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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945789
Clone id YMU02A01NGRL0010_H06
Library
Length 592
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_H06. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GCATGCAAATTTAGATCCCATTGCACAGTTCTCAATACCAATCGTGACACATATGAATAA
AGATCACGCGGACGATACAAAGAGAATAGTGGAGAAAGCCATAGGAATCAATGTAGAGAG
TGCCAGAATCATTGACCTGGATACTCTTGGTTTGAATGTTCAGGTTGTTTTCCAAAGCAA
GCCAATAAAGCTTAGAGTGCCATTTCCAAGACCAGCACAAGATAGAAAGGATGTGAAGAA
CTTGATTGTTCAAATGTTGAAAGGTTAAGGAAGCATAGTAAAAAAATGTACAGGAAAGTT
TTAGGAAAATCCCAGAACTATGTTAGACCAAGCTAGAGTCACTTCATTGTATTCTAGAAT
GTACAGGAAAATTCCAAAACTATGTTAGACCAAGGTCCTCTTGTACCTAGTATGTTTTTA
CCTTGTGCATGAATCAGAAACTCCAAAACTATGTTAGACCAAGGTAGAGAGAGTCGCCTA
GTCCTCTTGTACCTACTATGTTTTTACCTTGTGCATGAAGCAGAAATTCTTGACAATATA
TTCCAAGCGTTGTGCATACTTATTATGTTGGGTGGACTTGCACATGAAGTTT
■■Homology search results ■■ -
sp_hit_id P44061
Definition sp|P44061|Y854_HAEIN Uncharacterized protein HI0854 OS=Haemophilus influenzae
Align length 73
Score (bit) 32.7
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945789|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_H06, 5'
         (592 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P44061|Y854_HAEIN Uncharacterized protein HI0854 OS=Haemophil...    33   1.4  
sp|Q54K36|Y7557_DICDI Uncharacterized protein DDB_G0287625 OS=Di...    33   1.4  
sp|P0A5S6|PPNK_MYCTU Inorganic polyphosphate/ATP-NAD kinase OS=M...    31   4.1  
sp|P0A5S7|PPNK_MYCBO Inorganic polyphosphate/ATP-NAD kinase OS=M...    31   4.1  
sp|Q550W1|CAPTC_DICDI Uncharacterized CDP-alcohol phosphatidyltr...    31   4.1  

>sp|P44061|Y854_HAEIN Uncharacterized protein HI0854 OS=Haemophilus
           influenzae GN=HI0854 PE=1 SV=1
          Length = 253

 Score = 32.7 bits (73), Expect = 1.4
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +2

Query: 41  IVTHMNKDHADDTKRIVEKAIG-INVESARIIDLDTLGLNVQVVFQSKPIKLRVPFPRPA 217
           I+THMN  H DD   + +K  G   +    ++++D  GL+ +    +    LRV FP+ A
Sbjct: 6   IITHMNDHHQDDMAVLCKKFGGEKEITDVTLVNVDFAGLDFK---YNGGKTLRVEFPQQA 62

Query: 218 QDRKDVKNLIVQM 256
            D   +K +I+ +
Sbjct: 63  -DAGSIKQVIINL 74


>sp|Q54K36|Y7557_DICDI Uncharacterized protein DDB_G0287625
           OS=Dictyostelium discoideum GN=DDB_G0287625 PE=4 SV=1
          Length = 981

 Score = 32.7 bits (73), Expect = 1.4
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 43  RDTYE*RSRGRYKENSGESHRNQCRE 120
           RD Y  R RGRY+E  GE  RN+ R+
Sbjct: 404 RDGYRERDRGRYRERGGERERNRNRD 429


>sp|P0A5S6|PPNK_MYCTU Inorganic polyphosphate/ATP-NAD kinase
           OS=Mycobacterium tuberculosis GN=ppnK PE=1 SV=1
          Length = 307

