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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945864
Clone id YMU02A01NGRL0010_L04
Library
Length 614
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_L04. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AACGACACCTACCTGCACTTTCAGTTCACCATGGCGAGCGTAGCCGTGGCCACTATACCT
CCCTCGTGTTCGGCTCATCGCTCCCCGTCCGTATCGCCCAGCCCTTCGTCTGTCCTGCGC
CAAGCTTCGCTGCAACCCTTATGCTCAAAGGCTAAGATGGACGCTTTGAGGGAAGCTACT
ATGCCTTCATGCTTGTCATCTGGACTTGTAGCTGTGCTGTCACGAAAGGAGTGCAACTTG
ATCGTTACCCATGCGGTTGCAGAAGCATTGAGGGAAGAATCTTCTGGAAAAGCAGAAGAG
GGTGCTCCTGTGTATGAGTTGTCCAAGTTACAGCTTGAGTCTGACCTTTTGAAAAAGAAG
GCAAAACGTGCAGAGTTGCGAAGAAAGAGGCTTGTAAGGAAACGTCACTTACGGAAGAAG
GGTAGGTGGCCTCCTTCAAAGATGGCAAAGCTAAAGAATGTTTGACTATTCATCTGGCTG
CTCAATGGACTGTAACATCATTACACTTAAAAACAAAGTGAGATACTCACTGTTGTATGC
AGGTCTTCAGCCTGTTTCATAAATGAGCAGTGTTGTAGGAGCTTCTCCAGCTTACCACTT
GAGCTGGGGGAGCC
■■Homology search results ■■ -
sp_hit_id Q86V24
Definition sp|Q86V24|ADR2_HUMAN Adiponectin receptor protein 2 OS=Homo sapiens
Align length 71
Score (bit) 32.3
E-value 2.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945864|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_L04, 5'
         (614 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q86V24|ADR2_HUMAN Adiponectin receptor protein 2 OS=Homo sapi...    32   2.0  
sp|Q5GWE6|RRMT_XANOR Putative RNA 2'-O-ribose methyltransferase ...    32   2.6  
sp|Q2NZK8|RRMT_XANOM Putative RNA 2'-O-ribose methyltransferase ...    32   2.6  
sp|Q8PCB8|RRMT_XANCP Putative RNA 2'-O-ribose methyltransferase ...    32   2.6  
sp|Q4UR65|RRMT_XANC8 Putative RNA 2'-O-ribose methyltransferase ...    32   2.6  
sp|Q3BX58|RRMT_XANC5 Putative RNA 2'-O-ribose methyltransferase ...    32   2.6  
sp|Q8PNZ9|RRMT_XANAC Putative RNA 2'-O-ribose methyltransferase ...    32   2.6  
sp|Q813A5|Y3499_BACCR UPF0061 protein BC_3499 OS=Bacillus cereus...    30   7.5  
sp|O84418|PMPB_CHLTR Probable outer membrane protein pmpB OS=Chl...    30   7.5  
sp|Q9L6N1|METE_SALTY 5-methyltetrahydropteroyltriglutamate--homo...    30   9.8  
sp|Q8Z3B6|METE_SALTI 5-methyltetrahydropteroyltriglutamate--homo...    30   9.8  
sp|A9MY90|METE_SALPB 5-methyltetrahydropteroyltriglutamate--homo...    30   9.8  
sp|Q5PKP9|METE_SALPA 5-methyltetrahydropteroyltriglutamate--homo...    30   9.8  
sp|Q57HP2|METE_SALCH 5-methyltetrahydropteroyltriglutamate--homo...    30   9.8  
sp|P70211|DCC_MOUSE Netrin receptor DCC OS=Mus musculus GN=Dcc P...    30   9.8  

>sp|Q86V24|ADR2_HUMAN Adiponectin receptor protein 2 OS=Homo sapiens
           GN=ADIPOR2 PE=1 SV=1
          Length = 386

 Score = 32.3 bits (72), Expect = 2.0
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
 Frame = -1

