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NBDC - LSDB Archive
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DK945798
Clone id YMU02A01NGRL0010_H18
Library
Length 565
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_H18. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AGAGCTCCAGATTAGCAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCCAT
CTCCATAGCCGCTTCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTC
AAAGAGCTTCTCTGGTCTCAAGGCCACTACCCTGTTCGCCCCCTAGAGCCCCAACCCGCT
CGCCATCTCTGATGGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAA
GAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGT
GGACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGT
GTACCGAGAGCACTTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAA
GCTGCCCATGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGC
CAAGGAGTATCCTGAAGCCTTCATCCGCGTGCTGGGCTTTGACGCTGAGAGGCACGTGCA
GGTCTCCGGCTTCCTTGTCCAGAAG
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 155
Score (bit) 176.0
E-value 7.0e-44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945798|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_H18, 5'
         (565 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   176   7e-44
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   174   4e-43
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   172   8e-43
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   172   1e-42
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   171   2e-42
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   171   3e-42
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   171   3e-42
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   170   4e-42
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   170   4e-42
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   170   4e-42
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   170   5e-42
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   170   5e-42
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   170   5e-42
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   169   7e-42
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   169   7e-42
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   169   9e-42
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   169   1e-41
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   168   1e-41
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   168   1e-41
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   168   1e-41
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   168   2e-41
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   168   2e-41
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   168   2e-41
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   168   2e-41
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   168   2e-41
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   167   3e-41
sp|O24634|RBS1_FRIAG Ribulose bisphosphate carboxylase small cha...   166   6e-41
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   166   6e-41
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   166   7e-41
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   166   7e-41

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  176 bits (446), Expect = 7e-44
 Identities = 84/155 (54%), Positives = 107/155 (69%), Gaps = 5/155 (3%)
 Frame = +2

Query: 116 LSKSFSGLKATTLF--AP*SPNPLAI--SDGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 283
           L+  F+GLK+   F     + N  +   S+G RV  M VW P   KK+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 284 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 460
            ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V+
Sbjct: 82  ALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 461 REIAECAKEYPEAFIRVLGFDAERHVQVSGFLVQK 565
           +E+ EC KEYP AFIRV+GFD  R VQ   F+V K
Sbjct: 142 KEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAK 176


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  174 bits (440), Expect = 4e-43
 Identities = 81/147 (55%), Positives = 101/147 (68%)
 Frame = +2

Query: 125 SFSGLKATTLFAP*SPNPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 304
           S +    T  FA  S  P   S+G RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD
Sbjct: 31  SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 305 FMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAK 484
           +++R GW PCIEF K+G VYRE+ +  GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K
Sbjct: 88  YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSK 147

Query: 485 EYPEAFIRVLGFDAERHVQVSGFLVQK 565
            YP+ F R++GFD  R VQ   FL  K
Sbjct: 148 AYPDYFNRIIGFDNTRQVQCISFLTYK 174


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  172 bits (437), Expect = 8e-43
 Identities = 78/127 (61%), Positives = 96/127 (75%), Gaps = 1/127 (0%)
 Frame = +2

Query: 188 SDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 364
           S+G RV  M VW P   KKFETLSYLPPLSSEQ+AK+VD+++RK   PC+EF+ + G VY
Sbjct: 52  SNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVY 111

Query: 365 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAERHVQV 544
           REH    GYYDGRYW MWKLPMFGC D++ VL+E+ EC K YP AFIR++GFD +R VQ+
Sbjct: 112 REHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQI 171

Query: 545 SGFLVQK 565
             F+  K
Sbjct: 172 ISFIAYK 178


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  172 bits (435), Expect = 1e-42
 Identities = 81/155 (52%), Positives = 104/155 (67%), Gaps = 8/155 (5%)
 Frame = +2

Query: 125 SFSGLKATTLF--------AP*SPNPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 280
           +F+GLK+T  F        A         S+G RV  M VW P+ N KFETLSYLP L+ 
Sbjct: 15  AFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTE 74

Query: 281 EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 460
           EQ+ K+V++++R  W PC+EFD  GS+ R++    GYYDGRYWVMWKLPMFGC +A+ V+
Sbjct: 75  EQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVI 134

Query: 461 REIAECAKEYPEAFIRVLGFDAERHVQVSGFLVQK 565
            E+ ECAK YP+AFIRV+GFD  R VQ   F+V K
Sbjct: 135 NEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHK 169


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
          Length = 187

 Score =  171 bits (434), Expect = 2e-42
 Identities = 81/152 (53%), Positives = 103/152 (67%), Gaps = 5/152 (3%)
 Frame = +2

Query: 125 SFSGLKATTLFAP*SPNPLAI----SDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIA 292
           SF+GLK+   F       L I    S+G RV  MLVW P + KK+ETLSYLP LS EQ+ 
Sbjct: 25  SFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLL 84

Query: 293 KQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREI 469
           K+++++++KGW PC+EF+ + G VYREH    GYYDGRYW MWKLPMFGC DA  VL E+
Sbjct: 85  KEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEV 144

