Score = 53.5 bits (127), Expect = 5e-06
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = -3

Query: 110 PGGIFNA*ATSLHGSIRAAINLHRLRLGLMGYLIPF 3
PGGI NA AT+LHGS R ++HRLRLGL+G LIPF
Sbjct: 4 PGGILNALATALHGSSRTTPSIHRLRLGLLGSLIPF 39


>tr|B0TIG5|B0TIG5_HELMI Putative uncharacterized protein
OS=Heliobacterium modesticaldum (strain ATCC 51547 /
Ice1) GN=Helmi_22810 PE=4 SV=1
Length = 113

Score = 35.4 bits (80), Expect = 1.4
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -3

Query: 110 PGGIFNA*ATSLHGSIRAAINLHRLRLGLMGYLIPF 3
PGG+ +L GSI + HRLR GL GYLI F
Sbjct: 6 PGGVLIVLTAALEGSIPPTPSTHRLRRGLPGYLILF 41


>tr|A4VYJ1|A4VYJ1_STRS2 Putative uncharacterized protein
OS=Streptococcus suis (strain 98HAH33) GN=SSU98_0020
PE=4 SV=1
Length = 186

Score = 34.3 bits (77), Expect = 3.2
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -3

Query: 110 PGGIFNA*ATSLHGSIRAAINLHRLRLGLMGYLIPF 3
PGG+ NA A +L + HRLR GL GYLI F
Sbjct: 6 PGGVLNALAAALSPGKDPTPSTHRLRRGLPGYLILF 41


>tr|Q302M8|Q302M8_STRSU Putative uncharacterized protein
OS=Streptococcus suis 89/1591 GN=SsuiDRAFT_1635 PE=4
SV=1
Length = 186

Score = 34.3 bits (77), Expect = 3.2
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -3

Query: 110 PGGIFNA*ATSLHGSIRAAINLHRLRLGLMGYLIPF 3
PGG+ NA A +L + HRLR GL GYLI F
Sbjct: 6 PGGVLNALAAALSPGKDPTPSTHRLRRGLPGYLILF 41