Query: 287 PEDSSLNASATAWVTIKLHSFR--DSTATSPDDKHEG-IVASLKASILAFEHKGCSEAWR 117
           P ++ L  S T    I+L      D T    +D H+G +   L+AS+L+  HK  SE   
Sbjct: 4   PTENRLGCSRTPEPDIRLRKGHQLDGTRRGDNDSHQGDLEPILEASVLSSHHKKSSEEHE 63

Query: 116 RTDEGLGDTDG 84
            +DE   + +G
Sbjct: 64  YSDEAPQEDEG 74


>sp|Q5GWE6|RRMT_XANOR Putative RNA 2'-O-ribose methyltransferase
           XOO3721 OS=Xanthomonas oryzae pv. oryzae GN=XOO3721 PE=3
           SV=2
          Length = 347

 Score = 32.0 bits (71), Expect = 2.6
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +2

Query: 44  PWPLYLPRVRLIAPRPYRPALRLSCAKL 127
           PWPL +PR++L+   P R AL+L  A L
Sbjct: 166 PWPLGIPRLKLLPEAPSRSALKLDEALL 193


>sp|Q2NZK8|RRMT_XANOM Putative RNA 2'-O-ribose methyltransferase
           XOO3514 OS=Xanthomonas oryzae pv. oryzae (strain MAFF
           311018) GN=XOO3514 PE=3 SV=1
          Length = 347

 Score = 32.0 bits (71), Expect = 2.6
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +2

Query: 44  PWPLYLPRVRLIAPRPYRPALRLSCAKL 127
           PWPL +PR++L+   P R AL+L  A L
Sbjct: 166 PWPLGIPRLKLLPEAPSRSALKLDEALL 193


>sp|Q8PCB8|RRMT_XANCP Putative RNA 2'-O-ribose methyltransferase
           XCC0816 OS=Xanthomonas campestris pv. campestris
           GN=XCC0816 PE=3 SV=1
          Length = 347

 Score = 32.0 bits (71), Expect = 2.6
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +2

Query: 44  PWPLYLPRVRLIAPRPYRPALRLSCAKL 127
           PWPL +PR++L+   P R AL+L  A L
Sbjct: 166 PWPLGIPRLKLLPEAPSRSALKLDEALL 193


>sp|Q4UR65|RRMT_XANC8 Putative RNA 2'-O-ribose methyltransferase
           XC_3414 OS=Xanthomonas campestris pv. campestris (strain
           8004) GN=XC_3414 PE=3 SV=1
          Length = 347

 Score = 32.0 bits (71), Expect = 2.6
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +2

Query: 44  PWPLYLPRVRLIAPRPYRPALRLSCAKL 127
           PWPL +PR++L+   P R AL+L  A L
Sbjct: 166 PWPLGIPRLKLLPEAPSRSALKLDEALL 193


>sp|Q3BX58|RRMT_XANC5 Putative RNA 2'-O-ribose methyltransferase
           XCV0924 OS=Xanthomonas campestris pv. vesicatoria
           (strain 85-10) GN=XCV0924 PE=3 SV=1
          Length = 347

 Score = 32.0 bits (71), Expect = 2.6
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +2

Query: 44  PWPLYLPRVRLIAPRPYRPALRLSCAKL 127
           PWPL +PR++L+   P R AL+L  A L
Sbjct: 166 PWPLGIPRLKLLPEAPSRSALKLDEALL 193


>sp|Q8PNZ9|RRMT_XANAC Putative RNA 2'-O-ribose methyltransferase
           XAC0889 OS=Xanthomonas axonopodis pv. citri GN=XAC0889
           PE=3 SV=1
          Length = 347

 Score = 32.0 bits (71), Expect = 2.6
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +2

Query: 44  PWPLYLPRVRLIAPRPYRPALRLSCAKL 127
           PWPL +PR++L+   P R AL+L  A L
Sbjct: 166 PWPLGIPRLKLLPEAPSRSALKLDEALL 193


