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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945803
Clone id YMU02A01NGRL0010_H24
Library
Length 373
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_H24. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GGAGGTCTTAGAGGTGTACTCGGGTCCTCCGACTGTGGCATTCAAGTGGAGGCATTGGGG
TATGATGGAGGGGCCCTTCAAAGGACATGCTCCAACAAACGATGTTGTTGAGTCTATTGG
CACTTGTATCGCAAAGGTGGATGAGAGCTTGAGAATTACGGATTTGGAGGTTTATTATGA
TCCGACTCAATTCTTGGGACAACTAATGAAAGGGGCCAAATCTCCTCAGTATGTTTACAA
GCCGGGGACAATAGGCTGCCCTTTCAATAAGACTGATCATTCTGTGTGAGGAGTGTTTTG
TAAAGTTCACAATACTAATATTAAGGTGGTTTATTATTTTTTGAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P16273
Definition sp|P16273|PRPX_HORVU Pathogen-related protein OS=Hordeum vulgare
Align length 89
Score (bit) 77.4
E-value 2.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945803|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_H24, 5'
         (343 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P16273|PRPX_HORVU Pathogen-related protein OS=Hordeum vulgare...    77   2e-14
sp|Q10258|MTHR1_SCHPO Methylenetetrahydrofolate reductase 1 OS=S...    29   6.4  
sp|P12681|PGTP_SALTY Phosphoglycerate transporter protein OS=Sal...    29   8.3  
sp|Q1MNC1|HIS4_RHIL3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam...    29   8.3  
sp|Q2KE60|HIS4_RHIEC 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam...    29   8.3  
sp|Q29M42|C2D1_DROPS Coiled-coil and C2 domain-containing protei...    29   8.3  

>sp|P16273|PRPX_HORVU Pathogen-related protein OS=Hordeum vulgare
           PE=2 SV=2
          Length = 235

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 38/89 (42%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
 Frame = +2

Query: 2   EVLEVYSGP--PTVAFKWRHWGMMEGPFKGHAPTNDVVESIGTCIAKVDESLRITDLEVY 175
           EVL+VYS P  P +AFK+RHWG MEGPFKGH P    VE  G C+  VDE  ++   E +
Sbjct: 146 EVLDVYSSPSAPRIAFKFRHWGYMEGPFKGHPPHGGRVEFFGVCVFHVDEDTKVEKAEFF 205

Query: 176 YDPTQFLGQLMKGAKSPQYVYKPGTIGCP 262
           Y+   FL   +    +          GCP
Sbjct: 206 YERGNFLASFLTAPAA-----SASASGCP 229


>sp|Q10258|MTHR1_SCHPO Methylenetetrahydrofolate reductase 1
           OS=Schizosaccharomyces pombe GN=met9 PE=1 SV=1
          Length = 603

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +2

Query: 80  KGHAPTNDVVESIGTCIAKVDESLRITDLEVYYDPTQFLGQLMK 211
           +G++P +D+ ESI     KVDE       +++YD   F+  + K
Sbjct: 155 EGYSPDDDIDESIKHLKLKVDEGADFIVTQMFYDVDNFIAWVDK 198


>sp|P12681|PGTP_SALTY Phosphoglycerate transporter protein
           OS=Salmonella typhimurium GN=pgtP PE=2 SV=2
          Length = 463

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
 Frame = +1

Query: 4   GLRGV--------LGSSDCGIQVEALGYDGGALQRTCSNKRCC*VYWHLYRKGG*ELENY 159
           GLRG         LG+S  G+ V+ LG+ GG          CC ++ +L  +G  ELE  
Sbjct: 388 GLRGFMSYIFGASLGTSLFGVMVDKLGWYGG-FYLLMGGIVCCILFCYLSHRGALELERQ 446

Query: 160 GFGGLL*SDSI 192
               L   DS+
Sbjct: 447 RQNALHNQDSL 457


>sp|Q1MNC1|HIS4_RHIL3
           1-(5-phosphoribosyl)-5-[(5-
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase OS=Rhizobium
           leguminosarum bv. viciae (strain 3841) GN=hisA PE=3 SV=1
          Length = 248

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 41  FKWRHWGMMEGPFKGHAPTNDVVESI 118
           F+W H   ++G F GH+   D VE+I
Sbjct: 44  FEWLHVVDLDGAFAGHSANGDAVEAI 69


>sp|Q2KE60|HIS4_RHIEC
           1-(5-phosphoribosyl)-5-[(5-
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase OS=Rhizobium etli
           (strain CFN 42 / ATCC 51251) GN=hisA PE=3 SV=2
          Length = 248

