DK945811
Clone id YMU02A01NGRL0010_I08
Library
Length 597
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_I08. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
AGCTGGAGCACTATTATGAGGTTGACAGAGAGGCCAAAAGAATACTGGAGGCATGTTACA
GTCGAGCACAAAAGATTGTGGAAAGGAATGAAGTGCTGATAAAGGAGTTGGCGGATCTCT
TGATGGATGCCAAAGTTGTGAAGAAAGAGGATTTCTGGATACTGGCGGAGCAACACGGCA
ACTTTCTAGAGCTTCCCCCTCTACTTGTGGATATTCGCCGAAAGAAGCTAGAAGAGTTTA
GAGAGCAAATGATTACGGAGAAAAGGGCAGTTTTGCCGTAACGATAAGACAAAAGAATCT
AGGTACACAATTTTTGTAGCAGGAACGTAAACCCCACTTTGGATCGGGCGGAGCAACAGG
CAGCTGAGAGTCGGTGTCGATAACTAGCATGTTTTTCTGAAGAGGGCAGTTGGGTGGCCC
TTATTTCAGAAGATGGATGCAGACATGAGCAGGGTGCATATGTACTGTAGCCTGCTGATA
CAAGGGAACTTCTCATGGAAAACAGCTCANATCATTGCCCCAATTAAGAGGGCTACTAGC
TTTGGGGTGCTTGGAAGTGGTAGTTTGGAATAAGTTGTTTAGGTCTACAGAGTTCCT
■■Homology search results ■■ -
sp_hit_id P51327
Definition sp|P51327|FTSH_PORPU Cell division protease ftsH homolog OS=Porphyra purpurea
Align length 52
Score (bit) 41.2
E-value 0.004
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945811|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_I08, 5'
(597 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P51327|FTSH_PORPU Cell division protease ftsH homolog OS=Porp... 41 0.004
sp|P73179|FTSH2_SYNY3 Cell division protease ftsH homolog 2 OS=S... 41 0.005
sp|Q1XDF9|FSTH_PORYE Cell division protease ftsH homolog OS=Porp... 39 0.020
sp|P37476|FTSH_BACSU Cell division protease ftsH homolog OS=Baci... 39 0.026
sp|O78516|FTSH_GUITH Cell division protease ftsH homolog OS=Guil... 37 0.058
sp|Q5Z974|FTSH1_ORYSJ Cell division protease ftsH homolog 1, chl... 37 0.058
sp|Q9BAE0|FTSH_MEDSA Cell division protease ftsH homolog, chloro... 35 0.37
sp|O82150|FTSH_TOBAC Cell division protease ftsH homolog, chloro... 34 0.49
sp|P94304|FTSH_BACPF Cell division protease ftsH homolog OS=Baci... 34 0.49
sp|Q39102|FTSH1_ARATH Cell division protease ftsH homolog 1, chl... 34 0.49
sp|P49825|FTSH_ODOSI Cell division protease ftsH homolog OS=Odon... 33 0.83
sp|O67077|FTSH_AQUAE Cell division protease ftsH homolog OS=Aqui... 33 1.1
sp|Q6AXT4|CJ096_RAT UPF0628 protein C10orf96 homolog OS=Rattus n... 32 1.9
sp|Q8NAB5|YC005_HUMAN Putative uncharacterized protein FLJ35645 ... 32 2.4
sp|Q55700|FTSH1_SYNY3 Cell division protease ftsH homolog 1 OS=S... 32 2.4
sp|Q9NQ11|AT132_HUMAN Probable cation-transporting ATPase 13A2 O... 32 2.5
sp|A2A8T7|CA223_MOUSE Uncharacterized protein C1orf223 homolog O... 31 4.2
sp|Q98PE4|FTSH_MYCPU Cell division protease ftsH homolog OS=Myco... 31 5.4
sp|Q810N9|CJ096_MOUSE UPF0628 protein C10orf96 homolog OS=Mus mu... 31 5.4
sp|Q63618|ESPN_RAT Espin OS=Rattus norvegicus GN=Espn PE=1 SV=2 30 7.1
sp|Q9ET47|ESPN_MOUSE Espin OS=Mus musculus GN=Espn PE=1 SV=2 30 7.1
sp|Q47YH9|ZIPA_COLP3 Cell division protein zipA homolog OS=Colwe... 30 7.1
sp|Q76KD6|SPERI_HUMAN Speriolin OS=Homo sapiens GN=SPATC1 PE=2 SV=2 30 7.1
sp|Q74ZX0|CSF1_ASHGO Protein CSF1 OS=Ashbya gossypii GN=CSF1 PE=... 30 7.1
sp|P0C7P5|BNP_TRIFL Bradykinin-potentiating and C-type natriuret... 30 7.1

