DK945912
Clone id YMU02A01NGRL0010_N23
Library
Length 340
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_N23. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GTTCACAGAACTCCCTCACGTTCCTTTGCTTCGAAACGAGGGTAGGCACACCAGACACAA
AATTGAGTGATGCGTAATACGGACGGAGGTTCGAATCCTCGCAAGGCGTCCGGAACAAAA
GTCGTCTTGCATTTCCGGAATAAGTCTCCCGACCCCTTGCTTTCCACCAAGAGAAAGCAA
AAAGAACCCGGGCGGGAAAGTTTGATTTGGTCAATCTCCTTGCCCCTCCGAACTAAGTGG
CGACGAAACCGATCTTCGTATCGAGATGCGGGTGGGTCCTGTTGCTTCGGTGTCCCCCGA
AGCTAAATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6NRW0
Definition sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis
Align length 75
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945912|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_N23, 5'
(310 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis GN=m... 31 1.7
sp|A1DNV8|YD156_NEOFI WD repeat-containing protein NFIA_058290 O... 30 2.9
sp|Q0P4G8|MTBP_XENTR Mdm2-binding protein OS=Xenopus tropicalis ... 30 2.9
sp|Q6PJG2|CN043_HUMAN Uncharacterized protein C14orf43 OS=Homo s... 30 3.7
sp|Q6A7M3|Y1495_PROAC UPF0090 protein PPA1495 OS=Propionibacteri... 30 4.9
sp|Q7TQN7|GP135_RAT Probable G-protein coupled receptor 135 OS=R... 30 4.9
sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic ... 29 6.4
sp|O05528|FLII_CAUCR Flagellum-specific ATP synthase OS=Caulobac... 29 6.4

>sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis GN=mtbp
PE=2 SV=1
Length = 860

Score = 31.2 bits (69), Expect = 1.7
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -3

Query: 278 DPPA-SRYEDRFRRHLVRRGKEIDQIKLSRPGSFC--FLLVESKGSGDLFRKCKTTFVPD 108
+PPA R ++R ++ R+ K+I + G +C + L++ KGSG CK T +
Sbjct: 335 NPPALQRSSKKWREYMSRKPKDIKVPGVELKGEYCSYYFLIQGKGSG----LCKATLLHS 390

Query: 107 ALRGFEPPSVLRITQ 63
A + S+L + Q
Sbjct: 391 ASQISGAASLLLLHQ 405


>sp|A1DNV8|YD156_NEOFI WD repeat-containing protein NFIA_058290
OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
NRRL 181) GN=NFIA_058290 PE=3 SV=1
Length = 527

Score = 30.4 bits (67), Expect = 2.9
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2

Query: 161 FPPRESKKNPGGKV*FGQSPCPSELSGDETDL---RIEMRVGPVASVSPEAK 307
FPP+ ++ +PGG + P P ++ ++ DL R+ R+ +A+ S AK
Sbjct: 38 FPPKSARSSPGGLTKPKKKPAPKKVKKEDEDLVPRRMSSRLRGLAADSEVAK 89


>sp|Q0P4G8|MTBP_XENTR Mdm2-binding protein OS=Xenopus tropicalis
GN=mtbp PE=2 SV=2
Length = 867

Score = 30.4 bits (67), Expect = 2.9
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -3

Query: 278 DPPA-SRYEDRFRRHLVRRGKEIDQIKLSRPGSFC--FLLVESKGSGDLFRKCKTTFVPD 108
+PPA R ++R ++ R+ K+I + G +C + L++ KGSG CK T +
Sbjct: 339 NPPALQRSSKKWREYMSRKPKDIKVPGVELKGEYCSYYFLIQGKGSG----FCKATLLHS 394

Query: 107 A 105
A
Sbjct: 395 A 395


>sp|Q6PJG2|CN043_HUMAN Uncharacterized protein C14orf43 OS=Homo
sapiens GN=C14orf43 PE=1 SV=2
Length = 1045

Score = 30.0 bits (66), Expect = 3.7
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1

Query: 73 RNTDGGSNPRK---ASGTKVVLHFRNKSPDPLLSTKRKQKEPGRESLIWSISLPLRT 234
++ G RK AS TK + F +P L+TKR +++ G LI +S+P+RT
Sbjct: 483 KDGSGSEEKRKSVLASTTKCGVEFS----EPSLATKRAREDSGMVPLIIPVSVPVRT 535