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 41  FKWRHWGMMEGPFKGHAPTNDVVESI 118
           F+W H   ++G F GH+   D VE+I
Sbjct: 44  FEWLHVVDLDGAFAGHSANGDAVEAI 69


>sp|Q29M42|C2D1_DROPS Coiled-coil and C2 domain-containing protein
           1-like OS=Drosophila pseudoobscura pseudoobscura
           GN=GA18377 PE=3 SV=2
          Length = 814

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +1

Query: 115 YWHLYRKGG*ELENYGFGGLL*SDSILGTTNERGQ 219
           +  ++++ G +LE Y  GG L SD ++GT N + Q
Sbjct: 726 FQRIFKRHGVKLEIYSRGGFLRSDILIGTVNVKLQ 760
tr_hit_id A9SV45
Definition tr|A9SV45|A9SV45_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 89
Score (bit) 124.0
E-value 3.0e-27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945803|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_H24, 5'
         (343 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SV45|A9SV45_PHYPA Predicted protein OS=Physcomitrella paten...   124   3e-27
tr|A9P1K4|A9P1K4_PICSI Putative uncharacterized protein OS=Picea...   117   4e-25
tr|Q94EA3|Q94EA3_ORYSJ Putative infection-related protein (Os01g...   105   1e-21
tr|A2ZXI6|A2ZXI6_ORYSJ Putative uncharacterized protein OS=Oryza...   105   1e-21
tr|A2WUS2|A2WUS2_ORYSI Putative uncharacterized protein OS=Oryza...   105   1e-21
tr|Q94EA4|Q94EA4_ORYSJ cDNA clone:001-206-D09, full insert seque...   104   2e-21
tr|A7P212|A7P212_VITVI Chromosome chr19 scaffold_4, whole genome...   104   2e-21
tr|A5BUS4|A5BUS4_VITVI Putative uncharacterized protein OS=Vitis...   104   2e-21
tr|A2WUS0|A2WUS0_ORYSI Putative uncharacterized protein OS=Oryza...   104   2e-21
tr|B6U3F5|B6U3F5_MAIZE Pathogen-related protein OS=Zea mays PE=2...   102   1e-20
tr|Q9ZV96|Q9ZV96_ARATH F9K20.18 protein OS=Arabidopsis thaliana ...   100   3e-20
tr|Q8L9B0|Q8L9B0_ARATH Pathogenesis-related protein-like protein...   100   3e-20
tr|Q3E6X3|Q3E6X3_ARATH Uncharacterized protein At1g78780.1 OS=Ar...   100   3e-20
tr|A8MS14|A8MS14_ARATH Uncharacterized protein At1g78780.4 OS=Ar...   100   3e-20
tr|Q3MBH2|Q3MBH2_ANAVT Pathogenesis related protein-like OS=Anab...   100   5e-20
tr|Q8Z081|Q8Z081_ANASP All0217 protein OS=Anabaena sp. (strain P...    99   1e-19
tr|Q3M9L5|Q3M9L5_ANAVT Pathogenesis related protein-like OS=Anab...    99   1e-19
tr|B2J447|B2J447_NOSP7 Pathogenesis related protein-like protein...    98   2e-19
tr|A7NSJ1|A7NSJ1_VITVI Chromosome chr18 scaffold_1, whole genome...    97   4e-19
tr|A5BRQ4|A5BRQ4_VITVI Putative uncharacterized protein OS=Vitis...    97   4e-19
tr|Q2HSC5|Q2HSC5_MEDTR Pathogen-related protein, related OS=Medi...    97   5e-19
tr|Q2HSD5|Q2HSD5_MEDTR Pathogen-related protein, related OS=Medi...    96   9e-19
tr|A8YLP2|A8YLP2_MICAE Genome sequencing data, contig C326 OS=Mi...    95   2e-18
tr|Q700J9|Q700J9_CUCSA Putative pathogenesis-related protein OS=...    94   3e-18
tr|Q8YNE7|Q8YNE7_ANASP Alr4619 protein OS=Anabaena sp. (strain P...    93   8e-18
tr|Q0RGH1|Q0RGH1_FRAAA Putative uncharacterized protein OS=Frank...    93   8e-18
tr|A9PIM1|A9PIM1_POPJC Putative uncharacterized protein OS=Popul...    92   1e-17
tr|A7NSJ0|A7NSJ0_VITVI Chromosome chr18 scaffold_1, whole genome...    91   2e-17
tr|A0ZAC9|A0ZAC9_NODSP Pathogenesis related protein-like protein...    89   1e-16
tr|B6TQA1|B6TQA1_MAIZE Pathogen-related protein OS=Zea mays PE=2...    88   2e-16

