DK945893 |
Clone id |
YMU02A01NGRL0010_M18 |
Library |
YMU02 |
Length |
439 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_M18. 5' end sequence. |
Accession |
DK945893 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL28Contig1 |
Sequence |
CTTTCTCTGGCGCGTGAGATGCATGAAGGCAGAGGCCCCTTCTGTGTTCTTCTATTTCGC GCGTGTCCGCGTCCCGATTCAAGGGGCTGTGGACCTGGTCTTCTGCCGTCTCTCGCTCGT GGAGGCTCCTTGCTGGCGGTGGTGCAGGGAATGAAGTCGACGCTGATTGCGATGGAAGGT TCGGTCTCTACAGCCTGTGTGACGACGCCATGCTGTGCCAATTCTCCCCAGATTGCTTCG GTGGAGTTGGCTCATCATTGCGTGATGCAGTTGCATGTGATTCCCAAATCTGGCTATGGA CTGCAAGGGCTTTAAATTCACCATTTCTAAGGTTGTAATTGTCGACTGTTTTCGAGGCCT GCGTGTAAGGTGTTGCTCTCTTTCTTGAGCATGTCTTCTGTTGTGTTCCAAAAAAAAAAA AAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54XG7 |
Definition |
sp|Q54XG7|DIMA_DICDI Basic-leucine zipper transcription factor A OS=Dictyostelium discoideum |
Align length |
67 |
Score (bit) |
32.3 |
E-value |
0.76 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4J7L9 |
Definition |
tr|B4J7L9|B4J7L9_DROGR GH21844 OS=Drosophila grimshawi |
Align length |
112 |
Score (bit) |
35.4 |
E-value |
1.4 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945893|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0010_M18, 5' (388 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4J7L9|B4J7L9_DROGR GH21844 OS=Drosophila grimshawi GN=GH2184... 35 1.4 tr|A9GJ56|A9GJ56_SORC5 Putative uncharacterized protein OS=Soran... 35 1.4 tr|Q08VD8|Q08VD8_STIAU Putative uncharacterized protein (Fragmen... 34 3.2 tr|A8N3M3|A8N3M3_COPC7 Putative uncharacterized protein OS=Copri... 34 3.2 tr|Q4CVE1|Q4CVE1_TRYCR Putative uncharacterized protein OS=Trypa... 33 5.5 tr|B4KVA7|B4KVA7_DROMO GI12133 OS=Drosophila mojavensis GN=GI121... 33 5.5 tr|Q29CZ5|Q29CZ5_DROPS GA19866 OS=Drosophila pseudoobscura pseud... 33 7.1 tr|B5E139|B5E139_DROPS GA24574 OS=Drosophila pseudoobscura pseud... 33 7.1 tr|B4JPU5|B4JPU5_DROGR GH13335 OS=Drosophila grimshawi GN=GH1333... 33 7.1 tr|B4HH60|B4HH60_DROSE GM26621 OS=Drosophila sechellia GN=GM2662... 33 9.3 tr|A8XW25|A8XW25_CAEBR Putative uncharacterized protein OS=Caeno... 33 9.3 tr|Q5ART7|Q5ART7_EMENI Putative uncharacterized protein OS=Emeri... 33 9.3 tr|A2R7A5|A2R7A5_ASPNC Contig An16c0100, complete genome. OS=Asp... 33 9.3
>tr|B4J7L9|B4J7L9_DROGR GH21844 OS=Drosophila grimshawi GN=GH21844 PE=4 SV=1 Length = 857
Score = 35.4 bits (80), Expect = 1.4 Identities = 27/112 (24%), Positives = 42/112 (37%), Gaps = 9/112 (8%) Frame = -2
