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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945828
Clone id YMU02A01NGRL0010_J07
Library
Length 427
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_J07. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
AGAGTTTCGACTTTAAACTGGAGATTATTCAGCACAATGTACGATTCTTTCTGGAGATTT
TACAAAATCGAAAGTCTGACACATTAGAGTGGATCATTATTCTTCTTATTGCGGGGGAAA
TATGTGTCAGCTTGTATGAAATTTTACATGGAAGTGGTGTTGTATAAGTGGACCTTGCCT
GATGGAGTCCCTCAATTCGGCTCACAGATCAGCGTATTTAGCATGCCTTTCAACCCCATA
CAAGCTAAGGCAGAAATCACTGTACATTTTTGTGGAAGGCGCATAAACTTTTGGGAAATG
GTGTGGTCAACAAAAGATCTCTACCAGACAATGTACAGCGAACTAGTGAACTGATAACAT
AGAATCAATCAATCCAATCAGACATTGATTCTGTCACAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA
■■Homology search results ■■ -
sp_hit_id Q05648
Definition sp|Q05648|YD282_YEAST Uncharacterized protein YDR282C OS=Saccharomyces cerevisiae
Align length 41
Score (bit) 37.7
E-value 0.018
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945828|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_J07, 5'
         (397 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q05648|YD282_YEAST Uncharacterized protein YDR282C OS=Sacchar...    38   0.018
sp|O94477|MYO52_SCHPO Myosin-52 OS=Schizosaccharomyces pombe GN=...    32   1.3  
sp|Q5RB40|HMHA1_PONAB Minor histocompatibility protein HA-1 OS=P...    31   1.7  
sp|Q92619|HMHA1_HUMAN Minor histocompatibility protein HA-1 OS=H...    31   1.7  
sp|Q86C51|TXL1_ORNHU Huwenlectin-1 OS=Ornithoctonus huwena PE=1 ...    31   2.2  
sp|P65196|ISPZ_NEIMB Probable intracellular septation protein OS...    30   4.9  
sp|P65195|ISPZ_NEIMA Probable intracellular septation protein OS...    30   4.9  
sp|Q03441|RMD1_YEAST Sporulation protein RMD1 OS=Saccharomyces c...    30   4.9  
sp|O43091|DPS1_SCHPO Decaprenyl-diphosphate synthase subunit 1 O...    30   4.9  
sp|Q9V3C5|RIC1_DROME Protein RIC1 homolog OS=Drosophila melanoga...    29   8.3  
sp|O59793|BIS1_SCHPO Stress response protein bis1 OS=Schizosacch...    29   8.3  

>sp|Q05648|YD282_YEAST Uncharacterized protein YDR282C
           OS=Saccharomyces cerevisiae GN=YDR282C PE=3 SV=1
          Length = 414

 Score = 37.7 bits (86), Expect = 0.018
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +3

Query: 15  KLEIIQHNVRFFLEILQNRKSDTLEWIIILLIAGEICVSLY 137
           KL+      R  + +L  R S  LEWIII LIA E+C  +Y
Sbjct: 352 KLDYSTDECRALISLLNERNSTFLEWIIIYLIAFELCFEIY 392


>sp|O94477|MYO52_SCHPO Myosin-52 OS=Schizosaccharomyces pombe GN=myo52
            PE=1 SV=1
          Length = 1516

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = +1

Query: 13   LNWRLFSTMYDSFWRFYKIESLTH*SGSLFFLLRGKYVSACMKFYMEVVLYKWTLPDGVP 192
            +N+ +++ +  S +RF  +E+      SLF   RG +       Y   VL  W L  GVP
Sbjct: 1305 VNYEIYNALIRSIYRFINVEAFN----SLFIDERGSWKRGTNISYNYHVLKDWCLESGVP 1360

Query: 193  Q 195
            +
Sbjct: 1361 E 1361


>sp|Q5RB40|HMHA1_PONAB Minor histocompatibility protein HA-1
           OS=Pongo abelii GN=HMHA1 PE=2 SV=1
          Length = 1163

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 167 SGPCLMESLNSAHRSAYLACLSTPYKLRQKSLYIFVEGA 283
           SGP   E L+ A R+  L  L TP K R+ + Y++ +GA
Sbjct: 715 SGPFRHEGLSKAARTHRLRKLRTPAKCRECNSYVYFQGA 753


>sp|Q92619|HMHA1_HUMAN Minor histocompatibility protein HA-1 OS=Homo
           sapiens GN=HMHA1 PE=1 SV=2
          Length = 1136

