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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945841
Clone id YMU02A01NGRL0010_J23
Library
Length 546
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_J23. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTCCTACTTG
CCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAAAAGGCTGG
ACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCCACGGCAGC
GGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCTGCCAAGAT
GCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCGAGGAGTATCCTGAAGCCTTCATC
CGCGTGCTGGGCTTTGACGCTAAGAGGCAGGTGCAGGTCTCCGGCTTCCTTGTCCAGAAG
CCCTCTGTCTAAACTTTCTTAAAGCAAGCCAATTTAGTTGGCATGAATGCCTGCTTCCCA
TTTCCCACTGGCGCCTAACAAGCTTGCTCTTATGAGCTTTTGTGTCCCAGCCACTTTGCA
TACATAATGAAACAACTTCCCAGTGGTGGCTTCACTGCTTAAAAAAAAAAAAAAAAAAAA
AAAAAA
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 120
Score (bit) 170.0
E-value 3.0e-42
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945841|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_J23, 5'
         (520 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   170   3e-42
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   169   6e-42
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   169   6e-42
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   167   4e-41
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   167   4e-41
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   167   4e-41
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   167   4e-41
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   167   4e-41
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   166   6e-41
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   166   8e-41
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   166   8e-41
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   164   2e-40
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   164   2e-40
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   164   2e-40
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   164   3e-40
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   164   3e-40
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   164   3e-40
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   163   5e-40
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   162   7e-40
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   162   7e-40
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   162   7e-40
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai...   162   7e-40
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   162   7e-40
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   162   7e-40
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   162   7e-40
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   162   7e-40
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   162   1e-39
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   162   1e-39
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   161   2e-39
sp|P27985|RBS2_BRANA Ribulose bisphosphate carboxylase small cha...   160   3e-39

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  170 bits (431), Expect = 3e-42
 Identities = 74/120 (61%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
 Frame = +1

Query: 7   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSG 183
           M VW P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VYREH H  G
Sbjct: 58  MKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPG 117

Query: 184 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQKP 363
           YYDGRYW MWKLPMFGC D+A V++E+ EC +EYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 118 YYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  169 bits (429), Expect = 6e-42
 Identities = 72/119 (60%), Positives = 91/119 (76%)
 Frame = +1

Query: 7   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGY 186
           M VW P   KKFETLSYLPPL+ EQ+ ++VD+++R GW PCIEF K+G VYRE+ +  GY
Sbjct: 57  MQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGY 116

Query: 187 YDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQKP 363
           YDGRYW MWKLPMFGC D++ VL+E+ EC++ YP+ F R++GFD  RQVQ   FL  KP
Sbjct: 117 YDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKP 175


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  169 bits (429), Expect = 6e-42
 Identities = 76/120 (63%), Positives = 93/120 (77%), Gaps = 1/120 (0%)
 Frame = +1

Query: 7   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSG 183
           M VW P   KKFETLSYLPPLSSEQ+AK+VD+++RK   PC+EF+ + G VYREH    G
Sbjct: 60  MQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPG 119

Query: 184 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQKP 363
           YYDGRYW MWKLPMFGC D++ VL+E+ EC + YP AFIR++GFD KRQVQ+  F+  KP
Sbjct: 120 YYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  167 bits (422), Expect = 4e-41
 Identities = 74/122 (60%), Positives = 89/122 (72%)
 Frame = +1

Query: 1   SAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGS 180
           S M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+    
Sbjct: 56  SCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASP 115

Query: 181 GYYDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQK 360
           GYYDGRYW MWKLPMFGC DA+ V+ E+ E  + YPE F+R++GFD KRQVQ   F+  K
Sbjct: 116 GYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175

Query: 361 PS 366
           P+
Sbjct: 176 PT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  167 bits (422), Expect = 4e-41
 Identities = 74/122 (60%), Positives = 89/122 (72%)
 Frame = +1

Query: 1   SAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGS 180
           S M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+    
Sbjct: 56  SCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASP 115

Query: 181 GYYDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQK 360
           GYYDGRYW MWKLPMFGC DA+ V+ E+ E  + YPE F+R++GFD KRQVQ   F+  K
Sbjct: 116 GYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175

Query: 361 PS 366
           P+
Sbjct: 176 PT 177


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
          Length = 177

 Score =  167 bits (422), Expect = 4e-41
 Identities = 74/122 (60%), Positives = 89/122 (72%)
 Frame = +1

Query: 1   SAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGS 180
           S M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+    
Sbjct: 56  SCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASP 115

Query: 181 GYYDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQK 360
           GYYDGRYW MWKLPMFGC DA+ V+ E+ E  + YPE F+R++GFD KRQVQ   F+  K
Sbjct: 116 GYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175

