BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945785|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_H01, 5'
         (163 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q85FI5|RK16_ADICA 50S ribosomal protein L16, chloroplastic OS...    45   1e-04
sp|Q8WHY5|RK16_PSINU 50S ribosomal protein L16, chloroplastic OS...    32   1.3  
sp|P06383|RK16_MARPO 50S ribosomal protein L16, chloroplastic OS...    30   3.8  
sp|A2T371|RK16_ANGEV 50S ribosomal protein L16, chloroplastic OS...    30   3.8  

>sp|Q85FI5|RK16_ADICA 50S ribosomal protein L16, chloroplastic
           OS=Adiantum capillus-veneris GN=rpl16 PE=2 SV=1
          Length = 137

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +3

Query: 3   AAMLIAAHKMPIQTRLVTSEKL 68
           AAMLIAAHKMPIQTRLVTSEKL
Sbjct: 116 AAMLIAAHKMPIQTRLVTSEKL 137


>sp|Q8WHY5|RK16_PSINU 50S ribosomal protein L16, chloroplastic
           OS=Psilotum nudum GN=rpl16 PE=3 SV=1
          Length = 140

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +3

Query: 3   AAMLIAAHKMPIQTRLVTSEKL 68
           AAM IAAHKMPI T+ +T  +L
Sbjct: 116 AAMKIAAHKMPIHTKFITLSQL 137


>sp|P06383|RK16_MARPO 50S ribosomal protein L16, chloroplastic
           OS=Marchantia polymorpha GN=rpl16 PE=3 SV=1
          Length = 143

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 3   AAMLIAAHKMPIQTRLVTSEKL 68
           AAM IAA+KMPI+T+ +T+  L
Sbjct: 116 AAMKIAAYKMPIRTQFITTSSL 137


>sp|A2T371|RK16_ANGEV 50S ribosomal protein L16, chloroplastic
           OS=Angiopteris evecta GN=rpl16 PE=3 SV=1
          Length = 146

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 13/22 (59%), Positives = 19/22 (86%)
 Frame = +3

Query: 3   AAMLIAAHKMPIQTRLVTSEKL 68
           AAM IAA+KMPI+T+ +T+ K+
Sbjct: 116 AAMKIAAYKMPIRTQFITTIKM 137

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945785|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_H01, 5'
         (163 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******