>tr|A9SV45|A9SV45_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_135849 PE=4 SV=1
          Length = 246

 Score =  124 bits (310), Expect = 3e-27
 Identities = 58/89 (65%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
 Frame = +2

Query: 2   EVLEVYSGPPTVAFKWRHWGMMEGPFKGHAPTNDVVESIGTCIAKVDESLRITDLEVYYD 181
           EV  VYS PP V  K+RHWG+MEGPFKGHAPT  VV+SIG C+AKVDE+L+I +LEVYYD
Sbjct: 151 EVQAVYSPPPVVVMKFRHWGVMEGPFKGHAPTGAVVDSIGICVAKVDENLKIVELEVYYD 210

Query: 182 PTQFLGQLMKGAKSPQY-VYKPGTIGCPF 265
              FLG L KG K+  Y VY+ GT GCP+
Sbjct: 211 SAAFLGGLTKGPKAESYTVYQKGTEGCPY 239


>tr|A9P1K4|A9P1K4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 253

 Score =  117 bits (292), Expect = 4e-25
 Identities = 52/89 (58%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
 Frame = +2

Query: 2   EVLEVYSGPPTVAFKWRHWGMMEGPFKGHAPTNDVVESIGTCIAKVDESLRITDLEVYYD 181
           EV++VY+GPP V FK+RHWG+MEGPFKGH PT + V+ IG  IAKV+E +RI ++EVYYD
Sbjct: 156 EVVQVYTGPPLVTFKFRHWGVMEGPFKGHKPTGETVQFIGIAIAKVNEEMRIVEVEVYYD 215

Query: 182 PTQFLGQLMKGAKSPQY-VYKPGTIGCPF 265
           P +  G L++G     Y  YK GT GCPF
Sbjct: 216 PAELCGGLLRGLVEKSYGEYKKGTEGCPF 244


>tr|Q94EA3|Q94EA3_ORYSJ Putative infection-related protein
           (Os01g0731600 protein) OS=Oryza sativa subsp. japonica
           GN=P0435H01.37 PE=4 SV=1
          Length = 264

 Score =  105 bits (262), Expect = 1e-21
 Identities = 45/71 (63%), Positives = 54/71 (76%)
 Frame = +2

Query: 2   EVLEVYSGPPTVAFKWRHWGMMEGPFKGHAPTNDVVESIGTCIAKVDESLRITDLEVYYD 181
           EV+ VYSGPP + FK+RHWG M+GP+KGHAPT D VE  G  + KVDE LR  D+EVYYD
Sbjct: 147 EVIRVYSGPPVITFKFRHWGHMDGPYKGHAPTGDKVEFYGVAVLKVDEQLRAEDVEVYYD 206

Query: 182 PTQFLGQLMKG 214
           P + LG L+KG
Sbjct: 207 PGELLGDLLKG 217


>tr|A2ZXI6|A2ZXI6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_003258 PE=4 SV=1
          Length = 277

 Score =  105 bits (262), Expect = 1e-21
 Identities = 45/71 (63%), Positives = 54/71 (76%)
 Frame = +2

Query: 2   EVLEVYSGPPTVAFKWRHWGMMEGPFKGHAPTNDVVESIGTCIAKVDESLRITDLEVYYD 181
           EV+ VYSGPP + FK+RHWG M+GP+KGHAPT D VE  G  + KVDE LR  D+EVYYD
Sbjct: 160 EVIRVYSGPPVITFKFRHWGHMDGPYKGHAPTGDKVEFYGVAVLKVDEQLRAEDVEVYYD 219

Query: 182 PTQFLGQLMKG 214
           P + LG L+KG
Sbjct: 220 PGELLGDLLKG 230


>tr|A2WUS2|A2WUS2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_03629 PE=4 SV=1
          Length = 264

 Score =  105 bits (262), Expect = 1e-21
 Identities = 45/71 (63%), Positives = 54/71 (76%)
 Frame = +2

Query: 2   EVLEVYSGPPTVAFKWRHWGMMEGPFKGHAPTNDVVESIGTCIAKVDESLRITDLEVYYD 181
           EV+ VYSGPP + FK+RHWG M+GP+KGHAPT D VE  G  + KVDE LR  D+EVYYD
Sbjct: 147 EVIRVYSGPPVITFKFRHWGHMDGPYKGHAPTGDKVEFYGVAVLKVDEQLRAEDVEVYYD 206

Query: 182 PTQFLGQLMKG 214
           P + LG L+KG
Sbjct: 207 PGELLGDLLKG 217


>tr|Q94EA4|Q94EA4_ORYSJ cDNA clone:001-206-D09, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0435H01.33 PE=2 SV=1
          Length = 266

