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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945845
Clone id YMU02A01NGRL0010_K03
Library
Length 308
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_K03. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
TCGCAGATTGGTTGTATGCAATTGCAATGGGTATTGCATGTGGGGTCTTTATTTATGTGG
CAATCAATCATCTATTTGTTAAAGGATATGTTCCTCAATGTAAAGTACGTGTGGACACTC
CATTCTATAAGTTCCTCGCCGTCACTCTCGGTGTCGGTGTCATAGCAGTGGTCATGATAT
GGGATTAGTATATATATACTGAGTGTTACCCACTTCTCAAGAGGCATTGTACATTCTTTA
CTTCTGAGAAATTGATAAATGTAGGCTGTTTATTATCCTAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q94EG9
Definition sp|Q94EG9|ZIP11_ARATH Zinc transporter 11 OS=Arabidopsis thaliana
Align length 61
Score (bit) 92.0
E-value 8.0e-19
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945845|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_K03, 5'
         (266 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q94EG9|ZIP11_ARATH Zinc transporter 11 OS=Arabidopsis thalian...    92   8e-19
sp|Q9LTH9|ZIP2_ARATH Zinc transporter 2 OS=Arabidopsis thaliana ...    89   9e-18
sp|Q21874|YF1M_CAEEL Uncharacterized protein R09E10.5 OS=Caenorh...    31   2.2  
sp|P25502|PUT3_YEAST Proline utilization trans-activator OS=Sacc...    29   6.5  

>sp|Q94EG9|ZIP11_ARATH Zinc transporter 11 OS=Arabidopsis thaliana
           GN=ZIP11 PE=2 SV=1
          Length = 326

 Score = 92.0 bits (227), Expect = 8e-19
 Identities = 40/61 (65%), Positives = 49/61 (80%)
 Frame = +3

Query: 3   ADWLYAIAMGIACGVFIYVAINHLFVKGYVPQCKVRVDTPFYKFLAVTLGVGVIAVVMIW 182
           ADW++A++M +ACGVF+YV++NHL  KGY P  KV VD P YKFLAV  GV VIA+VMIW
Sbjct: 265 ADWIFALSMSLACGVFVYVSVNHLLAKGYRPNKKVHVDEPRYKFLAVLFGVVVIAIVMIW 324

Query: 183 D 185
           D
Sbjct: 325 D 325


>sp|Q9LTH9|ZIP2_ARATH Zinc transporter 2 OS=Arabidopsis thaliana
           GN=ZIP2 PE=2 SV=1
          Length = 353

 Score = 88.6 bits (218), Expect = 9e-18
 Identities = 38/60 (63%), Positives = 48/60 (80%)
 Frame = +3

Query: 6   DWLYAIAMGIACGVFIYVAINHLFVKGYVPQCKVRVDTPFYKFLAVTLGVGVIAVVMIWD 185
           DW YAI+MG+ACGVF+YVA+NHL  KGY P+ +   D P YKF+AV LGV +++VVMIWD
Sbjct: 294 DWTYAISMGLACGVFVYVAVNHLISKGYKPREECYFDKPIYKFIAVFLGVALLSVVMIWD 353


>sp|Q21874|YF1M_CAEEL Uncharacterized protein R09E10.5
            OS=Caenorhabditis elegans GN=R09E10.5 PE=1 SV=1
          Length = 1459

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +3

Query: 81   KGYVPQCKVRVDTPFYKFLAVTLG-VGVIAVVMI 179
            KG  P C+ R+   ++K+LAV  G VG+I V+++
Sbjct: 1331 KGNQPWCRSRIKENYFKWLAVIAGIVGIIIVILL 1364


>sp|P25502|PUT3_YEAST Proline utilization trans-activator
           OS=Saccharomyces cerevisiae GN=PUT3 PE=1 SV=1
          Length = 979

