NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945896
Clone id YMU02A01NGRL0010_M24
Library
Length 600
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_M24. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
CCAGAGCTCCAGATTAGCAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCC
ATCTCCATAGCCGCTTCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTG
TCAAAGAGCTTCTCTGGTCTCAAGGCCACTACCCTGCTCGCCCCCAAGAGCCCCAACCCG
CTCGCCATCTCTAATGGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAAC
AAGAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAG
GTGGACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGC
GTGTACCGAGAGCACTTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGG
AAGCTGCCCATGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGC
GCCAAGGAGTATCCTGAAGCCTTCATCCGCGTGCTGGGCTTTGACGCTAAGAGGCAGGTG
CAGGTCTCCGGCTTCCTTGTCCAGAAGCCCTCTGTCTAAACTTTCTTAAAGCAAGCCAAT
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 156
Score (bit) 184.0
E-value 3.0e-46
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945896|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_M24, 5'
         (600 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   184   3e-46
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   182   1e-45
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   180   6e-45
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   180   6e-45
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   179   7e-45
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   178   2e-44
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   178   2e-44
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   178   2e-44
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   178   2e-44
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   178   2e-44
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   178   2e-44
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   178   2e-44
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   177   3e-44
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   177   3e-44
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   177   3e-44
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   177   4e-44
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   177   5e-44
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   177   5e-44
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   177   5e-44
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   176   6e-44
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   176   6e-44
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   176   1e-43
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   176   1e-43
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   176   1e-43
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   176   1e-43
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   176   1e-43
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   174   2e-43
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   174   3e-43
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   173   5e-43
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   173   5e-43

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  184 bits (467), Expect = 3e-46
 Identities = 87/156 (55%), Positives = 110/156 (70%), Gaps = 5/156 (3%)
 Frame = +1

Query: 118 LSKSFSGLKATTL--LAPKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 285
           L+  F+GLK+     +  K+ N  +   SNG RV  M VW P   KK+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 286 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 462
            ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V+
Sbjct: 82  ALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 463 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 570
           +E+ EC KEYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 142 KEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  182 bits (461), Expect = 1e-45
 Identities = 88/152 (57%), Positives = 110/152 (72%), Gaps = 5/152 (3%)
 Frame = +1

Query: 130 FSGLKATTL--LAPKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 297
           F+ LK+T+   +  K+ N +    SNG RV  M VW P   KKFETLSYLPPLSSEQ+AK
Sbjct: 28  FTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAK 87

Query: 298 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474
           +VD+++RK   PC+EF+ + G VYREH    GYYDGRYW MWKLPMFGC D++ VL+E+ 
Sbjct: 88  EVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELE 147

Query: 475 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 570
           EC K YP AFIR++GFD KRQVQ+  F+  KP
Sbjct: 148 ECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  180 bits (456), Expect = 6e-45
 Identities = 86/152 (56%), Positives = 106/152 (69%), Gaps = 4/152 (2%)
 Frame = +1

Query: 130 FSGLKATTLLAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 297
           F+GL+++       K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 298 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 477
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 478 CAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 573
             K YPE F+R++GFD KRQVQ   F+  KP+
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  180 bits (456), Expect = 6e-45
 Identities = 86/152 (56%), Positives = 106/152 (69%), Gaps = 4/152 (2%)
 Frame = +1

Query: 130 FSGLKATTLLAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 297
           F+GL+++       K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 298 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 477
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 478 CAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 573
             K YPE F+R++GFD KRQVQ   F+  KP+
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  179 bits (455), Expect = 7e-45
 Identities = 78/127 (61%), Positives = 96/127 (75%)
 Frame = +1

Query: 190 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 369
           SNG RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD+++R GW PCIEF K+G VYR
Sbjct: 49  SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYR 108

Query: 370 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 549
           E+ +  GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++GFD  RQVQ  
Sbjct: 109 EYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCI 168