>sp|P51327|FTSH_PORPU Cell division protease ftsH homolog
OS=Porphyra purpurea GN=ftsH PE=3 SV=1
Length = 628

Score = 41.2 bits (95), Expect = 0.004
Identities = 15/52 (28%), Positives = 34/52 (65%)
Frame = +3

Query: 21 VDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDFWILAEQH 176
+D++ + I+ CY A+KIV+ N V++ L DLL++ + ++ +F + +++
Sbjct: 564 IDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEFRHIVKEY 615


>sp|P73179|FTSH2_SYNY3 Cell division protease ftsH homolog 2
OS=Synechocystis sp. (strain PCC 6803) GN=slr1390 PE=3
SV=1
Length = 665

Score = 40.8 bits (94), Expect = 0.005
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +3

Query: 21 VDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDFWILAEQHGNFLELPP 200
+DRE + I+ A + RA +I+E N L+ L D L+D + ++ E F L E + + P
Sbjct: 602 IDREIQAIVTAAHQRATRIIEENRNLMDLLVDALIDQETIEGEHFRQLVESYQQSQKQPA 661

Query: 201 L 203
L
Sbjct: 662 L 662


>sp|Q1XDF9|FSTH_PORYE Cell division protease ftsH homolog
OS=Porphyra yezoensis GN=ftsH PE=3 SV=1
Length = 628

Score = 38.9 bits (89), Expect = 0.020
Identities = 14/52 (26%), Positives = 34/52 (65%)
Frame = +3

Query: 21 VDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDFWILAEQH 176
+D++ + I+ CY++A+ I+ N V+I L DLL++ + ++ +F + +++
Sbjct: 564 IDKQVREIVSECYAQAKHIIIDNRVVIDRLVDLLIEKETIEGNEFRDIVKEY 615


>sp|P37476|FTSH_BACSU Cell division protease ftsH homolog
OS=Bacillus subtilis GN=ftsH PE=3 SV=1
Length = 637

Score = 38.5 bits (88), Expect = 0.026
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +3

Query: 15 YEVDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDFWILAEQHGNFLE 191
YE+D+E +RI++ CY RA++I+ N ++ +A L+ + + E L + HG E
Sbjct: 551 YEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLID-HGTLPE 608


>sp|O78516|FTSH_GUITH Cell division protease ftsH homolog
OS=Guillardia theta GN=ftsH PE=3 SV=1
Length = 631

Score = 37.4 bits (85), Expect = 0.058
Identities = 16/59 (27%), Positives = 36/59 (61%)
Frame = +3

Query: 21 VDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDFWILAEQHGNFLELP 197
+D + + I++ C++ +I++ N V+I +L DLL++ + + ++F + G+F LP
Sbjct: 564 IDMQVRAIIQHCHTETVQIIKDNRVVIDKLVDLLIEKETIDGDEFRQIV---GDFTSLP 619


>sp|Q5Z974|FTSH1_ORYSJ Cell division protease ftsH homolog 1,
chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1
PE=2 SV=1
Length = 686

Score = 37.4 bits (85), Expect = 0.058
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +3

Query: 21 VDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDFWIL 164
VD E + ++E YSRA +I+ + ++ +LA LLM+ + V E+F L
Sbjct: 628 VDAEVRELVEKAYSRATQIITTHIDILHKLAQLLMEKETVDGEEFMSL 675


>sp|Q9BAE0|FTSH_MEDSA Cell division protease ftsH homolog,
chloroplastic OS=Medicago sativa GN=FTSH PE=2 SV=1
Length = 706