Query: 361 PS 366
           P+
Sbjct: 176 PT 177


>sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40A, chloroplastic OS=Lemna gibba GN=SSU40A PE=3 SV=1
          Length = 177

 Score =  167 bits (422), Expect = 4e-41
 Identities = 74/122 (60%), Positives = 89/122 (72%)
 Frame = +1

Query: 1   SAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGS 180
           S M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+    
Sbjct: 56  SCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASP 115

Query: 181 GYYDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQK 360
           GYYDGRYW MWKLPMFGC DA+ V+ E+ E  + YPE F+R++GFD KRQVQ   F+  K
Sbjct: 116 GYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175

Query: 361 PS 366
           P+
Sbjct: 176 PT 177


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
          Length = 177

 Score =  167 bits (422), Expect = 4e-41
 Identities = 74/122 (60%), Positives = 89/122 (72%)
 Frame = +1

Query: 1   SAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGS 180
           S M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+    
Sbjct: 56  SCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASP 115

Query: 181 GYYDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQK 360
           GYYDGRYW MWKLPMFGC DA+ V+ E+ E  + YPE F+R++GFD KRQVQ   F+  K
Sbjct: 116 GYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175

Query: 361 PS 366
           P+
Sbjct: 176 PT 177


>sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU1, chloroplastic OS=Lemna gibba GN=SSU1 PE=2 SV=2
          Length = 173

 Score =  166 bits (420), Expect = 6e-41
 Identities = 74/122 (60%), Positives = 89/122 (72%)
 Frame = +1

Query: 1   SAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGS 180
           S M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+    
Sbjct: 52  SCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENNASP 111

Query: 181 GYYDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQK 360
           GYYDGRYW MWKLPMFGC DA+ V+ E+ E  + YPE F+R++GFD KRQVQ   F+  K
Sbjct: 112 GYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 171

Query: 361 PS 366
           P+
Sbjct: 172 PT 173


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  166 bits (419), Expect = 8e-41
 Identities = 71/119 (59%), Positives = 91/119 (76%)
 Frame = +1

Query: 7   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGY 186
           M VW P+ N KFETLSYLP L+ EQ+ K+V++++R  W PC+EFD  GS+ R++    GY
Sbjct: 52  MQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGY 111

Query: 187 YDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQKP 363
           YDGRYWVMWKLPMFGC +A+ V+ E+ ECA+ YP+AFIRV+GFD  RQVQ   F+V KP
Sbjct: 112 YDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 122
Score (bit) 238.0
E-value 1.0e-61
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945841|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_J23, 5'
         (520 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   238   1e-61
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   173   5e-42
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   173   5e-42
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   172   7e-42
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   172   9e-42
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   171   2e-41
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   171   2e-41
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   171   2e-41
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   170   4e-41
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   169   6e-41
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   169   8e-41
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   169   8e-41
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   169   8e-41
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   169   1e-40
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   168   1e-40
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   167   4e-40
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|A9NL36|A9NL36_PICSI Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|A9NM29|A9NM29_PICSI Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|A9NLD6|A9NLD6_PICSI Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|A9NKU8|A9NKU8_PICSI Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c...   163   4e-39
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   163   4e-39

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  238 bits (607), Expect = 1e-61
 Identities = 107/122 (87%), Positives = 118/122 (96%)
 Frame = +1

Query: 1   SAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGS 180
           SAMLVWKPYDNKKFETLSYLPPL+++QIAKQV++MVRKGWTPCIEFD IGSVYREHFHGS
Sbjct: 52  SAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGS 111

Query: 181 GYYDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQK 360
           GYYDGRYW+MWKLPMFGC D+ +VLREIAECA+EYP AFIRVLGFDAKRQVQV+GFLV+K
Sbjct: 112 GYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVKK 171

Query: 361 PS 366
           PS
Sbjct: 172 PS 173


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  173 bits (438), Expect = 5e-42
 Identities = 78/123 (63%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
 Frame = +1

Query: 7   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG--- 177
           M VW P    KFET SYLPPL+ +QIAKQVDFM+++   PCIEFD +GSV R +F G   
Sbjct: 57  MQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGS 116

Query: 178 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQ 357
           SGYYDGRYW MWKLPMFGC D+A VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV 
Sbjct: 117 SGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVA 176

Query: 358 KPS 366
           +P+
Sbjct: 177 RPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  173 bits (438), Expect = 5e-42
 Identities = 78/123 (63%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
 Frame = +1

Query: 7   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG--- 177
           M VW P    KFET SYLPPL+ +QIAKQVDFM+++   PCIEFD +GSV R +F G   
Sbjct: 57  MQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGS 116