Query: 550 GFLVQKP 570
            FL  KP
Sbjct: 169 SFLTYKP 175


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  178 bits (452), Expect = 2e-44
 Identities = 85/156 (54%), Positives = 107/156 (68%), Gaps = 8/156 (5%)
 Frame = +1

Query: 127 SFSGLKATTLLAP--KSPNPLA------ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 282
           +F+GLK+T       K  N  A       SNG RV  M VW P+ N KFETLSYLP L+ 
Sbjct: 15  AFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTE 74

Query: 283 EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 462
           EQ+ K+V++++R  W PC+EFD  GS+ R++    GYYDGRYWVMWKLPMFGC +A+ V+
Sbjct: 75  EQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVI 134

Query: 463 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 570
            E+ ECAK YP+AFIRV+GFD  RQVQ   F+V KP
Sbjct: 135 NEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  178 bits (452), Expect = 2e-44
 Identities = 85/149 (57%), Positives = 106/149 (71%), Gaps = 1/149 (0%)
 Frame = +1

Query: 133 SGLKATTLLAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFM 312
           +GLKA              +NGSRVS M VW+PY+N KFETLSYLPPLS + +AKQ+D++
Sbjct: 32  AGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYV 91

Query: 313 VRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEY 492
           ++ GW PCIEFD  G+V RE     GYYDGRYW MWKLPMFGC D+A+VLREI EC K Y
Sbjct: 92  IKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLY 151

Query: 493 -PEAFIRVLGFDAKRQVQVSGFLVQKPSV 576
             + +IR LGFD  RQVQ + F+V +P++
Sbjct: 152 GKKCYIRCLGFDNTRQVQCASFIVHQPTL 180


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  178 bits (452), Expect = 2e-44
 Identities = 84/150 (56%), Positives = 103/150 (68%), Gaps = 3/150 (2%)
 Frame = +1

Query: 130 FSGLKATTLL--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 300
           F GLK+T  L  A +S   L  +SNG R+  M VW  Y NKKFETLSYLPPLS++ + KQ
Sbjct: 17  FQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ 76

Query: 301 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 480
           VD+++R GW PC+EF K+G VYRE+     YYDGRYW MWKLPMFGC DA  V +E+ E 
Sbjct: 77  VDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEA 136

Query: 481 AKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 570
            K YP+AF RV+GFD  +Q Q   F+  KP
Sbjct: 137 IKSYPDAFHRVIGFDNIKQTQCVSFIAYKP 166


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score =  178 bits (451), Expect = 2e-44
 Identities = 85/157 (54%), Positives = 111/157 (70%), Gaps = 4/157 (2%)
 Frame = +1

Query: 118 LSKSFSGLKATT-LLAPKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQ 288
           L+  F+GLK++      K  N +    SNGSRV+ M VW P   KKFETLSYLPPL+ EQ
Sbjct: 21  LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80

Query: 289 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 465
           + K+V++++RKGW PC+EF+ + G V+R++    GYYDGRYW MW+LP+FG  DAA VL+
Sbjct: 81  LLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLK 140

Query: 466 EIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPSV 576
           E+AEC  EYPEAFIR++GFD  RQVQ   F+   P V
Sbjct: 141 EVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTPKV 177


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Hordeum vulgare PE=2 SV=1
          Length = 174

 Score =  178 bits (451), Expect = 2e-44
 Identities = 81/150 (54%), Positives = 103/150 (68%), Gaps = 3/150 (2%)
 Frame = +1

Query: 130 FSGLKATTLLAPK---SPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 300
           F GLK+T  L      + +  ++SNG R+  M VW     KKFETLSYLPPLS+E + KQ
Sbjct: 16  FQGLKSTAGLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQ 75

Query: 301 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 480
           VD+++R  W PC+EF K+G ++REH    GYYDGRYW MWKLPMFGC DA  VL E+ E 
Sbjct: 76  VDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEV 135