Score = 34.7 bits (78), Expect = 0.37
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +3

Query: 21 VDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDFWIL 164
VD+E + +++ Y RA +I+ + ++ +LA LL++ + V E+F L
Sbjct: 648 VDKEVRELVDKAYERATQIINTHIDILHKLAQLLIEKETVDGEEFMSL 695


>sp|O82150|FTSH_TOBAC Cell division protease ftsH homolog,
chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2
Length = 714

Score = 34.3 bits (77), Expect = 0.49
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +3

Query: 21 VDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDFWIL 164
VD E + ++E Y RA +I+ + ++ +LA LL++ + V E+F L
Sbjct: 649 VDAEVRELVERAYERATEIITTHIDILHKLAQLLIEKETVDGEEFMSL 696


>sp|P94304|FTSH_BACPF Cell division protease ftsH homolog
OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1
Length = 679

Score = 34.3 bits (77), Expect = 0.49
Identities = 15/53 (28%), Positives = 31/53 (58%)
Frame = +3

Query: 15 YEVDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDFWILAEQ 173
+E+D E +RI++ CY+R ++I+ N+ + +A L+D + + E L +
Sbjct: 556 HEIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLDAEQIKSLVHE 608


>sp|Q39102|FTSH1_ARATH Cell division protease ftsH homolog 1,
chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2
Length = 716

Score = 34.3 bits (77), Expect = 0.49
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +3

Query: 21 VDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDFWIL 164
VD E + ++E Y RA +I+ + ++ +LA LL++ + V E+F L
Sbjct: 658 VDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSL 705


tr_hit_id A7P762
Definition tr|A7P762|A7P762_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera
Align length 86
Score (bit) 73.2
E-value 1.0e-11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945811|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_I08, 5'
(597 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7P762|A7P762_VITVI Chromosome chr9 scaffold_7, whole genome ... 73 1e-11
tr|A9SCI8|A9SCI8_PHYPA Predicted protein OS=Physcomitrella paten... 63 1e-08
tr|A8MPR5|A8MPR5_ARATH Uncharacterized protein At3g16290.1 OS=Ar... 62 2e-08
tr|Q3AFJ8|Q3AFJ8_CARHZ Cell division protein FtsH OS=Carboxydoth... 46 0.001
tr|Q9ZGE1|Q9ZGE1_HELMO ATP-dependent zinc metallopeptidase FtsH ... 45 0.002
tr|B6FPP8|B6FPP8_9CLOT Putative uncharacterized protein OS=Clost... 45 0.003
tr|B0NEV6|B0NEV6_EUBSP Putative uncharacterized protein OS=Clost... 44 0.005
tr|B3PLQ3|B3PLQ3_CELJU Cell division protein FtsH OS=Cellvibrio ... 44 0.007
tr|Q251Q2|Q251Q2_DESHY Putative uncharacterized protein OS=Desul... 44 0.009
tr|A6BI46|A6BI46_9FIRM Putative uncharacterized protein OS=Dorea... 44 0.009
tr|Q6B8Y9|Q6B8Y9_GRATL FtsH protease homolog OS=Gracilaria tenui... 44 0.009
tr|B8FZD0|B8FZD0_DESHD ATP-dependent metalloprotease FtsH OS=Des... 43 0.016
tr|A3XG20|A3XG20_9FLAO Putative transmembrane AAA-metalloproteas... 43 0.016
tr|Q2JQW6|Q2JQW6_SYNJA Metalloprotease, ATP-dependent, FtsH fami... 42 0.020
tr|Q10ZF7|Q10ZF7_TRIEI FtsH peptidase homologue, chloroplast. Me... 42 0.020
tr|Q1VXE4|Q1VXE4_9FLAO Putative transmembrane AAA-metalloproteas... 42 0.020
tr|B7JX36|B7JX36_SYNP8 ATP-dependent metalloprotease FtsH OS=Syn... 42 0.020
tr|B4C2Y2|B4C2Y2_9CHRO ATP-dependent metalloprotease FtsH OS=Cya... 42 0.020
tr|Q0VSS8|Q0VSS8_ALCBS Cell division protein FtsH OS=Alcanivorax... 42 0.027
tr|B0CEU6|B0CEU6_ACAM1 ATP-dependent metalloprotease FtsH-like p... 42 0.027
tr|Q26BJ7|Q26BJ7_9BACT AAA-metalloprotease FtsH OS=Flavobacteria... 42 0.027
tr|A4CPA1|A4CPA1_9FLAO Putative transmembrane AAA-metalloproteas... 42 0.027
tr|B7T1V0|B7T1V0_VAULI Putative cell division protein FtsH OS=Va... 42 0.027
tr|B5CNR4|B5CNR4_9FIRM Putative uncharacterized protein OS=Rumin... 42 0.035
tr|A3IKL7|A3IKL7_9CHRO Cell division protein; FtsH OS=Cyanothece... 41 0.046
tr|Q2JHR8|Q2JHR8_SYNJB Metalloprotease, ATP-dependent, FtsH fami... 41 0.059
tr|A7Z0J2|A7Z0J2_BACA2 FtsH OS=Bacillus amyloliquefaciens (strai... 41 0.059
tr|B7BS18|B7BS18_9CLOT Putative uncharacterized protein OS=Clost... 41 0.059
tr|B0G9E6|B0G9E6_9FIRM Putative uncharacterized protein OS=Dorea... 41 0.059
tr|A7B667|A7B667_RUMGN Putative uncharacterized protein OS=Rumin... 41 0.059