Query: 178 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQ 357
           SGYYDGRYW MWKLPMFGC D+A VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV 
Sbjct: 117 SGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVA 176

Query: 358 KPS 366
           +P+
Sbjct: 177 RPN 179


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  172 bits (437), Expect = 7e-42
 Identities = 74/120 (61%), Positives = 93/120 (77%), Gaps = 1/120 (0%)
 Frame = +1

Query: 7   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSG 183
           M VW P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VYREH H  G
Sbjct: 58  MKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPG 117

Query: 184 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQKP 363
           YYDGRYW MWKLPMFGC D+A V++E+ EC +EYP AFIRV+GFD+ RQVQ   F+V KP
Sbjct: 118 YYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  172 bits (436), Expect = 9e-42
 Identities = 73/119 (61%), Positives = 91/119 (76%)
 Frame = +1

Query: 7   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGY 186
           M  W P +NKKFE LSYLPPLS + IAK++D+M++KGW PC+EFD++GSV REH    GY
Sbjct: 50  MKTWNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVRREHSRMPGY 109

Query: 187 YDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQKP 363
           YDGRYW +WKLPMFGC D++ VL EI EC + YP+A+IR L FD K Q Q   F++QKP
Sbjct: 110 YDGRYWTLWKLPMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQGQCMAFVIQKP 168


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  171 bits (433), Expect = 2e-41
 Identities = 76/123 (61%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
 Frame = +1

Query: 7   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG--- 177
           M VW P    KFET SYLPPL+ +QIAKQVD+M+++   PCIEFD +GSV R +F G   
Sbjct: 92  MQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGS 151

Query: 178 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQ 357
           SGYYDGRYW MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV 
Sbjct: 152 SGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVS 211

Query: 358 KPS 366
           +P+
Sbjct: 212 RPN 214


>tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small
           chain OS=Ammopiptanthus mongolicus PE=2 SV=1
          Length = 174

 Score =  171 bits (433), Expect = 2e-41
 Identities = 74/120 (61%), Positives = 93/120 (77%), Gaps = 1/120 (0%)
 Frame = +1

Query: 7   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSG 183
           MLVW P   KKFETLSYLPPLS E + K+V++++RKGW PC+EF+ + G VYRE+    G
Sbjct: 50  MLVWPPLGRKKFETLSYLPPLSIESLTKEVEYLLRKGWVPCLEFELEHGFVYRENNRSPG 109

Query: 184 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQKP 363
           YYDGRYW MWKLPMFGC DA+ V++E+ EC +EYP AF+R++GFD KRQVQ   F+  KP
Sbjct: 110 YYDGRYWTMWKLPMFGCSDASQVMKELEECKKEYPTAFVRIIGFDNKRQVQCISFIAYKP 169


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  171 bits (433), Expect = 2e-41
 Identities = 76/123 (61%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
 Frame = +1

Query: 7   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG--- 177
           M VW P    KFET SYLPPL+ +QIAKQVD+M+++   PCIEFD +GSV R +F G   
Sbjct: 62  MQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGS 121

Query: 178 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQ 357
           SGYYDGRYW MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV 
Sbjct: 122 SGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVS 181

Query: 358 KPS 366
           +P+
Sbjct: 182 RPN 184


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  170 bits (430), Expect = 4e-41
 Identities = 76/123 (61%), Positives = 94/123 (76%), Gaps = 3/123 (2%)
 Frame = +1

Query: 7   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSG- 183
           M VW P    KFET SYLPPLS +QIA+QVD+M+++   PCIEFD +G+V R +F GSG 
Sbjct: 62  MQVWNPIGQPKFETFSYLPPLSDDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFSGSGS 121

Query: 184 --YYDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQ 357
             YYDGRYW MWKLPMFGC D++ VLREI EC   YP  ++RVLGFD+K+QVQ+ GFLV 
Sbjct: 122 SGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTSYPSCWVRVLGFDSKKQVQICGFLVA 181

Query: 358 KPS 366
           +P+
Sbjct: 182 RPN 184


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  169 bits (429), Expect = 6e-41
 Identities = 75/123 (60%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
 Frame = +1

Query: 7   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG--- 177
           M VW P    KFET SYLPPL+ ++IAKQVD+M+++   PCIEFD +GSV R +F G   
Sbjct: 61  MQVWNPIGQPKFETFSYLPPLTDDEIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGS 120

Query: 178 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAEEYPEAFIRVLGFDAKRQVQVSGFLVQ 357
           SGYYDGRYW MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV 
Sbjct: 121 SGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTQFPSCWVRVLGFDSKKQVQICGFLVS 180

Query: 358 KPS 366
           +P+
Sbjct: 181 RPN 183