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -1

Query: 161 DTDTESDGEELIEWSVHTYFTLRNISFNK*MIDCHINKDPTC 36
           DTD  S  EE+I++ + +Y      ++ K +IDC IN +  C
Sbjct: 319 DTDGSSGQEEVIQFQLPSY------NYTKLLIDCFINYNDGC 354
tr_hit_id A9PFB8
Definition tr|A9PFB8|A9PFB8_POPTR Putative uncharacterized protein OS=Populus trichocarpa
Align length 60
Score (bit) 102.0
E-value 9.0e-21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945845|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_K03, 5'
         (266 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9PFB8|A9PFB8_POPTR Putative uncharacterized protein OS=Popul...   102   9e-21
tr|A9PF15|A9PF15_POPTR Putative uncharacterized protein OS=Popul...   102   9e-21
tr|A7NYX0|A7NYX0_VITVI Chromosome chr6 scaffold_3, whole genome ...   102   1e-20
tr|A5BC54|A5BC54_VITVI Putative uncharacterized protein OS=Vitis...   102   1e-20
tr|Q2XNU1|Q2XNU1_ASPOF Zinc transporter, putative OS=Asparagus o...   100   6e-20
tr|Q9AWG7|Q9AWG7_MEDTR Zinc transporter (Zinc/iron permease) OS=...    99   8e-20
tr|Q6VM15|Q6VM15_MEDTR Metal transport protein OS=Medicago trunc...    98   2e-19
tr|A7Q964|A7Q964_VITVI Chromosome chr19 scaffold_66, whole genom...    98   2e-19
tr|A1YIQ6|A1YIQ6_SOLLC Putative zinc transporter OS=Solanum lyco...    98   2e-19
tr|A7Q962|A7Q962_VITVI Chromosome chr19 scaffold_66, whole genom...    97   4e-19
tr|A7Q961|A7Q961_VITVI Chromosome chr19 scaffold_66, whole genom...    97   4e-19
tr|A5C9M5|A5C9M5_VITVI Putative uncharacterized protein OS=Vitis...    97   4e-19
tr|A7Q965|A7Q965_VITVI Chromosome chr19 scaffold_66, whole genom...    96   7e-19
tr|A5ATH0|A5ATH0_VITVI Putative uncharacterized protein OS=Vitis...    96   1e-18
tr|Q94DG6|Q94DG6_ORYSJ Zinc transporter (Os01g0972200 protein) O...    89   8e-17
tr|Q6YZC4|Q6YZC4_ORYSJ Putative zinc transporter OS=Oryza sativa...    89   8e-17
tr|A3BV75|A3BV75_ORYSJ Putative uncharacterized protein OS=Oryza...    89   8e-17
tr|A3A1Z8|A3A1Z8_ORYSJ Putative uncharacterized protein OS=Oryza...    89   8e-17
tr|A2WZK9|A2WZK9_ORYSI Putative uncharacterized protein OS=Oryza...    89   8e-17
tr|A2WZK6|A2WZK6_ORYSI Putative uncharacterized protein OS=Oryza...    89   8e-17
tr|Q0WSL6|Q0WSL6_ARATH Putative zinc transporter ZIP2-like OS=Ar...    89   1e-16
tr|B6UH65|B6UH65_MAIZE Zinc transporter 2 OS=Zea mays PE=2 SV=1        87   3e-16
tr|Q2L3T2|Q2L3T2_WHEAT Putative zinc transporter OS=Triticum aes...    87   4e-16
tr|Q852F6|Q852F6_ORYSJ Os03g0411800 protein OS=Oryza sativa subs...    86   1e-15
tr|A3AJ17|A3AJ17_ORYSJ Putative uncharacterized protein OS=Oryza...    86   1e-15
tr|A2XHX3|A2XHX3_ORYSI Putative uncharacterized protein OS=Oryza...    86   1e-15
tr|A9RMR5|A9RMR5_PHYPA Predicted protein OS=Physcomitrella paten...    85   2e-15
tr|A9NIW8|A9NIW8_WHEAT Putative zinc transporter OS=Triticum aes...    85   2e-15
tr|A9TGF4|A9TGF4_PHYPA Predicted protein OS=Physcomitrella paten...    84   3e-15
tr|A9T038|A9T038_PHYPA Predicted protein OS=Physcomitrella paten...    84   3e-15