>tr|A7P762|A7P762_VITVI Chromosome chr9 scaffold_7, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034338001
PE=4 SV=1
Length = 830

Score = 73.2 bits (178), Expect = 1e-11
Identities = 33/86 (38%), Positives = 59/86 (68%)
Frame = +3

Query: 18 EVDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDFWILAEQHGNFLELP 197
++D EA RILE CY RA++I+++N L+ + D L+ K + K++F+ L E HG+ +P
Sbjct: 741 DIDLEALRILEVCYERAKEILKQNRKLMDAVVDELVQKKSLTKQEFFRLVEVHGSLKPMP 800

Query: 198 PLLVDIRRKKLEEFREQMITEKRAVL 275
P ++DIR K +F+E+M++++ A +
Sbjct: 801 PNILDIRAAKRIQFQERMMSQREAAV 826


>tr|A9SCI8|A9SCI8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_210834 PE=4 SV=1
Length = 802

Score = 62.8 bits (151), Expect = 1e-08
Identities = 31/89 (34%), Positives = 52/89 (58%)
Frame = +3

Query: 6 EHYYEVDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDFWILAEQHGNF 185
E VD EA +I+ CY R + ++RN L+ ++ + L+ +V+++ +F L +GN
Sbjct: 712 ESVQSVDVEALKIVNQCYDRVLEYLKRNRTLVNKMVEALVKDRVIRQVEFSQLVSTYGNL 771

Query: 186 LELPPLLVDIRRKKLEEFREQMITEKRAV 272
P V+IR + L F+E MITEKR++
Sbjct: 772 DPPPSTPVEIRDRSLAAFQEAMITEKRSI 800


>tr|A8MPR5|A8MPR5_ARATH Uncharacterized protein At3g16290.1
OS=Arabidopsis thaliana GN=At3g16290 PE=4 SV=1
Length = 876

Score = 62.0 bits (149), Expect = 2e-08
Identities = 28/79 (35%), Positives = 51/79 (64%)
Frame = +3

Query: 18 EVDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDFWILAEQHGNFLELP 197
++D EA RIL CY RA++I+ RN L+ E+ + L+ K + K++F+ L E +G+ +P
Sbjct: 787 DIDVEALRILNMCYERAKEILGRNRTLMDEVVEKLVQKKSLTKQEFFTLVELYGSSKPMP 846

Query: 198 PLLVDIRRKKLEEFREQMI 254
P ++++R+ K E E ++
Sbjct: 847 PSILELRKIKRLELEEMVL 865


>tr|Q3AFJ8|Q3AFJ8_CARHZ Cell division protein FtsH
OS=Carboxydothermus hydrogenoformans (strain Z-2901 /
DSM 6008) GN=ftsH PE=4 SV=1
Length = 619