 Score =  104 bits (260), Expect = 2e-21
 Identities = 45/71 (63%), Positives = 54/71 (76%)
 Frame = +2

Query: 2   EVLEVYSGPPTVAFKWRHWGMMEGPFKGHAPTNDVVESIGTCIAKVDESLRITDLEVYYD 181
           EV+ VYSGPP + FK+RHWG M+GP+KGHAPT D VE  G  + KVDE LR  D+EVYYD
Sbjct: 149 EVIRVYSGPPVITFKFRHWGHMDGPYKGHAPTGDKVEFYGVAVLKVDEQLRAEDVEVYYD 208

Query: 182 PTQFLGQLMKG 214
           P + LG L+KG
Sbjct: 209 PGELLGGLLKG 219


>tr|A7P212|A7P212_VITVI Chromosome chr19 scaffold_4, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00027832001
           PE=4 SV=1
          Length = 166

 Score =  104 bits (260), Expect = 2e-21
 Identities = 46/89 (51%), Positives = 61/89 (68%)
 Frame = +2

Query: 2   EVLEVYSGPPTVAFKWRHWGMMEGPFKGHAPTNDVVESIGTCIAKVDESLRITDLEVYYD 181
           EV+ VYSGPP +A+K+RHWG  EGPFKGHAPT ++ +  G  I KVDESLR+ + E+YYD
Sbjct: 81  EVISVYSGPPEIAYKFRHWGFFEGPFKGHAPTGEMAQFYGLGILKVDESLRVEEAEIYYD 140

Query: 182 PTQFLGQLMKGAKSPQYVYKPGTIGCPFN 268
           P +  G L+KG      +  P +  CPF+
Sbjct: 141 PAELFGGLLKGPP----ISAPPSHACPFS 165


>tr|A5BUS4|A5BUS4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_026996 PE=4 SV=1
          Length = 236

 Score =  104 bits (260), Expect = 2e-21
 Identities = 46/89 (51%), Positives = 61/89 (68%)
 Frame = +2

Query: 2   EVLEVYSGPPTVAFKWRHWGMMEGPFKGHAPTNDVVESIGTCIAKVDESLRITDLEVYYD 181
           EV+ VYSGPP +A+K+RHWG  EGPFKGHAPT ++ +  G  I KVDESLR+ + E+YYD
Sbjct: 151 EVISVYSGPPEIAYKFRHWGFFEGPFKGHAPTGEMAQFYGLGILKVDESLRVEEAEIYYD 210

Query: 182 PTQFLGQLMKGAKSPQYVYKPGTIGCPFN 268
           P +  G L+KG      +  P +  CPF+
Sbjct: 211 PAELFGGLLKGPP----ISAPPSHACPFS 235


>tr|A2WUS0|A2WUS0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_03627 PE=4 SV=1
          Length = 266

 Score =  104 bits (260), Expect = 2e-21
 Identities = 45/71 (63%), Positives = 54/71 (76%)
 Frame = +2

Query: 2   EVLEVYSGPPTVAFKWRHWGMMEGPFKGHAPTNDVVESIGTCIAKVDESLRITDLEVYYD 181
           EV+ VYSGPP + FK+RHWG M+GP+KGHAPT D VE  G  + KVDE LR  D+EVYYD
Sbjct: 149 EVIRVYSGPPVITFKFRHWGHMDGPYKGHAPTGDKVEFYGVAVLKVDEQLRAEDVEVYYD 208

Query: 182 PTQFLGQLMKG 214
           P + LG L+KG
Sbjct: 209 PGELLGGLLKG 219


>tr|B6U3F5|B6U3F5_MAIZE Pathogen-related protein OS=Zea mays PE=2
           SV=1
          Length = 256

 Score =  102 bits (254), Expect = 1e-20
 Identities = 45/73 (61%), Positives = 55/73 (75%)
 Frame = +2

Query: 2   EVLEVYSGPPTVAFKWRHWGMMEGPFKGHAPTNDVVESIGTCIAKVDESLRITDLEVYYD 181
           EVL+VYSGPP +AFK+RHWG  EGP+KGHA T D V+  G  + KVD+ LR  D+EVYYD
Sbjct: 149 EVLKVYSGPPLLAFKFRHWGHKEGPYKGHAXTGDKVZFFGVAVLKVDDELRAEDVEVYYD 208

Query: 182 PTQFLGQLMKGAK 220
           P + LG L+KG K
Sbjct: 209 PGELLGGLLKGPK 221