>tr|A9PFB8|A9PFB8_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 354

 Score =  102 bits (254), Expect = 9e-21
 Identities = 45/60 (75%), Positives = 54/60 (90%)
 Frame = +3

Query: 3   ADWLYAIAMGIACGVFIYVAINHLFVKGYVPQCKVRVDTPFYKFLAVTLGVGVIAVVMIW 182
           ADW++AI+MG+ACGVFIYV+INHL  KGY+PQ  V VDTP YKFLAV+LG+GV+AVVMIW
Sbjct: 289 ADWIFAISMGLACGVFIYVSINHLSTKGYLPQRSVLVDTPLYKFLAVSLGIGVVAVVMIW 348


>tr|A9PF15|A9PF15_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 350

 Score =  102 bits (254), Expect = 9e-21
 Identities = 45/60 (75%), Positives = 54/60 (90%)
 Frame = +3

Query: 3   ADWLYAIAMGIACGVFIYVAINHLFVKGYVPQCKVRVDTPFYKFLAVTLGVGVIAVVMIW 182
           ADW++AI+MG+ACGVFIYV+INHL  KGY+PQ  V VDTP YKFLAV+LG+GV+AVVMIW
Sbjct: 285 ADWIFAISMGLACGVFIYVSINHLSTKGYLPQRSVLVDTPLYKFLAVSLGIGVVAVVMIW 344


>tr|A7NYX0|A7NYX0_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024285001
           PE=4 SV=1
          Length = 327

 Score =  102 bits (253), Expect = 1e-20
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = +3

Query: 3   ADWLYAIAMGIACGVFIYVAINHLFVKGYVPQCKVRVDTPFYKFLAVTLGVGVIAVVMIW 182
           ADW+YAI+MG+ACGVFIYVAINHL  KG+ PQ ++  DTPF+KFLAV  GVGVIAVVMIW
Sbjct: 267 ADWIYAISMGLACGVFIYVAINHLVAKGFKPQTQLYFDTPFFKFLAVLAGVGVIAVVMIW 326

Query: 183 D 185
           D
Sbjct: 327 D 327


>tr|A5BC54|A5BC54_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_022309 PE=4 SV=1
          Length = 1218

 Score =  102 bits (253), Expect = 1e-20
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = +3

Query: 3    ADWLYAIAMGIACGVFIYVAINHLFVKGYVPQCKVRVDTPFYKFLAVTLGVGVIAVVMIW 182
            ADW+YAI+MG+ACGVFIYVAINHL  KG+ PQ ++  DTPF+KFLAV  GVGVIAVVMIW
Sbjct: 1158 ADWIYAISMGLACGVFIYVAINHLVAKGFKPQTQLYFDTPFFKFLAVLAGVGVIAVVMIW 1217

Query: 183  D 185
            D
Sbjct: 1218 D 1218


>tr|Q2XNU1|Q2XNU1_ASPOF Zinc transporter, putative OS=Asparagus
           officinalis GN=12.t00049 PE=4 SV=1
          Length = 662

 Score = 99.8 bits (247), Expect = 6e-20
 Identities = 44/61 (72%), Positives = 53/61 (86%)
 Frame = +3

Query: 3   ADWLYAIAMGIACGVFIYVAINHLFVKGYVPQCKVRVDTPFYKFLAVTLGVGVIAVVMIW 182
           ADW++AI+MGIACG+FIYVAINHL  KGY PQ  V V+TP Y++LA+ LG+GVIAVVMIW
Sbjct: 601 ADWIFAISMGIACGIFIYVAINHLLAKGYQPQQPVAVNTPMYRWLALVLGIGVIAVVMIW 660

Query: 183 D 185
           D
Sbjct: 661 D 661


>tr|Q9AWG7|Q9AWG7_MEDTR Zinc transporter (Zinc/iron permease)
           OS=Medicago truncatula GN=ZIP PE=2 SV=1
          Length = 336