Query: 372 HAQEREQHLTRRPRKQSTITTLEMVNLKPLQSIARFGNHMQLHHAMMSQLHRSNLGRIGT 193 H Q QH+ ++ ++Q + T+ N A G H +M R G G Sbjct: 685 HGQHHLQHIQQQQQQQQHVVTVSPANKPKSHFCASCGKGFAAKHGLMQHNRRHPNG--GC 742
Query: 192 AWRRHT-GCRDRTFHRNQRRLHSLHH--------RQQGASTSERRQKTRSTA 64 R H C F +N LH H +QQ A +++Q+ + A Sbjct: 743 TVRTHVCECGKAFFQKNHLMLHQRQHLETKPAISQQQEADVQQQQQQQQQAA 794
>tr|A9GJ56|A9GJ56_SORC5 Putative uncharacterized protein OS=Sorangium cellulosum (strain So ce56) GN=sce3199 PE=4 SV=1 Length = 922
Score = 35.4 bits (80), Expect = 1.4 Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 14/107 (13%) Frame = +3
Query: 15 PLLCSSISRVSASRFKGLWTWSSAVSRSWR-----LLAGGGAGNEVDADCDGRFG--LYS 173 P L + +R S + +GLW WS A+ S R LA G E +A G L Sbjct: 616 PRLSEAAARWSPAAVRGLWAWSEALPPSERHMVLARLASGLPAEEREAGASEALGLALSL 675
Query: 174 LCDDAM-------LCQFSPDCFGGVGSSLRDAVACDSQIWLWTARAL 293 L DA+ +C +P G S+L A A + + L +A+ Sbjct: 676 LAGDALPPDACWSICALAPHAPAGAASALVQACAAAAGLHLPVVKAV 722
>tr|Q08VD8|Q08VD8_STIAU Putative uncharacterized protein (Fragment) OS=Stigmatella aurantiaca DW4/3-1 GN=STIAU_4494 PE=4 SV=1 Length = 173
Score = 34.3 bits (77), Expect = 3.2 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Frame = -2
Query: 258 HMQLHHAMMSQLHRSNLGRIGTAWRRH----TGCRDRTFHRNQRRLHSLHH 118 H Q H QLH + G GTA +H G RD R Q+RLH L H Sbjct: 84 HHQRHAEQQRQLHVGDRGADGTAAIQHHLDVDGRRDGVRQRRQQRLHPLDH 134
>tr|A8N3M3|A8N3M3_COPC7 Putative uncharacterized protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_00668 PE=4 SV=1 Length = 837
Score = 34.3 bits (77), Expect = 3.2 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = +3
Query: 48 ASRFKGLWTWSSAVSRSWRLLAGGGAGNEVDAD 146 A F+GL W A + W +LAGGG G VDA+ Sbjct: 630 AEAFEGLEKWKDA-RKDWEILAGGGGGGWVDAN 661
>tr|Q4CVE1|Q4CVE1_TRYCR Putative uncharacterized protein OS=Trypanosoma cruzi GN=Tc00.1047053507933.10 PE=4 SV=1 Length = 2323
Score = 33.5 bits (75), Expect = 5.5 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 1/93 (1%) Frame = -2
Query: 387 EHNRRHAQEREQHLTRRPRKQSTITTLEMVNLKPLQSIARFGN-HMQLHHAMMSQLHRSN 211 E R + +L R + QS + N L+ +AR ++ A ++LHRSN Sbjct: 1867 EELERQNTQSTAYLKEREQLQSALRE----NTSQLERVARKATADLETALAKTNELHRSN 1922
Query: 210 LGRIGTAWRRHTGCRDRTFHRNQRRLHSLHHRQ 112 + ++ TA RR R L SL RQ Sbjct: 1923 IEKLETALRREQQAAQEVRTARDRALESLEERQ 1955
>tr|B4KVA7|B4KVA7_DROMO GI12133 OS=Drosophila mojavensis GN=GI12133 PE=4 SV=1 Length = 1847
Score = 33.5 bits (75), Expect = 5.5 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 9/116 (7%) Frame = -2
Query: 381 NRRHAQEREQHL-TRRPRKQSTITTLEMVNLKPLQSIARFGN--------HMQLHHAMMS 229 N++ E+ L T P ++ST LE + LK L S+ + H ++H + + Sbjct: 573 NKKQPAEKTAELKTEVPAERSTTPPLEDLQLKTLSSLEPLKSTPPQQLKIHNEIHIRIGA 632