Query: 481 AKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 570
            KEYP+A++R++GFD  RQVQ   F+  KP
Sbjct: 136 KKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 165
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 152
Score (bit) 286.0
E-value 5.0e-76
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945896|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_M24, 5'
         (600 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   286   5e-76
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   201   2e-50
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   201   4e-50
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   197   3e-49
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   197   3e-49
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   197   3e-49
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   195   2e-48
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   188   2e-46
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   188   2e-46
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   188   2e-46
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   186   7e-46
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   185   2e-45
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   185   2e-45
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   184   3e-45
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   184   3e-45
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   183   8e-45
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   183   8e-45
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   182   1e-44
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   182   1e-44
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   182   1e-44
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   182   2e-44
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   182   2e-44
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c...   180   5e-44
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c...   180   5e-44
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   180   6e-44
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   180   6e-44
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c...   179   8e-44
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   179   8e-44
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   179   1e-43
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   179   1e-43

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  286 bits (733), Expect = 5e-76
 Identities = 133/152 (87%), Positives = 144/152 (94%)
 Frame = +1

Query: 118 LSKSFSGLKATTLLAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 297
           LSKSFSGLKA TL APK  NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 298 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 477
           QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAE
Sbjct: 82  QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAE 141

Query: 478 CAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 573
           CAKEYP AFIRVLGFDAKRQVQV+GFLV+KPS
Sbjct: 142 CAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  201 bits (512), Expect = 2e-50
 Identities = 94/153 (61%), Positives = 115/153 (75%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 KSFSGLKATTLLAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
           K FSGLK+TTL A K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 475 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 573
           EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  201 bits (510), Expect = 4e-50
 Identities = 94/153 (61%), Positives = 115/153 (75%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 KSFSGLKATTLLAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
           K FSGLK+TTL A K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 475 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 573
           EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  197 bits (502), Expect = 3e-49
 Identities = 90/153 (58%), Positives = 115/153 (75%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 KSFSGLKATTLLAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
           K+FSGLK+ TL + K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 475 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 573
           EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  197 bits (502), Expect = 3e-49
 Identities = 91/153 (59%), Positives = 113/153 (73%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 KSFSGLKATTLLAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
           K+FSGLK+ TL   KS    ++ NGSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 475 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 573
           EC   YP  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  197 bits (502), Expect = 3e-49
 Identities = 91/153 (59%), Positives = 114/153 (74%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 KSFSGLKATTLLAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
           K+FSGLK  TL + K+    A+ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 475 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 573
           EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  195 bits (495), Expect = 2e-48
 Identities = 88/153 (57%), Positives = 115/153 (75%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 KSFSGLKATTLLAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
           K+FSGLK+ TL + ++    ++ NGSRV  M VW P    KFET SYLPPL+ ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 475 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 573
           EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  188 bits (478), Expect = 2e-46
 Identities = 86/150 (57%), Positives = 108/150 (72%)
 Frame = +1

Query: 124 KSFSGLKATTLLAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
           K+FSGLK+ T+ + K+ N  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 483
           ++M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD+A VLREI EC 
Sbjct: 92  EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 484 KEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 573
           K +P  F+RVLGFD  +QVQ+ GFLV +P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score =  188 bits (477), Expect = 2e-46
 Identities = 87/150 (58%), Positives = 108/150 (72%)
 Frame = +1

Query: 124 KSFSGLKATTLLAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
           K+FSGLK++TL + K+ +  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 483
           D+M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD A VLREI EC 
Sbjct: 92  DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151

Query: 484 KEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 573
           K +P  F+RVLGFD  +QVQ+ GFLV +P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_123666 PE=3 SV=1
          Length = 181

 Score =  188 bits (477), Expect = 2e-46
 Identities = 87/150 (58%), Positives = 109/150 (72%)
 Frame = +1

Query: 124 KSFSGLKATTLLAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
           K+FSGLK+ TL + +S    ++ NGSRV+ M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 483
           ++M+++   PC+EFD    V RE+    GYYDGRYW MWKLPMFGCQD+A VLREI EC 
Sbjct: 92  EYMIQQKLIPCLEFDNSKGVTRENNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 484 KEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 573
           K +P  F+RVLGFD  +QVQ+ GFLV +P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181