Query: 470 AECAKEYPEAFIRVLGFDAERHVQVSGFLVQK 565
            E  K YP+A+IR++GFD  R VQ   F+  K
Sbjct: 145 QEAKKAYPQAWIRIIGFDNVRQVQCISFIAYK 176


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score =  171 bits (432), Expect = 3e-42
 Identities = 81/151 (53%), Positives = 107/151 (70%), Gaps = 4/151 (2%)
 Frame = +2

Query: 116 LSKSFSGLKATTLFAP*SPN---PLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQ 286
           L+  F+GLK++  F     N       S+GSRV+ M VW P   KKFETLSYLPPL+ EQ
Sbjct: 21  LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80

Query: 287 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           + K+V++++RKGW PC+EF+ + G V+R++    GYYDGRYW MW+LP+FG  DAA VL+
Sbjct: 81  LLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLK 140

Query: 464 EIAECAKEYPEAFIRVLGFDAERHVQVSGFL 556
           E+AEC  EYPEAFIR++GFD  R VQ   F+
Sbjct: 141 EVAECKAEYPEAFIRIIGFDNVRQVQCISFI 171


>sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small chain
           2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1
          Length = 180

 Score =  171 bits (432), Expect = 3e-42
 Identities = 80/150 (53%), Positives = 102/150 (68%), Gaps = 4/150 (2%)
 Frame = +2

Query: 128 FSGLKATTLFAP*SPNP---LAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 298
           F+GLK+T  F     N       S+G RV  M VW   + K++ETLSYLPPL+++Q+A+Q
Sbjct: 27  FTGLKSTVGFPATKKNDDITSLASNGGRVQCMKVWPTQNMKRYETLSYLPPLTTDQLARQ 86

Query: 299 VDFMVRKGWTPCIEFDKI-GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 475
           VD+++   W PC+EF+   G VYREH +  GYYDGRYW MWKLPMFGC D A VL E+ E
Sbjct: 87  VDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEE 146

Query: 476 CAKEYPEAFIRVLGFDAERHVQVSGFLVQK 565
           C KEYP AFIR++GFD+ R VQ   F+  K
Sbjct: 147 CKKEYPNAFIRIIGFDSNRQVQCVSFIAYK 176


>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1
          Length = 189

 Score =  170 bits (431), Expect = 4e-42
 Identities = 75/126 (59%), Positives = 95/126 (75%)
 Frame = +2

Query: 188 SDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 367
           S+GSRV  M VW PY NKKFETLSYLP L+ EQ+ K+V+++++  W PC+EF++ G + R
Sbjct: 60  SNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKR 119

Query: 368 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAERHVQVS 547
            + +  GYYDGRYWVMWKLPMFGC +A+ VL E+ ECAK YP AFIRV+GFD  R VQ  
Sbjct: 120 VYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCI 179

Query: 548 GFLVQK 565
            F+V K
Sbjct: 180 SFIVHK 185


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  170 bits (431), Expect = 4e-42
 Identities = 82/150 (54%), Positives = 103/150 (68%), Gaps = 4/150 (2%)
 Frame = +2

Query: 128 FSGLKATTLFAP*--SPNPLAI--SDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 295
           F+GL+++  F     + N L+   S+G RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 296 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 475
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 476 CAKEYPEAFIRVLGFDAERHVQVSGFLVQK 565
             K YPE F+R++GFD +R VQ   F+  K
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  170 bits (431), Expect = 4e-42
 Identities = 82/150 (54%), Positives = 103/150 (68%), Gaps = 4/150 (2%)
 Frame = +2

Query: 128 FSGLKATTLFAP*--SPNPLAI--SDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 295
           F+GL+++  F     + N L+   S+G RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 296 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 475
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 476 CAKEYPEAFIRVLGFDAERHVQVSGFLVQK 565
             K YPE F+R++GFD +R VQ   F+  K
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 150
Score (bit) 276.0
E-value 7.0e-73
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945798|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_H18, 5'
         (565 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   276   7e-73
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   192   1e-47
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   189   1e-46
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   188   2e-46
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   188   2e-46
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   188   2e-46
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   187   5e-46
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   181   2e-44
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   180   4e-44
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   180   6e-44
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   178   2e-43
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   177   4e-43
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   177   5e-43
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   176   8e-43
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   176   8e-43
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   175   1e-42
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   175   2e-42
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   175   2e-42
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   174   2e-42
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   174   3e-42
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   174   3e-42
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c...   174   3e-42
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c...   174   3e-42
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   174   3e-42
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c...   173   5e-42
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   173   7e-42
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   173   7e-42
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c...   172   1e-41
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c...   172   1e-41
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c...   172   1e-41

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  276 bits (705), Expect = 7e-73
 Identities = 128/150 (85%), Positives = 141/150 (94%)
 Frame = +2

Query: 116 LSKSFSGLKATTLFAP*SPNPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 295
           LSKSFSGLKA TLFAP   NPLAIS+GSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 296 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 475
           QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAE
Sbjct: 82  QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAE 141

