DK945836
Clone id YMU02A01NGRL0010_J17
Library
Length 318
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_J17. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
ATCTATCAAATCCTGTGCATGGTGGGGATTGGCTGCAACATGTACAACACTAGGCAGCCA
TGCGAGTATGATGTAAACTTGCTCGAGTAGCACTGTTTCTCTATTGTGCTATAGGGAACC
TTCGAAGCTGAATTTGAGTTGTTAAAACTGCACTTAATATAATCAGGGACAAAACTGTAT
ATTATTTGTACAATTATCTGACTAAAGAGTGTCTTATCAAAGCTTGTGATAGGGACTACT
TGTTTTTGTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q89AB3
Definition sp|Q89AB3|EX5B_BUCBP Exodeoxyribonuclease V beta chain OS=Buchnera aphidicola subsp. Baizongia pistaciae
Align length 44
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945836|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_J17, 5'
(250 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q89AB3|EX5B_BUCBP Exodeoxyribonuclease V beta chain OS=Buchne... 30 4.9

>sp|Q89AB3|EX5B_BUCBP Exodeoxyribonuclease V beta chain OS=Buchnera
aphidicola subsp. Baizongia pistaciae GN=recB PE=3 SV=1
Length = 1180

Score = 29.6 bits (65), Expect = 4.9
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = -3

Query: 182 IYSFVPDYIKCSFN----NSNSASKVPYSTIEKQCYSSKFTSYS 63
I S +P+ IK +F N+NS S + Y K Y+ FTSYS
Sbjct: 869 IISEIPNIIKKNFQIPTLNTNSQSLMHYQVSRKFNYNYNFTSYS 912


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945836|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_J17, 5'
(250 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******