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +2

Query: 23  AQFSIPIVTHMNKDHADDTKRIVEKAIGINVESARIIDLDTL 148
           A  S+ +V H  +D A +T R VEK +G N  + R++  + +
Sbjct: 3   AHRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAV 44


>sp|P0A5S7|PPNK_MYCBO Inorganic polyphosphate/ATP-NAD kinase
           OS=Mycobacterium bovis GN=ppnK PE=3 SV=1
          Length = 307

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +2

Query: 23  AQFSIPIVTHMNKDHADDTKRIVEKAIGINVESARIIDLDTL 148
           A  S+ +V H  +D A +T R VEK +G N  + R++  + +
Sbjct: 3   AHRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAV 44


>sp|Q550W1|CAPTC_DICDI Uncharacterized CDP-alcohol
           phosphatidyltransferase class-I family protein 3
           OS=Dictyostelium discoideum GN=captC PE=2 SV=1
          Length = 399

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 31/96 (32%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
 Frame = -1

Query: 304 LKLSC--TFFYYASLTFQHLNNQVLHILS----ILCWSWKWHSKLYWLALENNLNIQTKS 143
           L L C  T F+      QHL  +   IL     IL W     S   W     NL +   S
Sbjct: 236 LSLPCLITCFFNIKNVVQHLQAKQKPILPALKHILVWVIITVSSFIWYYTSTNL-LPLSS 294

Query: 142 IQVNDSGTLYIDSYGFLHYSLCIVRVIFIHMCHDWY 35
           I  N+  T+   S G +   L + R+I  HMCH+ Y
Sbjct: 295 IWFNNIRTVQF-SIGIIFGEL-VSRLILAHMCHEKY 328
tr_hit_id A9RBQ9
Definition tr|A9RBQ9|A9RBQ9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 86
Score (bit) 114.0
E-value 3.0e-24
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945789|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_H06, 5'
         (592 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RBQ9|A9RBQ9_PHYPA Predicted protein (Fragment) OS=Physcomit...   114   3e-24
tr|Q8LDU1|Q8LDU1_ARATH Putative uncharacterized protein OS=Arabi...   108   2e-22
tr|Q9M7D2|Q9M7D2_PEA Root border cell-specific protein OS=Pisum ...   107   4e-22
tr|Q6ZL16|Q6ZL16_ORYSJ Os07g0573800 protein OS=Oryza sativa subs...   106   9e-22
tr|B8B7Q6|B8B7Q6_ORYSI Putative uncharacterized protein OS=Oryza...   106   9e-22
tr|B6SUB0|B6SUB0_MAIZE Root border cell-specific protein OS=Zea ...   106   9e-22
tr|B4G1W4|B4G1W4_MAIZE Putative uncharacterized protein OS=Zea m...   106   9e-22
tr|A7PW46|A7PW46_VITVI Chromosome chr8 scaffold_34, whole genome...   105   3e-21
tr|Q2XPX4|Q2XPX4_SOLTU Root border cell-specific protein-like pr...   100   5e-20
tr|A3BLE3|A3BLE3_ORYSJ Putative uncharacterized protein OS=Oryza...   100   8e-20
tr|Q93WM0|Q93WM0_ARATH AT3g03890/F20H23_6 OS=Arabidopsis thalian...    94   8e-18
tr|A8I247|A8I247_CHLRE Predicted protein OS=Chlamydomonas reinha...    83   1e-14
tr|Q00Z88|Q00Z88_OSTTA Root border cell-specific protein (ISS) O...    76   1e-12
tr|A4S4F1|A4S4F1_OSTLU Predicted protein OS=Ostreococcus lucimar...    73   1e-11
tr|B8BUD7|B8BUD7_THAPS Predicted protein OS=Thalassiosira pseudo...    66   1e-09
tr|B7G091|B7G091_PHATR Predicted protein (Fragment) OS=Phaeodact...    54   7e-06
tr|Q2JWV0|Q2JWV0_SYNJA Putative uncharacterized protein OS=Synec...    50   1e-04
tr|Q7NI19|Q7NI19_GLOVI Glr2365 protein OS=Gloeobacter violaceus ...    49   2e-04
tr|B6U821|B6U821_MAIZE Putative uncharacterized protein OS=Zea m...    49   2e-04
tr|B0JJD7|B0JJD7_MICAN Putative uncharacterized protein OS=Micro...    48   5e-04
tr|Q01TW9|Q01TW9_SOLUE Pyridoxamine 5'-phosphate oxidase-related...    47   6e-04
tr|A8YAW0|A8YAW0_MICAE Similar to tr|Q4CA83|Q4CA83_CROWT Hypothe...    47   6e-04
tr|B4AXB7|B4AXB7_9CHRO Putative uncharacterized protein OS=Cyano...    47   8e-04
tr|A0ZGZ4|A0ZGZ4_NODSP Putative uncharacterized protein OS=Nodul...    47   0.001
tr|Q0J6W9|Q0J6W9_ORYSJ Os08g0254900 protein OS=Oryza sativa subs...    45   0.003
tr|A3BR82|A3BR82_ORYSJ Putative uncharacterized protein OS=Oryza...    45   0.003
tr|B4FIQ7|B4FIQ7_MAIZE Putative uncharacterized protein OS=Zea m...    45   0.004
tr|B8B8S9|B8B8S9_ORYSI Putative uncharacterized protein OS=Oryza...    44   0.005
tr|B1XNN7|B1XNN7_SYNP2 Putative uncharacterized protein OS=Synec...    44   0.009
tr|Q6UA21|Q6UA21_GOSBA Fiber protein Fb4 (Fragment) OS=Gossypium...    44   0.009