Query: 476 CAKEYPEAFIRVLGFDAERHVQVSGFLVQK 565
           CAKEYP AFIRVLGFDA+R VQV+GFLV+K
Sbjct: 142 CAKEYPTAFIRVLGFDAKRQVQVAGFLVKK 171


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  192 bits (487), Expect = 1e-47
 Identities = 90/151 (59%), Positives = 112/151 (74%), Gaps = 3/151 (1%)
 Frame = +2

Query: 122 KSFSGLKATTLFAP*SPNPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K FSGLK+TTLFA  +    ++ +GSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 472
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 473 ECAKEYPEAFIRVLGFDAERHVQVSGFLVQK 565
           EC + +P  ++RVLGFD+++ VQ+ GFLV +
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVAR 177


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  189 bits (479), Expect = 1e-46
 Identities = 89/151 (58%), Positives = 111/151 (73%), Gaps = 3/151 (1%)
 Frame = +2

Query: 122 KSFSGLKATTLFAP*SPNPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K FSGLK+TTL A  +    ++ +GSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 472
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 473 ECAKEYPEAFIRVLGFDAERHVQVSGFLVQK 565
           EC + +P  ++RVLGFD+++ VQ+ GFLV +
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVAR 177


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  188 bits (477), Expect = 2e-46
 Identities = 86/151 (56%), Positives = 112/151 (74%), Gaps = 3/151 (1%)
 Frame = +2

Query: 122 KSFSGLKATTLFAP*SPNPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K+FSGLK+ TLF+  +    ++ +GSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 472
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 473 ECAKEYPEAFIRVLGFDAERHVQVSGFLVQK 565
           EC  ++P  ++RVLGFD+++ VQ+ GFLV +
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSR 212


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  188 bits (477), Expect = 2e-46
 Identities = 87/151 (57%), Positives = 110/151 (72%), Gaps = 3/151 (1%)
 Frame = +2

Query: 122 KSFSGLKATTLFAP*SPNPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K+FSGLK+ TLF   S    ++ +GSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 472
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 473 ECAKEYPEAFIRVLGFDAERHVQVSGFLVQK 565
           EC   YP  ++RVLGFD+++ VQ+ GFLV +
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFLVAR 182


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  188 bits (477), Expect = 2e-46
 Identities = 87/151 (57%), Positives = 111/151 (73%), Gaps = 3/151 (1%)
 Frame = +2

Query: 122 KSFSGLKATTLFAP*SPNPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K+FSGLK  TLF+  +    A+ +GSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 472
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 473 ECAKEYPEAFIRVLGFDAERHVQVSGFLVQK 565
           EC  ++P  ++RVLGFD+++ VQ+ GFLV +
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSR 182


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  187 bits (474), Expect = 5e-46
 Identities = 85/151 (56%), Positives = 112/151 (74%), Gaps = 3/151 (1%)
 Frame = +2

Query: 122 KSFSGLKATTLFAP*SPNPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K+FSGLK+ TLF+  +    ++ +GSRV  M VW P    KFET SYLPPL+ ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 472
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 473 ECAKEYPEAFIRVLGFDAERHVQVSGFLVQK 565
           EC  ++P  ++RVLGFD+++ VQ+ GFLV +
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFLVSR 181


>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_123666 PE=3 SV=1
          Length = 181

 Score =  181 bits (460), Expect = 2e-44
 Identities = 85/148 (57%), Positives = 106/148 (71%)
 Frame = +2

Query: 122 KSFSGLKATTLFAP*SPNPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K+FSGLK+ TLF+  S    ++ +GSRV+ M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 481
           ++M+++   PC+EFD    V RE+    GYYDGRYW MWKLPMFGCQD+A VLREI EC 
Sbjct: 92  EYMIQQKLIPCLEFDNSKGVTRENNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 482 KEYPEAFIRVLGFDAERHVQVSGFLVQK 565
           K +P  F+RVLGFD  + VQ+ GFLV +
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVAR 179


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  180 bits (457), Expect = 4e-44
 Identities = 83/148 (56%), Positives = 105/148 (70%)
 Frame = +2

Query: 122 KSFSGLKATTLFAP*SPNPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K+FSGLK+ T+F+  + N  ++ +GSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 481
           ++M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD+A VLREI EC 
Sbjct: 92  EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 482 KEYPEAFIRVLGFDAERHVQVSGFLVQK 565
           K +P  F+RVLGFD  + VQ+ GFLV +
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVAR 179


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score =  180 bits (456), Expect = 6e-44
 Identities = 84/148 (56%), Positives = 105/148 (70%)
 Frame = +2

Query: 122 KSFSGLKATTLFAP*SPNPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K+FSGLK++TLF+  + +  ++ +GSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 481
           D+M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD A VLREI EC 
Sbjct: 92  DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151

Query: 482 KEYPEAFIRVLGFDAERHVQVSGFLVQK 565
           K +P  F+RVLGFD  + VQ+ GFLV +
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVAR 179