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 167 SGPCLMESLNSAHRSAYLACLSTPYKLRQKSLYIFVEGA 283
           SGP   E L+ A R+  L  L TP K R+ + Y++ +GA
Sbjct: 688 SGPFRHEGLSKAARTHRLRKLRTPAKCRECNSYVYFQGA 726


>sp|Q86C51|TXL1_ORNHU Huwenlectin-1 OS=Ornithoctonus huwena PE=1
           SV=1
          Length = 83

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 86  RVDHYSSYCGGNMCQLV*NFTWKWCCISGP 175
           + D+ +  C G +C      TWKWC ++GP
Sbjct: 55  KCDYNNGCCSGYVCSR----TWKWCVLAGP 80


>sp|P65196|ISPZ_NEIMB Probable intracellular septation protein
           OS=Neisseria meningitidis serogroup B GN=ispZ PE=3 SV=1
          Length = 176

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = +1

Query: 16  NWRLFSTMYDSFWRFYKIESLTH*SGSLFFLLRGKYVSACMK 141
           NW +F T ++S W  YK+   T     +FF+++G Y+S C+K
Sbjct: 134 NWFVF-TRFESQWVNYKMFGSTALM-LVFFIIQGIYLSTCLK 173


>sp|P65195|ISPZ_NEIMA Probable intracellular septation protein
           OS=Neisseria meningitidis serogroup A GN=ispZ PE=3 SV=1
          Length = 176

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = +1

Query: 16  NWRLFSTMYDSFWRFYKIESLTH*SGSLFFLLRGKYVSACMK 141
           NW +F T ++S W  YK+   T     +FF+++G Y+S C+K
Sbjct: 134 NWFVF-TRFESQWVNYKMFGSTALM-LVFFIIQGIYLSTCLK 173


>sp|Q03441|RMD1_YEAST Sporulation protein RMD1 OS=Saccharomyces
           cerevisiae GN=RMD1 PE=1 SV=1
          Length = 430

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = +3

Query: 15  KLEIIQHNVRFFLEILQNRKSDTLEWIIILLIAGEICVSLYEIL 146
           +LE+I   ++   E L +   + LE+I+ILL+  E+ +S+  I+
Sbjct: 379 RLEVISDLLQMLKEQLGHSHEEYLEFIVILLVGVEVLISVINIV 422


>sp|O43091|DPS1_SCHPO Decaprenyl-diphosphate synthase subunit 1
           OS=Schizosaccharomyces pombe GN=dps1 PE=1 SV=1
          Length = 378

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 267 FLWKAHKLLGNGVVNKRSLPDNVQRTSELIT*NQSIQSDI 386
           F WK +  LG  +VN+ + P ++QR   L+    +I+  I
Sbjct: 301 FAWKKYPELGAMIVNRFNHPSDIQRARSLVECTDAIEQTI 340


>sp|Q9V3C5|RIC1_DROME Protein RIC1 homolog OS=Drosophila
           melanogaster GN=CG9063 PE=1 SV=1
          Length = 1429

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 12/81 (14%)
 Frame = +1

Query: 103 FLLRGKYVSACMKFYMEVVLYKWTLPDGVPQFGS-----QISVFSMPFNPIQAKAEITVH 267
           F+ +   +S  +K Y  VVL+   +  GV    +     Q+S FS+PF  ++ K++I +H
Sbjct: 753 FMSKRIMLSFPLKLYPLVVLFDNVIVLGVENESTLYANEQVSHFSLPFAVMERKSQIYLH 812