>tr|A9RBQ9|A9RBQ9_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_110763 PE=4 SV=1
          Length = 247

 Score =  114 bits (286), Expect = 3e-24
 Identities = 52/86 (60%), Positives = 69/86 (80%), Gaps = 1/86 (1%)
 Frame = +2

Query: 11  LDPIAQFSIPIVTHMNKDHADDTKRIVEKAIGINV-ESARIIDLDTLGLNVQVVFQSKPI 187
           +DPIAQF+ PI  HMN+DHAD TK I EK++G+ V E A+++ +D LG N++     KP+
Sbjct: 159 VDPIAQFTAPIAGHMNRDHADQTKSIAEKSLGVKVIEYAKMLQVDRLGFNIEAGHDGKPV 218

Query: 188 KLRVPFPRPAQDRKDVKNLIVQMLKG 265
           KLR+PFPRPAQDRKDVKNLIV++L+G
Sbjct: 219 KLRIPFPRPAQDRKDVKNLIVELLQG 244


>tr|Q8LDU1|Q8LDU1_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 321

 Score =  108 bits (270), Expect = 2e-22
 Identities = 52/86 (60%), Positives = 64/86 (74%)
 Frame = +2

Query: 5   ANLDPIAQFSIPIVTHMNKDHADDTKRIVEKAIGINVESARIIDLDTLGLNVQVVFQSKP 184
           A +DPIAQ++ P+ +HMNKDH +DTK IV     I VESA ++DLD+LG NV+   Q   
Sbjct: 231 AKVDPIAQYAKPVTSHMNKDHEEDTKAIVHNITSIPVESALMLDLDSLGFNVKATLQGNT 290

Query: 185 IKLRVPFPRPAQDRKDVKNLIVQMLK 262
            KLRVPFPR AQDRKDVK LIV+ML+
Sbjct: 291 FKLRVPFPRRAQDRKDVKTLIVEMLQ 316


>tr|Q9M7D2|Q9M7D2_PEA Root border cell-specific protein OS=Pisum
           sativum GN=BRD13 PE=2 SV=1
          Length = 325

 Score =  107 bits (268), Expect = 4e-22
 Identities = 51/86 (59%), Positives = 65/86 (75%)
 Frame = +2

