DK945870 |
Clone id |
YMU02A01NGRL0010_L12 |
Library |
YMU02 |
Length |
534 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_L12. 5' end sequence. |
Accession |
DK945870 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL30Contig1 |
Sequence |
GAACGCTTCTGGAAACAAGCCTGACTTGATCCTCTTCGGAACAGGATCTGAACTAGAGAT TGCCTACAAAGCAGCCGAAGTCATCAGGAAGGAGGGCAAAACTGTGAGAGTTGTCTCAAT GGTATCATGGGAGTTGTTTGAAGAACAAAGTGCTGAATACAAAGAGAGTGTTATCCCTGC AGCCGTGACTTCCAGAGTGAGTGTCGAAGCTGGTTCTACATTCGGTTGGGAGAAGTATGT AGGCTCCAAAGGCAAAGCAATAGGCATTGACCACTTTGGTGCCAGTGCACCTGCTGGTAC CATCTACAAAAAGTTTGGTTTGACTGTGGACAATGTGGTTGCCAATGCCAAGGAGGTGAT GTAAATATACTTTTGTATTTACTCTGCAGTTTTGTAGTAATAACCTAATTGATTTGAGAT GTTCTGATTGGGATGGATTTTAGTCCAATGGATGGTTGCCCATATGCTGGATTGTGGCAC ANATGGCCGCAAGTTTTTGTATTTTTTCTGCTGGGCTTGGAGGTGTAACAAAGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7SIC9 |
Definition |
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays |
Align length |
117 |
Score (bit) |
189.0 |
E-value |
9.0e-48 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945870|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0010_L12, 5' (534 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 189 9e-48 sp|Q42676|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=... 188 2e-47 sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 186 8e-47 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 179 6e-45 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 167 3e-41 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 166 7e-41 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 148 2e-35 sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN... 132 1e-30 sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=t... 131 2e-30 sp|Q7MDD4|TKT2_VIBVY Transketolase 2 OS=Vibrio vulnificus (strai... 129 9e-30 sp|Q87GY4|TKT2_VIBPA Transketolase 2 OS=Vibrio parahaemolyticus ... 128 2e-29 sp|Q7MHK7|TKT1_VIBVY Transketolase 1 OS=Vibrio vulnificus (strai... 127 3e-29 sp|Q87LK8|TKT1_VIBPA Transketolase 1 OS=Vibrio parahaemolyticus ... 127 3e-29 sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN... 127 3e-29 sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (stra... 126 6e-29 sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (stra... 126 6e-29 sp|Q6GH64|TKT_STAAR Transketolase OS=Staphylococcus aureus (stra... 126 6e-29 sp|P99161|TKT_STAAN Transketolase OS=Staphylococcus aureus (stra... 126 6e-29 sp|P66962|TKT_STAAM Transketolase OS=Staphylococcus aureus (stra... 126 6e-29 sp|Q5HG77|TKT_STAAC Transketolase OS=Staphylococcus aureus (stra... 126 6e-29 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 126 7e-29 sp|Q8D6H8|TKT2_VIBVU Transketolase 2 OS=Vibrio vulnificus GN=tkt... 126 7e-29 sp|Q9KLW7|TKT2_VIBCH Transketolase 2 OS=Vibrio cholerae GN=tkt2 ... 126 7e-29 sp|Q8DCA2|TKT1_VIBVU Transketolase 1 OS=Vibrio vulnificus GN=tkt... 126 7e-29 sp|Q9KUP2|TKT1_VIBCH Transketolase 1 OS=Vibrio cholerae GN=tkt1 ... 126 7e-29 sp|P33570|TKT2_ECOLI Transketolase 2 OS=Escherichia coli (strain... 123 6e-28 sp|Q5DZP0|TKT2_VIBF1 Transketolase 2 OS=Vibrio fischeri (strain ... 122 1e-27 sp|Q5E7R1|TKT1_VIBF1 Transketolase 1 OS=Vibrio fischeri (strain ... 120 3e-27 sp|P27302|TKT1_ECOLI Transketolase 1 OS=Escherichia coli (strain... 120 3e-27 sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes sero... 120 5e-27