>sp|Q6A7M3|Y1495_PROAC UPF0090 protein PPA1495 OS=Propionibacterium
acnes GN=PPA1495 PE=3 SV=1
Length = 178

Score = 29.6 bits (65), Expect = 4.9
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2

Query: 131 ISGISLPTPCFPPRESKKNPGGKV*FGQSPCPSELSGDETDLRIEMRVGPVASVSPEAKS 310
+S + TP PR ++N G V F +P + SG+ D RI V ++ EA++
Sbjct: 80 VSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFDGRIAEAGEEVVTLEVEAEN 139


>sp|Q7TQN7|GP135_RAT Probable G-protein coupled receptor 135
OS=Rattus norvegicus GN=Gpr135 PE=2 SV=1
Length = 457

Score = 29.6 bits (65), Expect = 4.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 9/48 (18%)
Frame = +1

Query: 91 SNPRKASGTKVV---------LHFRNKSPDPLLSTKRKQKEPGRESLI 207
SNP SG +VV L FR PDP+++ ++ K R+S I
Sbjct: 410 SNPASGSGGEVVMWARKNPVVLFFREDPPDPVMAVYKQHKSETRDSSI 457


>sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2
Length = 732

Score = 29.3 bits (64), Expect = 6.4
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = -2

Query: 225 GQGD*PNQTFPPGFFLLSLGGKQGV----GRLIPEMQDDFCSGR 106
G+G PNQ PP F L +G QG G P +Q F GR
Sbjct: 538 GRGVGPNQQIPPNFQGLPMGAMQGPGIPNGMGYPMVQGQFGGGR 581


>sp|O05528|FLII_CAUCR Flagellum-specific ATP synthase OS=Caulobacter
crescentus GN=fliI PE=3 SV=2
Length = 444

Score = 29.3 bits (64), Expect = 6.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2

Query: 206 FGQSPCPSELSGDETDLRIEMRVGPVASVSPEAK 307
FGQ P P+E+ G + M GPV V P A+
Sbjct: 48 FGQKPLPAEVVGFRETRALLMPFGPVEGVGPGAE 81


tr_hit_id Q7UIE7
Definition tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein OS=Rhodopirellula baltica
Align length 41
Score (bit) 35.4
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945912|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_N23, 5'
(310 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein OS=Rhodo... 35 1.4
tr|B8HLS9|B8HLS9_9CHRO Metallophosphoesterase OS=Cyanothece sp. ... 35 1.4
tr|B6KNM5|B6KNM5_TOXGO Putative uncharacterized protein OS=Toxop... 35 2.5
tr|Q07YM3|Q07YM3_SHEFN ATP synthase A chain OS=Shewanella frigid... 34 4.2
tr|Q851X6|Q851X6_ORYSJ Putative uncharacterized protein OSJNBa00... 33 7.2
tr|Q10AH3|Q10AH3_ORYSJ Os03g0852300 protein OS=Oryza sativa subs... 33 7.2
tr|A3APU5|A3APU5_ORYSJ Putative uncharacterized protein OS=Oryza... 33 7.2
tr|A7F0J5|A7F0J5_SCLS1 Putative uncharacterized protein OS=Scler... 33 9.3

>tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein
OS=Rhodopirellula baltica GN=RB12581 PE=4 SV=1
Length = 174

Score = 35.4 bits (80), Expect = 1.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1

Query: 127 LHFRNKSPDPLLSTKRKQKEPGRESLIWSISLPLRTKWRRN 249
L RN+SP+PLL T + K R + W+ +R WR +
Sbjct: 133 LDARNRSPNPLLKTSWRMKANSRSRITWTPKTKIRDGWRNS 173


>tr|B8HLS9|B8HLS9_9CHRO Metallophosphoesterase OS=Cyanothece sp. PCC
7425 GN=Cyan7425_1187 PE=4 SV=1
Length = 243

Score = 35.4 bits (80), Expect = 1.4
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Frame = -1

Query: 229 GGARRLTKSNFPAR---VLFAFSWWKARGRETYSGNARRLLFRTPCEDSNLRPYYASLNF 59
G + S FP + L SW + GRET +G R LF E PY+ L
Sbjct: 66 GNHELMMLSAFPQQSEHTLHLLSWLSSGGRETIAGYTSRDLFLEHMEWMQTLPYFLDLGD 125