Query: 228 QLHRSNLGRIGTAWRRHTGCRDRTFHRNQRRLHSLHHRQQGASTSERRQKTRSTAP 61 L ++L R R T HRN++ H +Q E ++R T P Sbjct: 633 LLEDTDLHYEALLATREQLLRKSTEHRNKKETSKEMHIKQEPIDQEETSRSRCTPP 688
>tr|Q29CZ5|Q29CZ5_DROPS GA19866 OS=Drosophila pseudoobscura pseudoobscura GN=GA19866 PE=4 SV=2 Length = 563
Score = 33.1 bits (74), Expect = 7.1 Identities = 25/97 (25%), Positives = 37/97 (38%) Frame = -2
Query: 369 AQEREQHLTRRPRKQSTITTLEMVNLKPLQSIARFGNHMQLHHAMMSQLHRSNLGRIGTA 190 A ER+ RR + + +E + + + G H Q ++S + R Sbjct: 161 ALERQAERDRRIYHEQVLNGIEEAQRRRAERCQQLGEHKQ---DLLSAIAEREKERQAAK 217
Query: 189 WRRHTGCRDRTFHRNQRRLHSLHHRQQGASTSERRQK 79 H R RNQR+L R + TS RRQK Sbjct: 218 AEEHEQARQER-ERNQRQLREQQRRDEEVRTSRRRQK 253
>tr|B5E139|B5E139_DROPS GA24574 OS=Drosophila pseudoobscura pseudoobscura GN=GA24574 PE=4 SV=1 Length = 824
Score = 33.1 bits (74), Expect = 7.1 Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 6/114 (5%) Frame = -2
Query: 387 EHNRRHAQEREQHLTRRPRKQSTITTLEMVNLKPLQSIARFGNHMQLHHAMMSQLHRSNL 208 ++ R+H Q + QH + + Q L + K Q ++ + + + S SN Sbjct: 323 DNQRKHQQRQRQHEHEQEQTQEMQQMLRRQSHKKAQGETKYRRLLIIDSSSSSSSSNSNS 382
Query: 207 GRIGTAWRRHTGCR------DRTFHRNQRRLHSLHHRQQGASTSERRQKTRSTA 64 R +G R +R HRN + H GA+ S + KT + A Sbjct: 383 NSQELPTARRSGGRVEMTGYERRRHRNNQGKHFTRSMTTGANDSSKADKTPAQA 436
>tr|B4JPU5|B4JPU5_DROGR GH13335 OS=Drosophila grimshawi GN=GH13335 PE=4 SV=1 Length = 955
Score = 33.1 bits (74), Expect = 7.1 Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 5/114 (4%) Frame = -2
Query: 387 EHNRRHAQEREQHLTRRP----RKQSTITTLEMVNLKPLQSIAR-FGNHMQLHHAMMSQL 223 + ++H ++++QH + P +KQ + + + A +G H Q HH S Sbjct: 437 QQQQQHQEQQQQHRQQSPQKSNQKQPNVNQFKQ-KVNAFNKFANGYGGHQQQHHQQQSLR 495
Query: 222 HRSNLGRIGTAWRRHTGCRDRTFHRNQRRLHSLHHRQQGASTSERRQKTRSTAP 61 + + R T+ T + ++ +R S R + S S R ++ S +P Sbjct: 496 YSRSRSRSPTSSSTSTASK---YNNRKRYSRSRSTRSRSRSRSPSRSRSSSASP 546
>tr|B4HH60|B4HH60_DROSE GM26621 OS=Drosophila sechellia GN=GM26621 PE=4 SV=1 Length = 2358
Score = 32.7 bits (73), Expect = 9.3 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 1/99 (1%) Frame = -2
Query: 384 HNRRHAQERE-QHLTRRPRKQSTITTLEMVNLKPLQSIARFGNHMQLHHAMMSQLHRSNL 208 H R Q R QHL + Q L +K G+H Q HH +Q HR + Sbjct: 402 HRRGPKQRRSNQHLEHEAKLQRLKEELSRPVIK--------GHHRQSHHQKQAQ-HRQH- 451
Query: 207 GRIGTAWRRHTGCRDRTFHRNQRRLHSLHHRQQGASTSE 91 ++ HR + R HHR++G ST++ Sbjct: 452 --------------HQSHHRKKHRRQQQHHRRRGQSTTQ 476
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