 Score = 99.4 bits (246), Expect = 8e-20
 Identities = 45/61 (73%), Positives = 52/61 (85%)
 Frame = +3

Query: 3   ADWLYAIAMGIACGVFIYVAINHLFVKGYVPQCKVRVDTPFYKFLAVTLGVGVIAVVMIW 182
           ADW+YAI+MGIACGVF+YVAINHL  KG+ PQ K R DTP+++FLAV  GV VIAVVMIW
Sbjct: 276 ADWMYAISMGIACGVFVYVAINHLISKGFKPQRKSRFDTPWFRFLAVLFGVAVIAVVMIW 335

Query: 183 D 185
           D
Sbjct: 336 D 336


>tr|Q6VM15|Q6VM15_MEDTR Metal transport protein OS=Medicago
           truncatula GN=ZIP7 PE=2 SV=1
          Length = 350

 Score = 98.2 bits (243), Expect = 2e-19
 Identities = 43/61 (70%), Positives = 53/61 (86%)
 Frame = +3

Query: 3   ADWLYAIAMGIACGVFIYVAINHLFVKGYVPQCKVRVDTPFYKFLAVTLGVGVIAVVMIW 182
           ADW++AI+MG+ACGVFIYV+INHLF KGYVP    + D+ + KFLAV+LG+GVIAVVMIW
Sbjct: 289 ADWIFAISMGLACGVFIYVSINHLFAKGYVPHKHSKADSAYMKFLAVSLGIGVIAVVMIW 348

Query: 183 D 185
           D
Sbjct: 349 D 349


>tr|A7Q964|A7Q964_VITVI Chromosome chr19 scaffold_66, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00033352001
           PE=4 SV=1
          Length = 362

 Score = 98.2 bits (243), Expect = 2e-19
 Identities = 46/61 (75%), Positives = 51/61 (83%)
 Frame = +3

Query: 3   ADWLYAIAMGIACGVFIYVAINHLFVKGYVPQCKVRVDTPFYKFLAVTLGVGVIAVVMIW 182
           ADW+YAI+MG+ACG+FIYV+INHL  KGY  Q  V  DTP YKFLAV LGVGVIAVVMIW
Sbjct: 301 ADWIYAISMGLACGIFIYVSINHLLSKGYTCQRTVPFDTPNYKFLAVLLGVGVIAVVMIW 360

Query: 183 D 185
           D
Sbjct: 361 D 361


>tr|A1YIQ6|A1YIQ6_SOLLC Putative zinc transporter OS=Solanum
           lycopersicum PE=2 SV=1
          Length = 350

 Score = 98.2 bits (243), Expect = 2e-19
 Identities = 43/61 (70%), Positives = 53/61 (86%)
 Frame = +3

Query: 3   ADWLYAIAMGIACGVFIYVAINHLFVKGYVPQCKVRVDTPFYKFLAVTLGVGVIAVVMIW 182
           ADW++AI+MG+ACGVFI+V+INHL  KGY PQ  V++D P +KFLAV LGVG+IAVVMIW
Sbjct: 289 ADWIFAISMGLACGVFIFVSINHLLSKGYKPQKMVKIDKPHFKFLAVLLGVGIIAVVMIW 348

Query: 183 D 185
           D
Sbjct: 349 D 349


>tr|A7Q962|A7Q962_VITVI Chromosome chr19 scaffold_66, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00033350001
           PE=4 SV=1
          Length = 345

 Score = 97.1 bits (240), Expect = 4e-19
 Identities = 46/61 (75%), Positives = 51/61 (83%)
 Frame = +3

Query: 3   ADWLYAIAMGIACGVFIYVAINHLFVKGYVPQCKVRVDTPFYKFLAVTLGVGVIAVVMIW 182
           ADW+YAI+MG+ACG+FIYV+INHL  KGY  Q  V  DTP YKFLAV LGVGVIAVVMIW
Sbjct: 284 ADWIYAISMGLACGIFIYVSINHLLSKGYNCQRTVPFDTPNYKFLAVLLGVGVIAVVMIW 343

Query: 183 D 185
           D
Sbjct: 344 D 344