Query: 58 V----SGV-PTLVSKQRNVREFC 5
+ +GV PTL ++ EFC
Sbjct: 126 IWLVHAGVEPTLPLAEQTTEEFC 148


>tr|B6KNM5|B6KNM5_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_053930 PE=4 SV=1
Length = 1857

Score = 34.7 bits (78), Expect = 2.5
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2

Query: 128 CISGISLPTPCFPPRESKKNPGGKV*FGQSPCP 226
C+ G S PTPC P + PGG+ G SPCP
Sbjct: 52 CLEGASEPTPC-PAGTFRDQPGGEALDGCSPCP 83


>tr|Q07YM3|Q07YM3_SHEFN ATP synthase A chain OS=Shewanella
frigidimarina (strain NCIMB 400) GN=Sfri_3053 PE=3 SV=1
Length = 246

Score = 33.9 bits (76), Expect = 4.2
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = -3

Query: 281 QDPPASRYEDRFRRHLVRRGKEIDQIKLSRPGSFCFLLVESKGSGDLFRKCKTTFVPDAL 102
+D SR+++ ++ K+I+++ LS P + L G LF T+ + +
Sbjct: 45 KDMQRSRWQNLLEVVVITISKQIEEVGLSNPHKYLGFL------GSLFLFIATSAICTVI 98

Query: 101 RGFEPP----SVLRITQFCVWCAYPRFEAKEREGV 9
GFEPP S CV+ A P F E++G+
Sbjct: 99 PGFEPPTGSLSSTVALALCVFVAVPMF-GIEKQGL 132


>tr|Q851X6|Q851X6_ORYSJ Putative uncharacterized protein
OSJNBa0015N08.25 OS=Oryza sativa subsp. japonica
GN=OSJNBa0015N08.25 PE=4 SV=1
Length = 289

Score = 33.1 bits (74), Expect = 7.2
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +1

Query: 97 PRKASGTKVVLHFR----NKSPDPLLSTKRKQ--KEPGRESLIWSISLPLRTKWRRNRSS 258
PRK G K R + P P K+K+ KEP RE S P+ T ++N+ +
Sbjct: 89 PRKHKGAKSEKPHRVSGEGEKPTPTKKKKKKESSKEPKREKQ--QASAPMSTPSKKNKEA 146

Query: 259 YRDAGGS 279
RD GG+
Sbjct: 147 KRDTGGA 153


>tr|Q10AH3|Q10AH3_ORYSJ Os03g0852300 protein OS=Oryza sativa subsp.
japonica GN=Os03g0852300 PE=2 SV=1
Length = 303

Score = 33.1 bits (74), Expect = 7.2
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +1

Query: 97 PRKASGTKVVLHFR----NKSPDPLLSTKRKQ--KEPGRESLIWSISLPLRTKWRRNRSS 258
PRK G K R + P P K+K+ KEP RE S P+ T ++N+ +
Sbjct: 89 PRKHKGAKSEKPHRVSGEGEKPTPTKKKKKKESSKEPKREKQ--QASAPMSTPSKKNKEA 146

Query: 259 YRDAGGS 279
RD GG+
Sbjct: 147 KRDTGGA 153


>tr|A3APU5|A3APU5_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_012817 PE=4 SV=1
Length = 227

Score = 33.1 bits (74), Expect = 7.2
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +1

Query: 97 PRKASGTKVVLHFR----NKSPDPLLSTKRKQ--KEPGRESLIWSISLPLRTKWRRNRSS 258
PRK G K R + P P K+K+ KEP RE S P+ T ++N+ +
Sbjct: 89 PRKHKGAKSEKPHRVSGEGEKPTPTKKKKKKESSKEPKREKQ--QASAPMSTPSKKNKEA 146

Query: 259 YRDAGGS 279
RD GG+
Sbjct: 147 KRDTGGA 153


>tr|A7F0J5|A7F0J5_SCLS1 Putative uncharacterized protein
OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 /
Ss-1) GN=SS1G_11113 PE=4 SV=1
Length = 557

Score = 32.7 bits (73), Expect = 9.3
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Frame = -1

Query: 193 ARVLFAFSWWKARGRETYSGNARRLLFRTPCE-----DSNLRPYYASLN 62
A +F+F WW A R TY+G + L ++ +S+ RP Y S+N
Sbjct: 507 AIAVFSFGWWWAGARRTYTGPKTKDLIQSIATEEGNYESDQRPDYGSMN 555