Query: 5   ANLDPIAQFSIPIVTHMNKDHADDTKRIVEKAIGINVESARIIDLDTLGLNVQVVFQSKP 184
           A +DPI+QFS P+ +HMNKDH +DTK IV+    + V+ A I+DLD LG NV+  F+   
Sbjct: 234 AKVDPISQFSKPVASHMNKDHGEDTKMIVQHWTSVPVDFADILDLDRLGFNVKAGFKGDT 293

Query: 185 IKLRVPFPRPAQDRKDVKNLIVQMLK 262
            KLRVPFPRPA+DRKDVK LIV+ML+
Sbjct: 294 FKLRVPFPRPAEDRKDVKTLIVEMLQ 319


>tr|Q6ZL16|Q6ZL16_ORYSJ Os07g0573800 protein OS=Oryza sativa subsp.
           japonica GN=OJ1699_E05.22-1 PE=2 SV=1
          Length = 342

 Score =  106 bits (265), Expect = 9e-22
 Identities = 49/86 (56%), Positives = 67/86 (77%)
 Frame = +2

Query: 5   ANLDPIAQFSIPIVTHMNKDHADDTKRIVEKAIGINVESARIIDLDTLGLNVQVVFQSKP 184
           A +DPI+QFS PI +HMNKDH+DDTK IV+ +  + V+ A ++D+D+LG NV+  +    
Sbjct: 247 AKVDPISQFSTPITSHMNKDHSDDTKLIVQYSTTVKVDFAYMLDVDSLGFNVKAGYDGSV 306

Query: 185 IKLRVPFPRPAQDRKDVKNLIVQMLK 262
           +KLR+PFPR AQDRKDVK LIV+ML+
Sbjct: 307 LKLRIPFPRRAQDRKDVKTLIVEMLQ 332


>tr|B8B7Q6|B8B7Q6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26573 PE=4 SV=1
          Length = 339

 Score =  106 bits (265), Expect = 9e-22
 Identities = 49/86 (56%), Positives = 67/86 (77%)
 Frame = +2

Query: 5   ANLDPIAQFSIPIVTHMNKDHADDTKRIVEKAIGINVESARIIDLDTLGLNVQVVFQSKP 184
           A +DPI+QFS PI +HMNKDH+DDTK IV+ +  + V+ A ++D+D+LG NV+  +    
Sbjct: 244 AKVDPISQFSTPITSHMNKDHSDDTKLIVQYSTTVKVDFAYMLDVDSLGFNVKAGYDGSV 303

Query: 185 IKLRVPFPRPAQDRKDVKNLIVQMLK 262
           +KLR+PFPR AQDRKDVK LIV+ML+
Sbjct: 304 LKLRIPFPRRAQDRKDVKTLIVEMLQ 329


>tr|B6SUB0|B6SUB0_MAIZE Root border cell-specific protein OS=Zea
           mays PE=2 SV=1
          Length = 338

 Score =  106 bits (265), Expect = 9e-22
 Identities = 49/86 (56%), Positives = 67/86 (77%)
 Frame = +2

Query: 5   ANLDPIAQFSIPIVTHMNKDHADDTKRIVEKAIGINVESARIIDLDTLGLNVQVVFQSKP 184
           A +DPI+QFS PI +HMNKDHA+DTK IV+ +  + V+ A ++D+D+LG NV+  +    
Sbjct: 243 AKVDPISQFSTPITSHMNKDHANDTKLIVQHSTTVKVDFAYMLDVDSLGFNVKAGYDGSV 302

Query: 185 IKLRVPFPRPAQDRKDVKNLIVQMLK 262
           +KLR+PFPR AQDRKDVK LIV+ML+
Sbjct: 303 LKLRIPFPRQAQDRKDVKTLIVEMLQ 328