Query: 268 FCGRRI-------NFWEMVWS 309
              R++       + WEM  S
Sbjct: 813 KVLRQLIKRNLGYSAWEMAQS 833
tr_hit_id A9S4X7
Definition tr|A9S4X7|A9S4X7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 54
Score (bit) 89.4
E-value 8.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945828|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_J07, 5'
         (397 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S4X7|A9S4X7_PHYPA Predicted protein OS=Physcomitrella paten...    89   8e-17
tr|A9SDH3|A9SDH3_PHYPA Predicted protein (Fragment) OS=Physcomit...    89   1e-16
tr|A7PIB4|A7PIB4_VITVI Chromosome chr13 scaffold_17, whole genom...    74   4e-12
tr|B8LLH3|B8LLH3_PICSI Putative uncharacterized protein OS=Picea...    74   5e-12
tr|Q017C3|Q017C3_OSTTA [S] KOG2861 Uncharacterized conserved pro...    69   9e-11
tr|A4RYT8|A4RYT8_OSTLU Predicted protein OS=Ostreococcus lucimar...    69   9e-11
tr|B4FHR3|B4FHR3_MAIZE Putative uncharacterized protein OS=Zea m...    67   3e-10
tr|Q6Z3Y1|Q6Z3Y1_ORYSJ Os07g0694800 protein OS=Oryza sativa subs...    67   4e-10
tr|A3BNR3|A3BNR3_ORYSJ Putative uncharacterized protein OS=Oryza...    67   4e-10
tr|A2YQ91|A2YQ91_ORYSI Putative uncharacterized protein OS=Oryza...    67   4e-10
tr|Q5JN20|Q5JN20_ORYSJ Putative uncharacterized protein P0403C05...    65   1e-09
tr|A2WVD5|A2WVD5_ORYSI Putative uncharacterized protein OS=Oryza...    65   1e-09
tr|Q9FNB2|Q9FNB2_ARATH Gb|AAF67764.1 (At5g13610/MSH12_7) OS=Arab...    65   2e-09
tr|Q8LCH7|Q8LCH7_ARATH Putative uncharacterized protein OS=Arabi...    64   5e-09
tr|A7PN86|A7PN86_VITVI Chromosome chr1 scaffold_22, whole genome...    61   2e-08
tr|Q8LG43|Q8LG43_ARATH Putative uncharacterized protein OS=Arabi...    60   4e-08
tr|Q9C565|Q9C565_ARATH Putative uncharacterized protein F10D13.7...    59   1e-07
tr|B8BPW3|B8BPW3_THAPS Predicted protein OS=Thalassiosira pseudo...    53   9e-06
tr|B5Y410|B5Y410_PHATR Predicted protein OS=Phaeodactylum tricor...    49   2e-04
tr|B3QSQ3|B3QSQ3_CHLT3 Putative uncharacterized protein OS=Chlor...    44   0.005
tr|Q0EX56|Q0EX56_9PROT Putative uncharacterized protein OS=Marip...    43   0.007
tr|Q8YKE6|Q8YKE6_ANASP Alr7352 protein OS=Anabaena sp. (strain P...    43   0.009
tr|Q3M318|Q3M318_ANAVT Putative uncharacterized protein OS=Anaba...    42   0.012
tr|Q3ASN4|Q3ASN4_CHLCH Putative uncharacterized protein OS=Chlor...    42   0.012
tr|B2IUV1|B2IUV1_NOSP7 Putative uncharacterized protein OS=Nosto...    42   0.015
tr|A7TJ04|A7TJ04_VANPO Putative uncharacterized protein OS=Vande...    41   0.026
tr|Q604L4|Q604L4_METCA Putative uncharacterized protein OS=Methy...    40   0.058
tr|Q30SI1|Q30SI1_SULDN Putative uncharacterized protein OS=Sulfu...    40   0.058
tr|A1HTK9|A1HTK9_9FIRM Putative uncharacterized protein OS=Therm...    39   0.099
tr|A3LUG9|A3LUG9_PICST Predicted protein (Fragment) OS=Pichia st...    39   0.17 

>tr|A9S4X7|A9S4X7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_181343 PE=4 SV=1
          Length = 327

 Score = 89.4 bits (220), Expect = 8e-17
 Identities = 44/54 (81%), Positives = 47/54 (87%)
 Frame = +3

Query: 3   SFDFKLEIIQHNVRFFLEILQNRKSDTLEWIIILLIAGEICVSLYEILHGSGVV 164
           S DFKL IIQHNVRFFLEILQNRKSDTLEWIIILLI GEICV +Y+IL  + VV
Sbjct: 274 SLDFKLNIIQHNVRFFLEILQNRKSDTLEWIIILLITGEICVGVYQILLETNVV 327


>tr|A9SDH3|A9SDH3_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_127991 PE=4 SV=1
          Length = 231

 Score = 89.0 bits (219), Expect = 1e-16
 Identities = 43/54 (79%), Positives = 47/54 (87%)
 Frame = +3

Query: 3   SFDFKLEIIQHNVRFFLEILQNRKSDTLEWIIILLIAGEICVSLYEILHGSGVV 164
           S DFKL IIQHNVRFFLEILQNRKSDTLEWIIILLI GEICV +Y+IL  + V+
Sbjct: 178 SLDFKLNIIQHNVRFFLEILQNRKSDTLEWIIILLITGEICVGVYQILLETNVI 231


>tr|A7PIB4|A7PIB4_VITVI Chromosome chr13 scaffold_17, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00018276001
           PE=4 SV=1
          Length = 396

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 32/53 (60%), Positives = 42/53 (79%)
 Frame = +3

Query: 3   SFDFKLEIIQHNVRFFLEILQNRKSDTLEWIIILLIAGEICVSLYEILHGSGV 161
           S DFKL+ ++HN+RF  EILQNRKSD LEW+II+LI  EI +S+Y+I H S +
Sbjct: 341 SLDFKLKFVEHNIRFLQEILQNRKSDFLEWLIIILIGAEILISVYDIAHKSSI 393