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 189 bits (479), Expect = 9e-48 Identities = 89/117 (76%), Positives = 109/117 (93%) Frame = +2
Query: 2 NASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEEQSAEYKESVIPA 181 N++GNKPDLI+ GTGSELEIA KAA+ +RKEGKTVRVVS VSWELF+EQS EYKESV+PA Sbjct: 557 NSTGNKPDLIVMGTGSELEIAAKAADELRKEGKTVRVVSFVSWELFDEQSDEYKESVLPA 616
Query: 182 AVTSRVSVEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVANAK 352 AVT+R+S+EAGST GW+KYVG++GKAIGID FGASAPAGTIYK++G+TV++++A AK Sbjct: 617 AVTARISIEAGSTLGWQKYVGAQGKAIGIDKFGASAPAGTIYKEYGITVESIIAAAK 673
>sp|Q42676|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=Craterostigma plantagineum GN=TKT3 PE=1 SV=1 Length = 519
Score = 188 bits (477), Expect = 2e-47 Identities = 93/120 (77%), Positives = 108/120 (90%) Frame = +2
Query: 2 NASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEEQSAEYKESVIPA 181 N+SGNKPD+IL GTGSELEIA KA EV+RKEGK VRVVS VSWELF+EQS EYKESV+P+ Sbjct: 400 NSSGNKPDVILIGTGSELEIAAKAGEVLRKEGKGVRVVSFVSWELFDEQSKEYKESVLPS 459
Query: 182 AVTSRVSVEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVANAKEVM 361 +VT+RVS+EAGSTFGW K VGSKGKAIGID FGASAPAG IY++FG+TV+ VVA AKE++ Sbjct: 460 SVTARVSIEAGSTFGWGKIVGSKGKAIGIDRFGASAPAGKIYEEFGITVEAVVAAAKELI 519
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 186 bits (471), Expect = 8e-47 Identities = 90/119 (75%), Positives = 107/119 (89%) Frame = +2
Query: 2 NASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEEQSAEYKESVIPA 181 N+SGNKPD+IL GTGSELEIA KAAE ++KEGKTVRVVS V WEL++EQSAEYKESV+P+ Sbjct: 622 NSSGNKPDVILIGTGSELEIAVKAAEELKKEGKTVRVVSFVCWELYDEQSAEYKESVLPS 681
Query: 182 AVTSRVSVEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVANAKEV 358 +VT+RVS+EAGSTFGW+K+VG KGKAIGID FGASAPA IYK+FG+T + VVA AK+V Sbjct: 682 SVTARVSIEAGSTFGWQKFVGDKGKAIGIDGFGASAPADKIYKEFGITAEAVVAAAKQV 740
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 179 bits (455), Expect = 6e-45 Identities = 89/119 (74%), Positives = 103/119 (86%) Frame = +2
Query: 2 NASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEEQSAEYKESVIPA 181 N+SGNKPD+IL GTGSELEIA KA + +RKEGK VRVVS VSWELFE+QS EYKESV+P+ Sbjct: 622 NSSGNKPDVILIGTGSELEIAAKAGDELRKEGKAVRVVSFVSWELFEKQSDEYKESVLPS 681
Query: 182 AVTSRVSVEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVANAKEV 358 VT+RVS+EAGSTFGW K VGSKGKAIGID FGASAPAG IY+++G+TV+ VV AK V Sbjct: 682 DVTARVSIEAGSTFGWHKIVGSKGKAIGIDKFGASAPAGKIYQEYGITVEAVVEAAKSV 740
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 167 bits (423), Expect = 3e-41 Identities = 82/116 (70%), Positives = 99/116 (85%) Frame = +2
Query: 11 GNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVT 190 G KP++IL GTGSELEIA +A E +RKEGK VRVVS+VSWELF EQS EYKE V+P+ VT Sbjct: 563 GEKPEVILMGTGSELEIAARAGEELRKEGKKVRVVSLVSWELFGEQSKEYKEMVLPSEVT 622
Query: 191 SRVSVEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVANAKEV 358 +RVSVEAGSTFGWE++VG KG+A+GID FGASA A +YK+FG+TV+ VVA AKE+ Sbjct: 623 ARVSVEAGSTFGWERFVGLKGRAVGIDRFGASASAERLYKEFGITVEAVVAAAKEL 678