Score = 46.2 bits (108), Expect = 0.001
Identities = 18/55 (32%), Positives = 41/55 (74%)
Frame = +3

Query: 15 YEVDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDFWILAEQHG 179
Y +D+E ++I+++CYSRA++I+++N ++ +A LM+ + ++ E+F L +++G
Sbjct: 547 YTIDKEVRKIIDSCYSRAEEILKKNINVLHLVATKLMEVETMEGEEFEKLMKENG 601


>tr|Q9ZGE1|Q9ZGE1_HELMO ATP-dependent zinc metallopeptidase FtsH
OS=Heliobacillus mobilis GN=ftsH PE=4 SV=1
Length = 601

Score = 45.4 bits (106), Expect = 0.002
Identities = 18/47 (38%), Positives = 32/47 (68%)
Frame = +3

Query: 15 YEVDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDF 155
+ +D+EA+RI+E CY +A+KI+E N + +A LMD + ++ +F
Sbjct: 547 FSIDKEARRIIEECYGKAKKILESNADKLHLIAQTLMDKETIEASEF 593


>tr|B6FPP8|B6FPP8_9CLOT Putative uncharacterized protein
OS=Clostridium nexile DSM 1787 GN=CLONEX_02115 PE=4 SV=1
Length = 605

Score = 45.1 bits (105), Expect = 0.003
Identities = 16/52 (30%), Positives = 38/52 (73%)
Frame = +3

Query: 18 EVDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDFWILAEQ 173
++DRE K+I++ CY+ A++I+++ +++ ADLL++ + + +E+F L ++
Sbjct: 549 KIDREVKKIIDECYANAKEIIQKYNHVLESCADLLLEKEKITREEFSALFDE 600


>tr|B0NEV6|B0NEV6_EUBSP Putative uncharacterized protein
OS=Clostridium scindens ATCC 35704 GN=CLOSCI_01995 PE=4
SV=1
Length = 614

Score = 44.3 bits (103), Expect = 0.005
Identities = 16/45 (35%), Positives = 34/45 (75%)
Frame = +3

Query: 21 VDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDF 155
+D+E KRI++ CYSRA+ I+++ + ++ A+LL++ + + +E+F
Sbjct: 559 IDQEVKRIIDECYSRARHIIKKYDDVLHSCAELLLEKEKISREEF 603


>tr|B3PLQ3|B3PLQ3_CELJU Cell division protein FtsH OS=Cellvibrio
japonicus (strain Ueda107) GN=ftsH PE=4 SV=1
Length = 637

Score = 43.9 bits (102), Expect = 0.007
Identities = 17/43 (39%), Positives = 31/43 (72%)
Frame = +3

Query: 21 VDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKE 149
+D E +RI++ACY+RA+KI+E N +++ + D LM+ + + E
Sbjct: 546 IDEEVRRIIDACYTRARKILEDNRDILEAMKDALMEYETIDAE 588


>tr|Q251Q2|Q251Q2_DESHY Putative uncharacterized protein
OS=Desulfitobacterium hafniense (strain Y51) GN=DSY0201
PE=4 SV=1
Length = 657

Score = 43.5 bits (101), Expect = 0.009
Identities = 15/47 (31%), Positives = 33/47 (70%)
Frame = +3

Query: 15 YEVDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDF 155
Y +D+EA+R+++ CY +AQ I++ N + +A+ LM+ + ++ ++F
Sbjct: 546 YSIDKEARRMIDECYLKAQTIIQENMHKLNAIAETLMEKETIEAKEF 592


>tr|A6BI46|A6BI46_9FIRM Putative uncharacterized protein OS=Dorea
longicatena DSM 13814 GN=DORLON_01975 PE=4 SV=1
Length = 510

Score = 43.5 bits (101), Expect = 0.009
Identities = 16/45 (35%), Positives = 32/45 (71%)
Frame = +3

Query: 21 VDREAKRILEACYSRAQKIVERNEVLIKELADLLMDAKVVKKEDF 155
+D+E KRI++ CY RA+ I+ + + ++ ADLL++ + + +E+F
Sbjct: 455 IDQEVKRIIDECYDRARHIIRKYDDVLHACADLLLEKEKISREEF 499