>tr|B4G1W4|B4G1W4_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 273

 Score =  106 bits (265), Expect = 9e-22
 Identities = 49/86 (56%), Positives = 67/86 (77%)
 Frame = +2

Query: 5   ANLDPIAQFSIPIVTHMNKDHADDTKRIVEKAIGINVESARIIDLDTLGLNVQVVFQSKP 184
           A +DPI+QFS PI +HMNKDHA+DTK IV+ +  + V+ A ++D+D+LG NV+  +    
Sbjct: 178 AKVDPISQFSTPITSHMNKDHANDTKLIVQHSTTVKVDFAYMLDVDSLGFNVKAGYDGSV 237

Query: 185 IKLRVPFPRPAQDRKDVKNLIVQMLK 262
           +KLR+PFPR AQDRKDVK LIV+ML+
Sbjct: 238 LKLRIPFPRQAQDRKDVKTLIVEMLQ 263


>tr|A7PW46|A7PW46_VITVI Chromosome chr8 scaffold_34, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00025470001
           PE=4 SV=1
          Length = 279

 Score =  105 bits (261), Expect = 3e-21
 Identities = 48/86 (55%), Positives = 66/86 (76%)
 Frame = +2

Query: 5   ANLDPIAQFSIPIVTHMNKDHADDTKRIVEKAIGINVESARIIDLDTLGLNVQVVFQSKP 184
           A +DPIAQFS P+ +HMN+DHA+DTK IV+    I V+SA ++DLD+LG  V+  ++   
Sbjct: 187 AKVDPIAQFSKPVASHMNRDHAEDTKLIVQHVTSILVDSAYMLDLDSLGFYVKATYRGNA 246

Query: 185 IKLRVPFPRPAQDRKDVKNLIVQMLK 262
            KLR+PFPR A+DRKDVK L+V+ML+
Sbjct: 247 FKLRIPFPRRAEDRKDVKTLVVEMLQ 272


>tr|Q2XPX4|Q2XPX4_SOLTU Root border cell-specific protein-like
           protein OS=Solanum tuberosum PE=2 SV=1
          Length = 321

 Score =  100 bits (250), Expect = 5e-20
 Identities = 49/86 (56%), Positives = 64/86 (74%)
 Frame = +2

Query: 5   ANLDPIAQFSIPIVTHMNKDHADDTKRIVEKAIGINVESARIIDLDTLGLNVQVVFQSKP 184
           A +DPI QFS PI +HMNKDH +DTK IV+ +  + V+ A I+D+D+LG NV+  ++   
Sbjct: 232 AKVDPIYQFSKPITSHMNKDHTEDTKLIVQHSKSVPVDFAYILDVDSLGFNVKACYKDTD 291

Query: 185 IKLRVPFPRPAQDRKDVKNLIVQMLK 262
            KLRVPFPR A DRKDVK LIV+ML+
Sbjct: 292 FKLRVPFPRRAVDRKDVKALIVEMLQ 317


>tr|A3BLE3|A3BLE3_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_023865 PE=4 SV=1
          Length = 348

 Score =  100 bits (248), Expect = 8e-20
 Identities = 49/92 (53%), Positives = 67/92 (72%), Gaps = 6/92 (6%)
 Frame = +2

Query: 5   ANLDPIAQFSIPIVTHMNKDHADDTKRIVEKAIGIN------VESARIIDLDTLGLNVQV 166
           A +DPI+QFS PI +HMNKDH+DDTK IV+ +  +       V+ A ++D+D+LG NV+ 
Sbjct: 247 AKVDPISQFSTPITSHMNKDHSDDTKLIVQYSTTVKANKPSQVDFAYMLDVDSLGFNVKA 306

Query: 167 VFQSKPIKLRVPFPRPAQDRKDVKNLIVQMLK 262
            +    +KLR+PFPR AQDRKDVK LIV+ML+
Sbjct: 307 GYDGSVLKLRIPFPRRAQDRKDVKTLIVEMLQ 338