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 166 bits (420), Expect = 7e-41 Identities = 78/115 (67%), Positives = 100/115 (86%) Frame = +2
Query: 14 NKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTS 193 +KPD+IL GTGSELEIA +A + +RKEGK VRVVS+V WELF EQS +Y+E+V+P+ VT+ Sbjct: 561 SKPDVILIGTGSELEIAARAGDELRKEGKKVRVVSLVCWELFAEQSEKYRETVLPSGVTA 620
Query: 194 RVSVEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVANAKEV 358 RVSVEAGSTFGWE+++G KGKA+GID FGASAPA ++K+FG+TV+ VVA AKE+ Sbjct: 621 RVSVEAGSTFGWERFIGPKGKAVGIDRFGASAPAERLFKEFGITVEAVVAAAKEI 675
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 148 bits (373), Expect = 2e-35 Identities = 69/114 (60%), Positives = 89/114 (78%) Frame = +2
Query: 20 PDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRV 199 PDLIL GTGSEL + AAE ++ EGK VRVVS+ +W+LF+ Q A YKESV+P AVT R+ Sbjct: 556 PDLILIGTGSELSLCVTAAEKLKAEGKKVRVVSLAAWDLFDAQDAAYKESVLPKAVTKRL 615
Query: 200 SVEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVANAKEVM 361 +VEA S+FGW KY+GS+G A+ ID FGASAP G +KFG +VDNV+A AK+++ Sbjct: 616 AVEAASSFGWHKYIGSEGDAVTIDRFGASAPGGVCLEKFGFSVDNVLAKAKQLL 669
>sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN=tktB PE=3 SV=1 Length = 668
Score = 132 bits (331), Expect = 1e-30 Identities = 64/116 (55%), Positives = 87/116 (75%) Frame = +2
Query: 14 NKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTS 193 N PDLIL TGSE+E+A KAA+V+ EG VRVVSM S +F++Q A Y+ESV+P+ +T Sbjct: 553 NCPDLILIATGSEVELAMKAADVLDAEGVKVRVVSMPSTNVFDKQDAAYRESVLPSHITK 612
Query: 194 RVSVEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVANAKEVM 361 RV++EAG W KYVG +G+ +G++ FG SAPA ++K FG TV+NVVA AKE++ Sbjct: 613 RVAIEAGIADFWYKYVGFEGRVVGMNSFGESAPADQLFKLFGFTVENVVAKAKEIL 668
>sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=tktA PE=3 SV=1 Length = 665
Score = 131 bits (330), Expect = 2e-30 Identities = 65/114 (57%), Positives = 84/114 (73%) Frame = +2
Query: 20 PDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRV 199 P+LI TGSE+E+A +AAE + EGK VRVVSM S F++Q A Y+ESV+PAAVT RV Sbjct: 552 PELIFIATGSEVELAVQAAEALSAEGKKVRVVSMPSTNRFDKQDAAYRESVLPAAVTKRV 611
Query: 200 SVEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVANAKEVM 361 ++EAG W KYVG G+ IG++ FG SAPA ++K FG TV+NVVA AKE++ Sbjct: 612 AIEAGIADFWYKYVGFNGRVIGMNSFGESAPADQLFKLFGFTVENVVAKAKEIL 665
>sp|Q7MDD4|TKT2_VIBVY Transketolase 2 OS=Vibrio vulnificus (strain YJ016) GN=tkt2 PE=3 SV=1 Length = 663
Score = 129 bits (324), Expect = 9e-30 Identities = 64/118 (54%), Positives = 87/118 (73%) Frame = +2
Query: 8 SGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAV 187 S KP+LIL TGSE+E+A KAAE + EGK VRVVSM + + F++Q A Y+ESV+P+ V Sbjct: 545 SDGKPELILIATGSEVELAVKAAEQLTAEGKKVRVVSMPATDAFDKQDAAYRESVLPSDV 604
Query: 188 TSRVSVEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVANAKEVM 361 T+R+++EAG T W KYVG G+ IG+ FG SAPA +++ FG TV+NVV AKE++ Sbjct: 605 TARIAIEAGITDFWYKYVGFDGRIIGMTTFGESAPADQLFEMFGFTVENVVNTAKELL 662
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
O78327 |
Definition |
tr|O78327|O78327_CAPAN Transketolase 1 OS=Capsicum annuum |
Align length |
119 |
Score (bit) |
191.0 |
E-value |
2.0e-47 |
Report |
|