>sp|Q813A5|Y3499_BACCR UPF0061 protein BC_3499 OS=Bacillus cereus
           (strain ATCC 14579 / DSM 31) GN=BC_3499 PE=3 SV=1
          Length = 488

 Score = 30.4 bits (67), Expect = 7.5
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = -1

Query: 350 KRSDSSCNLDNSYTGAPSSAFPEDSSLNASATAWVTIKLHSFRDSTATSPDD-KHEGIVA 174
           K +++  NLDNSYT  P S + E      S+   V +  HS   S   +P++ K E  +A
Sbjct: 3   KNNETGWNLDNSYTTLPQSFYTEIPPTPVSSPELVKLN-HSLAISLGLTPEELKKEAEIA 61


>sp|O84418|PMPB_CHLTR Probable outer membrane protein pmpB
           OS=Chlamydia trachomatis GN=pmpB PE=2 SV=2
          Length = 1754

 Score = 30.4 bits (67), Expect = 7.5
 Identities = 16/63 (25%), Positives = 32/63 (50%)
 Frame = -1

Query: 314 YTGAPSSAFPEDSSLNASATAWVTIKLHSFRDSTATSPDDKHEGIVASLKASILAFEHKG 135
           +T  P++     ++ N+S++   T  +    DST T+PD K  G   +  + +L+F  + 
Sbjct: 66  FTNIPTTDTTTPTNSNSSSSNGETASVSEDSDSTTTTPDPKGGGAFYNAHSGVLSFMTRS 125

Query: 134 CSE 126
            +E
Sbjct: 126 GTE 128


>sp|Q9L6N1|METE_SALTY
           5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase OS=Salmonella typhimurium GN=metE PE=3
           SV=3
          Length = 754

 Score = 30.0 bits (66), Expect = 9.8
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -2

Query: 370 HVLPSFSKGQTQAVTWTTHTQE--HPLLLFQKILPSML 263
           +++P FSKGQ   +TWT   +E    L L  KI P +L
Sbjct: 125 YIVPEFSKGQQFRLTWTQLLEEVDEALALGHKIKPVLL 162
tr_hit_id B0DQH2
Definition tr|B0DQH2|B0DQH2_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82)
Align length 76
Score (bit) 33.9
E-value 7.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945864|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_L04, 5'
         (614 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0DQH2|B0DQH2_LACBS Predicted protein OS=Laccaria bicolor (st...    34   7.7  
tr|A8NGA9|A8NGA9_COPC7 Predicted protein OS=Coprinopsis cinerea ...    34   7.7  

>tr|B0DQH2|B0DQH2_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_295321 PE=4 SV=1
          Length = 512

 Score = 33.9 bits (76), Expect = 7.7
 Identities = 26/76 (34%), Positives = 36/76 (47%)
 Frame = -1

Query: 428 HLPFFRK*RFLTSLFLRNSARFAFFFKRSDSSCNLDNSYTGAPSSAFPEDSSLNASATAW 249
           HLP     R + SL + +  R+   F R+DSS    NS+    SS+    S+  AS TA 
Sbjct: 34  HLP-----RQVVSLNITSGTRYTTNFYRADSSSAPSNSFLELSSSSLTPSSTSEASNTAS 88

Query: 248 VTIKLHSFRDSTATSP 201
            T +L +   ST   P
Sbjct: 89  STFQLLTDTVSTTQIP 104


>tr|A8NGA9|A8NGA9_COPC7 Predicted protein OS=Coprinopsis cinerea
           (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_05092 PE=4
           SV=1
          Length = 333

 Score = 33.9 bits (76), Expect = 7.7
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -1

Query: 320 NSYTGAPSSAFPEDSSLNASATAWVTIKLHSFRDSTATSPDDKHEGIVASLKA 162
           + +TG+ S       S   SAT  V I L  +RD T T P D ++G+   +++
Sbjct: 248 SQFTGSASQHSYIPGSGTRSATGGVNIALRKYRDPTYTGPSDVYDGVKVQVRS 300