>tr|B8LLH3|B8LLH3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 412

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 32/53 (60%), Positives = 44/53 (83%)
 Frame = +3

Query: 3   SFDFKLEIIQHNVRFFLEILQNRKSDTLEWIIILLIAGEICVSLYEILHGSGV 161
           S DFKL+ ++HNVR+FLEILQNRKSD LEW+II+LI+ EI +++Y I+  S +
Sbjct: 357 SLDFKLKFVEHNVRYFLEILQNRKSDFLEWLIIILISAEIVIAIYNIVRESEI 409


>tr|Q017C3|Q017C3_OSTTA [S] KOG2861 Uncharacterized conserved
           protein OS=Ostreococcus tauri GN=Ot06g02290 PE=4 SV=1
          Length = 343

 Score = 69.3 bits (168), Expect = 9e-11
 Identities = 32/45 (71%), Positives = 40/45 (88%)
 Frame = +3

Query: 9   DFKLEIIQHNVRFFLEILQNRKSDTLEWIIILLIAGEICVSLYEI 143
           D+KL +IQ  V+F+LEILQNRKSD LEWIII+LI+ EICVSLY++
Sbjct: 287 DYKLNLIQTQVKFYLEILQNRKSDALEWIIIVLISLEICVSLYDM 331


>tr|A4RYT8|A4RYT8_OSTLU Predicted protein OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_40884 PE=4 SV=1
          Length = 288

 Score = 69.3 bits (168), Expect = 9e-11
 Identities = 32/45 (71%), Positives = 40/45 (88%)
 Frame = +3

Query: 9   DFKLEIIQHNVRFFLEILQNRKSDTLEWIIILLIAGEICVSLYEI 143
           D+KL +IQ  V+F+LEILQNRKSD LEWIII+LI+ EICVSLY++
Sbjct: 235 DYKLNLIQTQVKFYLEILQNRKSDALEWIIIVLISLEICVSLYDM 279


>tr|B4FHR3|B4FHR3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 185

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 29/48 (60%), Positives = 40/48 (83%)
 Frame = +3

Query: 3   SFDFKLEIIQHNVRFFLEILQNRKSDTLEWIIILLIAGEICVSLYEIL 146
           + DFKL+ ++HN+RF  EILQNRKSD LEW+II+LI+ EI +S+Y I+
Sbjct: 134 NLDFKLKFVEHNIRFLQEILQNRKSDFLEWLIIILISVEILISVYNII 181


>tr|Q6Z3Y1|Q6Z3Y1_ORYSJ Os07g0694800 protein OS=Oryza sativa subsp.
           japonica GN=P0627E10.15 PE=4 SV=1
          Length = 394

 Score = 67.0 bits (162), Expect = 4e-10
 Identities = 29/48 (60%), Positives = 40/48 (83%)
 Frame = +3

Query: 3   SFDFKLEIIQHNVRFFLEILQNRKSDTLEWIIILLIAGEICVSLYEIL 146
           + DFKL+ ++HN+RF  EILQNRKSD LEW+II+LI+ EI +S+Y I+
Sbjct: 343 NLDFKLKFVEHNIRFLQEILQNRKSDFLEWLIIILISVEILISVYNIV 390


>tr|A3BNR3|A3BNR3_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_024685 PE=4 SV=1
          Length = 393

 Score = 67.0 bits (162), Expect = 4e-10
 Identities = 29/48 (60%), Positives = 40/48 (83%)
 Frame = +3

Query: 3   SFDFKLEIIQHNVRFFLEILQNRKSDTLEWIIILLIAGEICVSLYEIL 146
           + DFKL+ ++HN+RF  EILQNRKSD LEW+II+LI+ EI +S+Y I+
Sbjct: 342 NLDFKLKFVEHNIRFLQEILQNRKSDFLEWLIIILISVEILISVYNIV 389


>tr|A2YQ91|A2YQ91_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_27454 PE=4 SV=1
          Length = 278

 Score = 67.0 bits (162), Expect = 4e-10
 Identities = 29/48 (60%), Positives = 40/48 (83%)
 Frame = +3

Query: 3   SFDFKLEIIQHNVRFFLEILQNRKSDTLEWIIILLIAGEICVSLYEIL 146
           + DFKL+ ++HN+RF  EILQNRKSD LEW+II+LI+ EI +S+Y I+
Sbjct: 227 NLDFKLKFVEHNIRFLQEILQNRKSDFLEWLIIILISVEILISVYNIV 274